PI0018759 (gene) Melon (PI 482460) v1

Overview
NamePI0018759
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 28799477 .. 28800008 (-)
RNA-Seq ExpressionPI0018759
SyntenyPI0018759
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACAATACAAAAGATCAAACACTTCTCCCTTCAACAAAACCGGGATCGAACAAATCGAACTGCCAAAAAGAGGGCTTCTACAAACTTCGTTCGCTGAAATTCCCGTTATTCTCGTCCGGCAAAAGTACAATAAATCTCAATGGATTTCAGTCGAAACCACAAAGACGATAAGAATCTCCTCTCAATCTCAATGGAGTTCCGTAGATCGCAGAAGCAACAGTAGAGATTCCCTTAATCGAAAAGATCGTCAAGGAACAGAAAACTCAAAAGGGAGATAAACAAAAACCCTTAAATCCCCCACAGAAGAGCAAGCAAGCAACCACCACGGAAGAGTCTTCAACCCGATCAGAAAACAAAAACCCAACAGAATCAGAAAATCTTATCTTCACAAAATCGACCCAGCAGCGGCGAGAGATTAGATCCTCAAAACAGCACCATTCGTCAAAGCAGCAATCGAGATCCCGGAAACCACCGTCGGGAGATGATAATACCAAAGATCGATACGATTCTTCAACGGCGAATCGATGA

mRNA sequence

ATGAAACAATACAAAAGATCAAACACTTCTCCCTTCAACAAAACCGGGATCGAACAAATCGAACTGCCAAAAAGAGGGCTTCTACAAACTTCGTTCGCTGAAATTCCCGTTATTCTCATCGCAGAAGCAACAGTAGAGATTCCCTTAATCGAAAAGATCGTCAAGGAACAGAAAACTCAAAAGGGAGATAAACAAAAACCCTTAAATCCCCCACAGAAGAGCAAGCAAGCAACCACCACGGAAGAGTCTTCAACCCGATCAGAAAACAAAAACCCAACAGAATCAGAAAATCTTATCTTCACAAAATCGACCCAGCAGCGGCGAGAGATTAGATCCTCAAAACAGCACCATTCGTCAAAGCAGCAATCGAGATCCCGGAAACCACCGTCGGGAGATGATAATACCAAAGATCGATACGATTCTTCAACGGCGAATCGATGA

Coding sequence (CDS)

ATGAAACAATACAAAAGATCAAACACTTCTCCCTTCAACAAAACCGGGATCGAACAAATCGAACTGCCAAAAAGAGGGCTTCTACAAACTTCGTTCGCTGAAATTCCCGTTATTCTCATCGCAGAAGCAACAGTAGAGATTCCCTTAATCGAAAAGATCGTCAAGGAACAGAAAACTCAAAAGGGAGATAAACAAAAACCCTTAAATCCCCCACAGAAGAGCAAGCAAGCAACCACCACGGAAGAGTCTTCAACCCGATCAGAAAACAAAAACCCAACAGAATCAGAAAATCTTATCTTCACAAAATCGACCCAGCAGCGGCGAGAGATTAGATCCTCAAAACAGCACCATTCGTCAAAGCAGCAATCGAGATCCCGGAAACCACCGTCGGGAGATGATAATACCAAAGATCGATACGATTCTTCAACGGCGAATCGATGA

Protein sequence

MKQYKRSNTSPFNKTGIEQIELPKRGLLQTSFAEIPVILIAEATVEIPLIEKIVKEQKTQKGDKQKPLNPPQKSKQATTTEESSTRSENKNPTESENLIFTKSTQQRREIRSSKQHHSSKQQSRSRKPPSGDDNTKDRYDSSTANR
Homology
[Close]
BLAST of PI0018759 vs. ExPASy TrEMBL
Match: A0A0A0L5H0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019920 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 8.3e-60
Identity = 135/146 (92.47%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MKQYKRSNTSPFNKTGIEQIELPKRGLLQTSFAEIPVILIAEATVEIPLIEKIVKEQKTQ 60
           MKQYKRSNTSPFNKTGIEQIELPKRGLLQTSFAEIPVILI EATVEIPLIEK+VKEQ TQ
Sbjct: 1   MKQYKRSNTSPFNKTGIEQIELPKRGLLQTSFAEIPVILIEEATVEIPLIEKLVKEQITQ 60

Query: 61  KGDKQKPLNPPQKSKQATTTEESSTRSENKNPTESENLIFTKSTQQRREIRSSKQHHSSK 120
           KGDKQKPLNPPQKSKQATTTEESSTRS NKN TESENLIF KSTQ+RREIRSSKQHHSSK
Sbjct: 61  KGDKQKPLNPPQKSKQATTTEESSTRSVNKNSTESENLIFKKSTQRRREIRSSKQHHSSK 120

Query: 121 QQSRSRKPPSGDDNTKDRYDSSTANR 147
           QQSRS KPPSGD+NTKDRYDSSTA +
Sbjct: 121 QQSRSGKPPSGDENTKDRYDSSTAKQ 146

[Close]
BLAST of PI0018759 vs. NCBI nr
Match: KGN55852.1 (hypothetical protein Csa_011630 [Cucumis sativus])

HSP 1 Score: 239.6 bits (610), Expect = 1.7e-59
Identity = 135/146 (92.47%), Postives = 139/146 (95.21%), Query Frame = 0 

Query: 1   MKQYKRSNTSPFNKTGIEQIELPKRGLLQTSFAEIPVILIAEATVEIPLIEKIVKEQKTQ 60
           MKQYKRSNTSPFNKTGIEQIELPKRGLLQTSFAEIPVILI EATVEIPLIEK+VKEQ TQ
Sbjct: 1   MKQYKRSNTSPFNKTGIEQIELPKRGLLQTSFAEIPVILIEEATVEIPLIEKLVKEQITQ 60

Query: 61  KGDKQKPLNPPQKSKQATTTEESSTRSENKNPTESENLIFTKSTQQRREIRSSKQHHSSK 120
           KGDKQKPLNPPQKSKQATTTEESSTRS NKN TESENLIF KSTQ+RREIRSSKQHHSSK
Sbjct: 61  KGDKQKPLNPPQKSKQATTTEESSTRSVNKNSTESENLIFKKSTQRRREIRSSKQHHSSK 120

Query: 121 QQSRSRKPPSGDDNTKDRYDSSTANR 147
           QQSRS KPPSGD+NTKDRYDSSTA +
Sbjct: 121 QQSRSGKPPSGDENTKDRYDSSTAKQ 146

The following BLAST results are available for this feature:
BLAST of PI0018759 vs.
Match NameE-valueIdentityDescription
BLAST of PI0018759 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5H08.3e-6092.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019920 PE=4 SV=1[more]
BLAST of PI0018759 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN55852.11.7e-5992.47hypothetical protein Csa_011630 [Cucumis sativus][more]
BLAST of PI0018759 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..146
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018759.1PI0018759.1mRNA