PI0018834 (gene) Melon (PI 482460) v1

Overview


Name	PI0018834
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	major pollen allergen Ole e 6-like
Location	chr11: 2021200 .. 2021955 (-)
RNA-Seq Expression	PI0018834
Synteny	PI0018834

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCTCTCTCAAAAGAAAGACTTCCAACACATCACCAAAGGCAAGAATTAATAATAAATAAAACACCAAAGCCAAAAACCAAAAACAAGAGGAAAAAAATATGGGCAAGAAAATGATGGCAGTGTTTTTGATGTGCATTGTGGTGGTAGCTACTTTGCAATTTGCCATTGCCAATGAGGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTCAAAATGGCAATAATGGCCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGACGAAAAAGAAGTCGCTGGTACTACTCTCTTTATACCTTATAACTTTTGTACAAATTACGTTAAATTATTTCTTTTACCATTTCTATCAACATTTCACACGTTGATCAGTCCCAGGACCATACAAAAGATGATGCATCAACATTTCTATTACATCATAGAAAATAAAGAACAATATATAACAATAATATAAGCTAAAATTGTGAATTTAAACATTTTTGTGCATTTTTTATTCTTAAATTTTTAGAGAAATTTTTATTTATTATATTACTTTCATTGTTGTATTTGTTTTTCACAGATAAATTGCACATCGAATTGCATTGAATGATGGGGGGCAAAAAGAAAGAAGACCTCTTGAGAAGGATCAAGTAGTAAAATTGTATCAAATTCGAGCTTGTAATTTGATTTTAATATTAAAATTTATAAAAATTTTGGTCTTTGGTG

mRNA sequence

ATCCTCTCTCAAAAGAAAGACTTCCAACACATCACCAAAGGCAAGAATTAATAATAAATAAAACACCAAAGCCAAAAACCAAAAACAAGAGGAAAAAAATATGGGCAAGAAAATGATGGCAGTGTTTTTGATGTGCATTGTGGTGGTAGCTACTTTGCAATTTGCCATTGCCAATGAGGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTCAAAATGGCAATAATGGCCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGACGAAAAAGAAGTCGCTGATAAATTGCACATCGAATTGCATTGAATGATGGGGGGCAAAAAGAAAGAAGACCTCTTGAGAAGGATCAAGTAGTAAAATTGTATCAAATTCGAGCTTGTAATTTGATTTTAATATTAAAATTTATAAAAATTTTGGTCTTTGGTG

Coding sequence (CDS)

ATGGGCAAGAAAATGATGGCAGTGTTTTTGATGTGCATTGTGGTGGTAGCTACTTTGCAATTTGCCATTGCCAATGAGGAGGATGAGGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTCAAAATGGCAATAATGGCCAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTGACGAAAAAGAAGTCGCTGATAAATTGCACATCGAATTGCATTGA

Protein sequence

MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQSFCEVKCDEDCDEKEVADKLHIELH

Homology

[Close]

BLAST of PI0018834 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-07
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0


Query: 38 DAKYKSCYETCEKECLQNGNNGQSFCEVKCDEDCDEKEVADKL 81
          +A++K CY+TC KEC   G NG +FCE+KCD DC  K+V +KL
Sbjct: 2  EAQFKECYDTCHKECSDKG-NGFTFCEMKCDTDCSVKDVKEKL 43

[Close]

BLAST of PI0018834 vs. ExPASy TrEMBL
Match: A0A0A0K9Z9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-34
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKMMAVFLMCIVVVATLQF +ANEED VTKYEAKFDAKYKSCYETCEKECL+N  NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIELH 86
          SFCEVKCDEDC EKE ADKLHIELH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]

BLAST of PI0018834 vs. ExPASy TrEMBL
Match: A0A5A7TDR1 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002630 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.3e-32
Identity = 73/84 (86.90%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKMMAVFLMCIV+VATLQFAIA EEDEVTKYEAKFDAKYKSCYETCEKECLQ GNNGQ
Sbjct: 1  MAKKMMAVFLMCIVLVATLQFAIAKEEDEVTKYEAKFDAKYKSCYETCEKECLQKGNNGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIEL 85
          SFCEVKCDEDC EKE A  L + L
Sbjct: 61 SFCEVKCDEDCSEKEAAGILLLSL 84

[Close]

BLAST of PI0018834 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.5e-32
Identity = 71/85 (83.53%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKM+A+FLMCIVVVA LQFA AN+EDEV KYEAKFDAKYKSC++TCEKECL+NG +GQ
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENG-SGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIELH 86
          S+CEVKCDEDC+EKEVADKLHIELH
Sbjct: 61 SYCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of PI0018834 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 9.5e-32
Identity = 71/85 (83.53%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKM+A+FLMCIVVVA LQFA AN+EDEV KYEAKFDAKYKSC++TCEKECL+NG +GQ
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENG-SGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIELH 86
          S+CEVKCDEDC+EKEVADKLHIELH
Sbjct: 61 SYCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of PI0018834 vs. ExPASy TrEMBL
Match: A0A5D3DM52 (Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002640 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 8.9e-30
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKMM V L+CIVV+A L+F+IAN E++  KYE+KFDAKYKSCYE+CEKECLQNGNNGQ
Sbjct: 1  MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIE 84
          SFCEVKCDEDCDEKEVADKL I+
Sbjct: 61 SFCEVKCDEDCDEKEVADKLRID 83

[Close]

BLAST of PI0018834 vs. NCBI nr
Match: KGN46520.1 (hypothetical protein Csa_005728 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 2.5e-34
Identity = 75/85 (88.24%), Postives = 78/85 (91.76%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKMMAVFLMCIVVVATLQF +ANEED VTKYEAKFDAKYKSCYETCEKECL+N  NG+
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGE 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIELH 86
          SFCEVKCDEDC EKE ADKLHIELH
Sbjct: 61 SFCEVKCDEDCSEKEAADKLHIELH 85

[Close]

BLAST of PI0018834 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 149.1 bits (375), Expect = 1.8e-32
Identity = 77/85 (90.59%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKMMAVFLMCIVVVA LQFA AN EDEVTKYEAKFDAKYKSCYETCEKECL NG +GQ
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATAN-EDEVTKYEAKFDAKYKSCYETCEKECLANG-SGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIELH 86
          SFCEVKCDEDCDEKEVADKLHI+LH
Sbjct: 61 SFCEVKCDEDCDEKEVADKLHIKLH 83

[Close]

BLAST of PI0018834 vs. NCBI nr
Match: KAA0039791.1 (carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa] >TYK24706.1 carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa])

HSP 1 Score: 146.7 bits (369), Expect = 8.8e-32
Identity = 73/84 (86.90%), Postives = 75/84 (89.29%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKMMAVFLMCIV+VATLQFAIA EEDEVTKYEAKFDAKYKSCYETCEKECLQ GNNGQ
Sbjct: 1  MAKKMMAVFLMCIVLVATLQFAIAKEEDEVTKYEAKFDAKYKSCYETCEKECLQKGNNGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIEL 85
          SFCEVKCDEDC EKE A  L + L
Sbjct: 61 SFCEVKCDEDCSEKEAAGILLLSL 84

[Close]

BLAST of PI0018834 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 145.6 bits (366), Expect = 2.0e-31
Identity = 71/85 (83.53%), Postives = 80/85 (94.12%), Query Frame = 0


Query: 1  MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
          M KKM+A+FLMCIVVVA LQFA AN+EDEV KYEAKFDAKYKSC++TCEKECL+NG +GQ
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENG-SGQ 60

Query: 61 SFCEVKCDEDCDEKEVADKLHIELH 86
          S+CEVKCDEDC+EKEVADKLHIELH
Sbjct: 61 SYCEVKCDEDCNEKEVADKLHIELH 84

[Close]

BLAST of PI0018834 vs. NCBI nr
Match: XP_016902456.1 (PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 139.0 bits (349), Expect = 1.8e-29
Identity = 66/83 (79.52%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 1   MGKKMMAVFLMCIVVVATLQFAIANEEDEVTKYEAKFDAKYKSCYETCEKECLQNGNNGQ 60
           M KKMM V L+CIVV+A L+F+IAN E++  KYE+KFDAKYKSCYE+CEKECLQNGNNGQ
Sbjct: 584 MAKKMMGVLLICIVVMAALEFSIANGEEKKDKYESKFDAKYKSCYESCEKECLQNGNNGQ 643

Query: 61  SFCEVKCDEDCDEKEVADKLHIE 84
           SFCEVKCDEDCDEKEVADKL I+
Sbjct: 644 SFCEVKCDEDCDEKEVADKLRID 666

The following BLAST results are available for this feature:

BLAST of PI0018834 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	2.1e-07	55.81	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of PI0018834 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9Z9	1.2e-34	88.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1	[more]
A0A5A7TDR1	4.3e-32	86.90	Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3BCS2	9.5e-32	83.53	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	9.5e-32	83.53	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]
A0A5D3DM52	8.9e-30	79.52	Carotenoid cleavage dioxygenase 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of PI0018834 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46520.1	2.5e-34	88.24	hypothetical protein Csa_005728 [Cucumis sativus]	[more]
XP_038891517.1	1.8e-32	90.59	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]
KAA0039791.1	8.8e-32	86.90	carotenoid cleavage dioxygenase 7 [Cucumis melo var. makuwa] >TYK24706.1 caroten...	[more]
XP_008456958.1	2.0e-31	83.53	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]
XP_016902456.1	1.8e-29	79.52	PREDICTED: carotenoid cleavage dioxygenase 7, chloroplastic isoform X1 [Cucumis ...	[more]

BLAST of PI0018834 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 16..36
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..85
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 38..83 e-value: 2.7E-15 score: 57.6
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 38..80
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 44..81 e-value: 9.0E-12 score: 44.7
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..85

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018834.1	PI0018834.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016121	carotene catabolic process
biological_process	GO:0009733	response to auxin
biological_process	GO:0010223	secondary shoot formation
biological_process	GO:1901601	strigolactone biosynthetic process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen