PI0018802 (gene) Melon (PI 482460) v1

Overview


Name	PI0018802
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ferredoxin
Location	chr06: 4140685 .. 4142203 (+)
RNA-Seq Expression	PI0018802
Synteny	PI0018802

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGAACCTTATCTCTTCATCAACGCCCTCGAATGGTCACAACCTCACAAATTACCTCCTTTTCAATTCATCCCTAAGCAGAGAAAAGAAAACAATGGCAACTCTTCATTTTATTCCTTCCGCTTTCTCTCTACCAAAACAAAAGCAACCCATCAAGCTTTCCCCGGTCAGACCTACAACTCAGATAAGCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGAGGAGAGCATATTGAGCAGTGCTTTGGACAATGGGCTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTTGTGGAACAAGGCTATTCGCTTCTGTGTGTGGCTTATCCTCGCTCAGATTGCCTCATTAAAACCATCCCTGAGGAGGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAAAATCTGAGTACTTCTTTGGATGATTTTGTAGATTTAATTTCGGTTTAGTTTATAACTATATTGAAATCAATCTATCTGGGATGTTGTCTCTTTTGGCTGTTGTTTGGTCATTTGGGTTTAATGATAAATCTCTTGATTTGATTCCAGTCAGTGGCAGATGGCAATGGATGTACATTGTTAAAGAATTCCAACCCATTTATCCATTTGGAGCTTCTAATTGTAGGAAAGTTACATATATGTATATATATTCAGATAAGATTCTGATTCTGATAGACGAGGAATTGAAGTTCTTCATAACGAATTAATGAAAAAGACTAGGCAATTTGTGCAGGGAAGTAAATAAAGAGGTTTATTAGAAAACTAGCTTCCTTCTATTGTTTCCTCTCGCCTTTTGTACTGAATTGTGGATATCATCAGCCAGCGCTTCTTGAGTCAAAACTGCTGTATAAATAGAGGAGTTCTTCCTTGAAGTCATGTCTGAATTCATGTGCTTAGAAATGGAATGTACCACAGCTACAATCTTAATTGTCACTCAGTGAATAACACGTATAACGCTATCATGCGTTGATGCATGAATTTAGACAATGTGGGCTGCCAATGTGGCGTCCAAGATAGATCTCAGTCAAGAAATGATCTTTGAGACCTGTCACGTAACCTTGTCCAGTCGTGGTGTTTGGCCACCTACACTTTAGAGCTCATTTTGTCATACTTATCAGTTCAATTGTTTCATTTGCTTGATTCGTTCGGTTATTCGAGGTTTGGTTTAAGTCAGAGAATGAACAGCGTGCTCCAATGGGTTTCGAGACATGCGTCTTTCGGTGGTTAGGTCATGTGGCAAGCTATGAGTATGGCAATGGCAATAACATAATGGCTCGTGGTAAGGACCAATAAGCTAATAAAAACACTGAGTGTTCTGAGCTTCTTCTCAATATCATGATTCTTCTTTTCACCTATTACATGTTTGTTCAGTTAGGAAGGTGTACAAGGCCATT

mRNA sequence

AGAACCTTATCTCTTCATCAACGCCCTCGAATGGTCACAACCTCACAAATTACCTCCTTTTCAATTCATCCCTAAGCAGAGAAAAGAAAACAATGGCAACTCTTCATTTTATTCCTTCCGCTTTCTCTCTACCAAAACAAAAGCAACCCATCAAGCTTTCCCCGGTCAGACCTACAACTCAGATAAGCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGAGGAGAGCATATTGAGCAGTGCTTTGGACAATGGGCTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTTGTGGAACAAGGCTATTCGCTTCTGTGTGTGGCTTATCCTCGCTCAGATTGCCTCATTAAAACCATCCCTGAGGAGGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAAAATCTGAGTACTTCTTTGGATGATTTTGTAGATTTAATTTCGGTTTAGTTTATAACTATATTGAAATCAATCTATCTGGGATGTTGTCTCTTTTGGCTGTTGTTTGGTCATTTGGGTTTAATGATAAATCTCTTGATTTGATTCCAGTCAGTGGCAGATGGCAATGGATGTACATTGTTAAAGAATTCCAACCCATTTATCCATTTGGAGCTTCTAATTGTAGGAAAGTTACATATATGTATATATATTCAGATAAGATTCTGATTCTGATAGACGAGGAATTGAAGTTCTTCATAACGAATTAATGAAAAAGACTAGGCAATTTGTGCAGGGAAGTAAATAAAGAGGTTTATTAGAAAACTAGCTTCCTTCTATTGTTTCCTCTCGCCTTTTGTACTGAATTGTGGATATCATCAGCCAGCGCTTCTTGAGTCAAAACTGCTGTATAAATAGAGGAGTTCTTCCTTGAAGTCATGTCTGAATTCATGTGCTTAGAAATGGAATGTACCACAGCTACAATCTTAATTGTCACTCAGTGAATAACACGTATAACGCTATCATGCGTTGATGCATGAATTTAGACAATGTGGGCTGCCAATGTGGCGTCCAAGATAGATCTCAGTCAAGAAATGATCTTTGAGACCTGTCACGTAACCTTGTCCAGTCGTGGTGTTTGGCCACCTACACTTTAGAGCTCATTTTGTCATACTTATCAGTTCAATTGTTTCATTTGCTTGATTCGTTCGGTTATTCGAGGTTTGGTTTAAGTCAGAGAATGAACAGCGTGCTCCAATGGGTTTCGAGACATGCGTCTTTCGGTGGTTAGGTCATGTGGCAAGCTATGAGTATGGCAATGGCAATAACATAATGGCTCGTGGTAAGGACCAATAAGCTAATAAAAACACTGAGTGTTCTGAGCTTCTTCTCAATATCATGATTCTTCTTTTCACCTATTACATGTTTGTTCAGTTAGGAAGGTGTACAAGGCCATT

Coding sequence (CDS)

ATGGCAACTCTTCATTTTATTCCTTCCGCTTTCTCTCTACCAAAACAAAAGCAACCCATCAAGCTTTCCCCGGTCAGACCTACAACTCAGATAAGCTGCTCACGGCGGCGCTTGGTGGTCCGGTCGTACAAAGTAGTGATTGAGCACGAGGGGCAGACCACCGAGCTTGAGGTCGATCCCGAGGAGAGCATATTGAGCAGTGCTTTGGACAATGGGCTAGAAATTCCTCACGATTGCAAGCTTGGAGTTTGCATGACTTGCCCTGCTCGCCTTGTCAGTGGCACCGTCGACCAAAGCGAAGGTATGTTGAGCGATGACGTTGTGGAACAAGGCTATTCGCTTCTGTGTGTGGCTTATCCTCGCTCAGATTGCCTCATTAAAACCATCCCTGAGGAGGAATTGTTGGCACTTCAATTAGCCACGGCTAATGACTAA

Protein sequence

MATLHFIPSAFSLPKQKQPIKLSPVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYPRSDCLIKTIPEEELLALQLATAND

Homology

[Close]

BLAST of PI0018802 vs. ExPASy Swiss-Prot
Match: O23344 (Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 9.4e-45
Identity = 91/144 (63.19%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 9   SAFSLPKQKQPIKLS-PVRPTTQISCSRR-------RLVVRSYKVVIEHEGQTTELEVDP 68
           S  SLPK       S P+R  T  + + R       R++ R+YKVV+EH+G+TTELEV+P
Sbjct: 11  STISLPKPYLSNSFSFPLRNATLSTTTNRRNFLTTGRIIARAYKVVVEHDGKTTELEVEP 70

Query: 69  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 128
           +E+ILS ALD+GL++P+DC LGVCMTCPA+LV+GTVDQS GMLSDDVVE+GY+LLC +YP
Sbjct: 71  DETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCASYP 130

Query: 129 RSDCLIKTIPEEELLALQLATAND 145
            SDC IK IPEEELL+LQLATAND
Sbjct: 131 TSDCHIKMIPEEELLSLQLATAND 154

[Close]

BLAST of PI0018802 vs. ExPASy Swiss-Prot
Match: P00248 (Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-19
Identity = 47/96 (48.96%), Postives = 65/96 (67.71%), Query Frame = 0


Query: 42  SYKVVI--EHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS 101
           +YKV +  E EG    +EV  ++ IL +A + G+++P+ C+ G C TC  +L+SGTVDQS
Sbjct: 3   TYKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQS 62

Query: 102 -EGMLSDDVVEQGYSLLCVAYPRSDCLIKTIPEEEL 135
            +  L DD +E GY L CVAYP SDC+I+T  EEEL
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98

[Close]

BLAST of PI0018802 vs. ExPASy Swiss-Prot
Match: P00252 (Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 2.3e-19
Identity = 47/94 (50.00%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 43  YKV-VIEHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-E 102
           YKV +++ EG  T ++V  +E IL  A D GL++P+ C+ G C TC  ++VSGTVDQS +
Sbjct: 5   YKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQ 64

Query: 103 GMLSDDVVEQGYSLLCVAYPRSDCLIKTIPEEEL 135
             L DD +E+GY L CVAYP SD  I+T  EE+L
Sbjct: 65  SFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98

[Close]

BLAST of PI0018802 vs. ExPASy Swiss-Prot
Match: P08451 (Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=petF2 PE=3 SV=2)

HSP 1 Score: 95.9 bits (237), Expect = 4.0e-19
Identity = 46/98 (46.94%), Postives = 67/98 (68.37%), Query Frame = 0


Query: 42  SYKVVIEHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG 101
           +Y+V + ++GQ+     D ++S+L SA   G+++P  C  GVC TC AR++SG VDQ + 
Sbjct: 3   TYQVEVIYQGQSQTFTADSDQSVLDSAQAAGVDLPASCLTGVCTTCAARILSGEVDQPDA 62

Query: 102 M-LSDDVVEQGYSLLCVAYPRSDCLIKTIPEEELLALQ 139
           M +  +  +QGY+LLCVAYPRSD  I+T  E+EL ALQ
Sbjct: 63  MGVGPEPAKQGYTLLCVAYPRSDLKIETHKEDELYALQ 100

[Close]

BLAST of PI0018802 vs. ExPASy Swiss-Prot
Match: P00247 (Ferredoxin OS=Chlorogloeopsis fritschii OX=1124 PE=1 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 5.2e-19
Identity = 47/96 (48.96%), Postives = 63/96 (65.62%), Query Frame = 0


Query: 42  SYKVVI--EHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS 101
           +YKV +  + EG    +EVD +  IL +A + GL++P+ C+ G C TC  ++ SGTVDQS
Sbjct: 3   TYKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQS 62

Query: 102 -EGMLSDDVVEQGYSLLCVAYPRSDCLIKTIPEEEL 135
            +  L DD +E GY L CVAYP SDC I+T  EEEL
Sbjct: 63  DQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 98

[Close]

BLAST of PI0018802 vs. ExPASy TrEMBL
Match: A0A0A0L4U6 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.2e-71
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHF+PSAFSLPKQKQPIKLS VRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120
           +ESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120

Query: 121 RSDCLIKTIPEEELLALQLATAND 145
           RSDC IKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of PI0018802 vs. ExPASy TrEMBL
Match: A0A5D3D1U0 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHF+PSAFSLPKQKQPIKLS V+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120
           +ESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120

Query: 121 RSDCLIKTIPEEELLALQLATAND 145
           RSDC IKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of PI0018802 vs. ExPASy TrEMBL
Match: A0A1S3AX36 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103483712 PE=3 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHF+PSAFSLPKQKQPIKLS V+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 36  MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 95

Query: 61  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120
           +ESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP
Sbjct: 96  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 155

Query: 121 RSDCLIKTIPEEELLALQLATAND 145
           RSDC IKTIPEEELLALQLATAND
Sbjct: 156 RSDCHIKTIPEEELLALQLATAND 179

[Close]

BLAST of PI0018802 vs. ExPASy TrEMBL
Match: A0A6J1GY17 (Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 5.0e-65
Identity = 129/147 (87.76%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHF+PSAFSLPKQKQP KLS V   RPTTQ+ CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD +ESIL SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCLIKTIPEEELLALQLATAND 145
           AYPRSDC I+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of PI0018802 vs. ExPASy TrEMBL
Match: A0A6J1IWL8 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.9e-64
Identity = 129/147 (87.76%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHF+PSAFSLPKQKQP KLS V   R TTQI CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 11  MATLHFVPSAFSLPKQKQPTKLSSVFKLRQTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 70

Query: 61  VDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD +ESIL+SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 71  VDADESILNSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 130

Query: 121 AYPRSDCLIKTIPEEELLALQLATAND 145
           AYPRSDC I+TIPEEELLALQLATAND
Sbjct: 131 AYPRSDCHIQTIPEEELLALQLATAND 157

[Close]

BLAST of PI0018802 vs. NCBI nr
Match: XP_004134137.1 (ferredoxin C 1, chloroplastic [Cucumis sativus] >KGN56985.1 hypothetical protein Csa_010907 [Cucumis sativus])

HSP 1 Score: 278.9 bits (712), Expect = 2.5e-71
Identity = 139/144 (96.53%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHF+PSAFSLPKQKQPIKLS VRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120
           +ESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVV QGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVAQGYSLLCVAYP 120

Query: 121 RSDCLIKTIPEEELLALQLATAND 145
           RSDC IKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of PI0018802 vs. NCBI nr
Match: XP_008438679.1 (PREDICTED: ferredoxin-1 [Cucumis melo])

HSP 1 Score: 278.1 bits (710), Expect = 4.3e-71
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHF+PSAFSLPKQKQPIKLS V+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 36  MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 95

Query: 61  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120
           +ESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP
Sbjct: 96  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 155

Query: 121 RSDCLIKTIPEEELLALQLATAND 145
           RSDC IKTIPEEELLALQLATAND
Sbjct: 156 RSDCHIKTIPEEELLALQLATAND 179

[Close]

BLAST of PI0018802 vs. NCBI nr
Match: KAA0049364.1 (ferredoxin-1 [Cucumis melo var. makuwa] >TYK17194.1 ferredoxin-1 [Cucumis melo var. makuwa])

HSP 1 Score: 278.1 bits (710), Expect = 4.3e-71
Identity = 138/144 (95.83%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPVRPTTQISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60
           MATLHF+PSAFSLPKQKQPIKLS V+PTT ISCSRRRLVVRSYKVVIEHEGQTTELEVDP
Sbjct: 1   MATLHFVPSAFSLPKQKQPIKLSSVKPTTHISCSRRRLVVRSYKVVIEHEGQTTELEVDP 60

Query: 61  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120
           +ESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP
Sbjct: 61  DESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 120

Query: 121 RSDCLIKTIPEEELLALQLATAND 145
           RSDC IKTIPEEELLALQLATAND
Sbjct: 121 RSDCHIKTIPEEELLALQLATAND 144

[Close]

BLAST of PI0018802 vs. NCBI nr
Match: XP_023526556.1 (uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 6.0e-65
Identity = 130/147 (88.44%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHF+PSAFSLPKQKQP KLS V   RPTTQI CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQIGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD +ESIL SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCLIKTIPEEELLALQLATAND 145
           AYPRSDC I+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of PI0018802 vs. NCBI nr
Match: XP_022956084.1 (uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 256.9 bits (655), Expect = 1.0e-64
Identity = 129/147 (87.76%), Postives = 136/147 (92.52%), Query Frame = 0


Query: 1   MATLHFIPSAFSLPKQKQPIKLSPV---RPTTQISCSRRRLVVRSYKVVIEHEGQTTELE 60
           MATLHF+PSAFSLPKQKQP KLS V   RPTTQ+ CS+RRLVVRSYKVVIEHEGQTTELE
Sbjct: 1   MATLHFVPSAFSLPKQKQPTKLSSVFKLRPTTQLGCSQRRLVVRSYKVVIEHEGQTTELE 60

Query: 61  VDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCV 120
           VD +ESIL SALD GL+IPHDCKLGVCMTCPARLVSG VDQSEGMLSDDVVE+GYSLLCV
Sbjct: 61  VDADESILDSALDKGLDIPHDCKLGVCMTCPARLVSGAVDQSEGMLSDDVVEKGYSLLCV 120

Query: 121 AYPRSDCLIKTIPEEELLALQLATAND 145
           AYPRSDC I+TIPEEELLALQLATAND
Sbjct: 121 AYPRSDCHIQTIPEEELLALQLATAND 147

[Close]

BLAST of PI0018802 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 181.0 bits (458), Expect = 6.7e-46
Identity = 91/144 (63.19%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 9   SAFSLPKQKQPIKLS-PVRPTTQISCSRR-------RLVVRSYKVVIEHEGQTTELEVDP 68
           S  SLPK       S P+R  T  + + R       R++ R+YKVV+EH+G+TTELEV+P
Sbjct: 11  STISLPKPYLSNSFSFPLRNATLSTTTNRRNFLTTGRIIARAYKVVVEHDGKTTELEVEP 70

Query: 69  EESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEGMLSDDVVEQGYSLLCVAYP 128
           +E+ILS ALD+GL++P+DC LGVCMTCPA+LV+GTVDQS GMLSDDVVE+GY+LLC +YP
Sbjct: 71  DETILSKALDSGLDVPYDCNLGVCMTCPAKLVTGTVDQSGGMLSDDVVERGYTLLCASYP 130

Query: 129 RSDCLIKTIPEEELLALQLATAND 145
            SDC IK IPEEELL+LQLATAND
Sbjct: 131 TSDCHIKMIPEEELLSLQLATAND 154

[Close]

BLAST of PI0018802 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 92.8 bits (229), Expect = 2.4e-19
Identity = 45/94 (47.87%), Postives = 64/94 (68.09%), Query Frame = 0


Query: 43  YKV-VIEHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG 102
           YKV ++  +GQ  E EV  ++ IL +A + G+++P+ C+ G C TC  ++VSG VDQS+G
Sbjct: 61  YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120

Query: 103 -MLSDDVVEQGYSLLCVAYPRSDCLIKTIPEEEL 135
             L D  +E+GY L CVAYP+SDC+I T  E EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

[Close]

BLAST of PI0018802 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-15
Identity = 38/91 (41.76%), Postives = 59/91 (64.84%), Query Frame = 0


Query: 46  VIEHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQSEG-MLS 105
           +I  EG+  E+E + +  IL SA + GLE+P+ C+ G C TC  +LVSG VDQS G  L 
Sbjct: 58  LISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGTCGTCCGKLVSGKVDQSLGSFLE 117

Query: 106 DDVVEQGYSLLCVAYPRSDCLIKTIPEEELL 136
           ++ +++GY L C+A P  DC++ T  + +L+
Sbjct: 118 EEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of PI0018802 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 77.8 bits (190), Expect = 7.9e-15
Identity = 51/140 (36.43%), Postives = 81/140 (57.86%), Query Frame = 0


Query: 7   IPSAFSLPKQKQPIKLS--PVRPTTQI-----SCSR--RRLVVRSYKV-VIEHEGQTTEL 66
           I S   L +Q+ PI L   P   T  +     S +R  R   + +YKV  I  EG+  E+
Sbjct: 10  IVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFITPEGE-QEV 69

Query: 67  EVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSGTVDQS-EGMLSDDVVEQGYSLL 126
           E + +  +L +A + GL++P+ C+ G C +C  ++VSG++DQS +  L D+ + +GY L 
Sbjct: 70  ECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLT 129

Query: 127 CVAYPRSDCLIKTIPEEELL 136
           CVAYP SD +I+T  EE ++
Sbjct: 130 CVAYPTSDVVIETHKEEAIM 148

[Close]

BLAST of PI0018802 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14
Identity = 39/102 (38.24%), Postives = 65/102 (63.73%), Query Frame = 0


Query: 36  RRLVVRSYKV-VIEHEGQTTELEVDPEESILSSALDNGLEIPHDCKLGVCMTCPARLVSG 95
           R   + +YKV  I  EG+  E+E D +  +L +A + G+++P+ C+ G C +C  ++VSG
Sbjct: 48  RVTAMATYKVKFITPEGE-LEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSG 107

Query: 96  TVDQS-EGMLSDDVVEQGYSLLCVAYPRSDCLIKTIPEEELL 136
           +VDQS +  L D+ + +G+ L C AYP SD  I+T  EE+++
Sbjct: 108 SVDQSDQSFLDDEQIGEGFVLTCAAYPTSDVTIETHKEEDIV 148

The following BLAST results are available for this feature:

BLAST of PI0018802 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23344	9.4e-45	63.19	Ferredoxin C 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FDC1 PE=1 SV=1	[more]
P00248	1.0e-19	48.96	Ferredoxin OS=Mastigocladus laminosus OX=83541 GN=petF PE=1 SV=2	[more]
P00252	2.3e-19	50.00	Ferredoxin-1 OS=Desmonostoc muscorum OX=1179 PE=1 SV=2	[more]
P08451	4.0e-19	46.94	Ferredoxin-2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) O...	[more]
P00247	5.2e-19	48.96	Ferredoxin OS=Chlorogloeopsis fritschii OX=1124 PE=1 SV=2	[more]

BLAST of PI0018802 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4U6	1.2e-71	96.53	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G146700 PE=3 SV=1	[more]
A0A5D3D1U0	2.1e-71	95.83	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00400 PE=...	[more]
A0A1S3AX36	2.1e-71	95.83	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103483712 PE=3 SV=1	[more]
A0A6J1GY17	5.0e-65	87.76	Ferredoxin OS=Cucurbita moschata OX=3662 GN=LOC111457884 PE=3 SV=1	[more]
A0A6J1IWL8	1.9e-64	87.76	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111479154 PE=3 SV=1	[more]

BLAST of PI0018802 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134137.1	2.5e-71	96.53	ferredoxin C 1, chloroplastic [Cucumis sativus] >KGN56985.1 hypothetical protein...	[more]
XP_008438679.1	4.3e-71	95.83	PREDICTED: ferredoxin-1 [Cucumis melo]	[more]
KAA0049364.1	4.3e-71	95.83	ferredoxin-1 [Cucumis melo var. makuwa] >TYK17194.1 ferredoxin-1 [Cucumis melo v...	[more]
XP_023526556.1	6.0e-65	88.44	uncharacterized protein LOC111790026 [Cucurbita pepo subsp. pepo]	[more]
XP_022956084.1	1.0e-64	87.76	uncharacterized protein LOC111457884 [Cucurbita moschata] >KAG7018707.1 petF2, p...	[more]

BLAST of PI0018802 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14890.1	6.7e-46	63.19	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	2.4e-19	47.87	ferredoxin 3	[more]
AT5G10000.1	1.6e-15	41.76	ferredoxin 4	[more]
AT1G10960.1	7.9e-15	36.43	ferredoxin 1	[more]
AT1G60950.1	1.8e-14	38.24	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 40..142 e-value: 9.2E-27 score: 94.7
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 48..120 e-value: 4.0E-14 score: 52.3
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 43..132 score: 12.144912
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 45..127 e-value: 7.61625E-23 score: 83.9836
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 42..134 e-value: 1.2E-25 score: 87.1
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 1..139
None	No IPR available	PANTHER	PTHR43112:SF9	FERREDOXIN C 1, CHLOROPLASTIC	coord: 1..139
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 41..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018802.1	PI0018802.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding