PI0018756 (gene) Melon (PI 482460) v1

Overview
NamePI0018756
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUbiquitin-like protein Nedd8
Locationchr11: 8733952 .. 8736781 (-)
RNA-Seq ExpressionPI0018756
SyntenyPI0018756
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAGTAGTAGTAAAAGCAATTAGCCCAAATTTCTCAAACACTTACAATTCTCCCTTCGTTATCTTTGTTACGAAGAACGTCGGAAGAAAGAAGAAAAAAAAACGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGTCTTTATTTCCTGATTCCCTTCCGTTCTTACCTTTTCAATGAATTCACTACCTTTCTTTGCTTTAATTTCGCTGCTTCTTTGCCCCTTGTTTATGTTTATACCTTTTGATTTATGTTTACTTTCATTTCTTTGAGATTCCTTCGCCCTTCGGATGTTATTGCCTTTTGCCGCTTCGATTTCAGTTGTTTTTGTTCGTAATTCTGTCTAGCATGCGATTGCTTTGGATTCTGTATCATTGCATGATCCAATGGATGAAGAATTAAGAAATTGGCGTTAATGATTTCATCTCCGTTTAGCACACGTGTTAAGTTGAACTGTCGGAATAGGTTTTCTTTTTAAATTATTTTTAATATGTTTGCGGTCTCTAAGTTTATGCTTGTTCTTATCGTCTGGTTGTTTGTTAGTTCATCATATTTTAAGCTTCTTCCATGGCTTGATTTTGTTTTCAGGTGTATGTTTATATTCTCGTCACATCACTTTATGAACAAAATTATTTTTGATGCATGAATTGGTCTGGGAATTTGATTCCAGCGTGCCGTTTTTTAATCATATTTTGAATGTTGGAATCTATATTTCGTCTAGCTTTAAACAGGGGAGATTAGGCAATTTGGTTTTAATGGTCTGTTTTAATGCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACGCTGACCGGGAAGGAAATTGAGATTGACATCGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGTTTGCATTTGCCTTCTTCTTTAATTACTTAAACTACAATAACTATATTTTCTATGGCCTTTTGTATATGTGGATAACTTGTTTAATCCCTCAAATACGTCACTGTGCCTTCTCTGTTTAAGAATGGAATTTGGTGTGGAAATTTCTTACTTAGCACAGGGTTCATTAGTACTTTTTGGTAAGGAAACAATGAAGTTGGGTGGATTTTAGTTTCCAAAACTGATTTCATACTTGAGTTTTATTTTAAAATGTCCTTACATAACGCTACTCAAACAATTTAAGTACAGTTCTATTGCTAATTTGAGAGGGTTTAGTGGAATGGACATCTATTCCACTTTTCTAAGGTTGAAGAATCCATCTCTTATAAAATAGAAGACCGGACATGCCTATTAAGTCTTTTTTATGTTTGTTGTATTTTTACATGTTTGAGGTACTTGAAGTTTTATTCTGAACAGTAAAATGTTTGTAATACATTTATAATTAAATATGAAGGAAGATTCAAGATTTACAATACTCAGCTAGGTAATGTTTTATAGTGAAGGTTTATAAAAGATACCTAAATGCAATGAGTATATTTTCTAGTTGTTGCAAAATAACTAAGAATAGGAATTCAAAACAAAATTTCATGTAAAATAGTATTGAAGCTGTTGATTCAGAATTCTGATATAGACTGACAGACTTTTGTTAGTTTCACATACTTAGAAAATTAACTCCATGGTTCAAGTTCAAGTATCTGAATTTAAATTGTAAATAAATGATTTCCAATGGTCCAATACGGTAATGCTTTCCTGACAATCGATAGTTTGATAGACTTAGACAGTCACGTTACTTAAGTTTAAGTGTCTATGATTTGTAGGCTTTCTCTAGTTGGCTTCCAATGGTCTTTCCTCTAATATCCATTGTGTTATTATTTTCTGGAGTGGCGTTAAATATATCTTACTCTCGTAATGACAATTAGTGAGTCAACAATTTTGAATTTCATCAAAATCGTTGTTCTAGTTCCTGTGGTCGGCCATCTATGAACTCATACCGGGTGAATGCTATCTGTCATTGCTTTTAGTTTTATGACACTTAAAATTTGATATTGCACTGTGCTTATTATAACAAGTTCTATTGTACTCTGCCTTTTGCAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAATATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTTTCTGTAAAAGCATTTATCTATCACCTCCTGAAATTCAGAATTTTTAGTTTTTTATTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTTGCTTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTTAACTCTCTTATCAAATTACTCTTGTAATAGAGAGATTTCATGTCCTGTGTATCTCCATCTCTTTTCAAGTTCAACATTAAACCATTTGGTGTGCGTGGAAGGAGGAGTTTGTAAAATTTCGTCCCAAAGTCTATCAATTTTTATTGGGGGAATGGAAGCTTAATTATCTCTCTCTATTGTTTTACTTTATTTTCATAGATCCTCTCCTGTTTATGACCAGGGCTTGTATCTCATTGGCACAAAGTGTTTGGATGTCCTTCACCAGGTGCGTTTCATACTCTTTCTTTCCGCTTATTATAATAGTGTGGCGCATGTGGATTGTTTGCTAATGTTTTTGTTTTCCCTTTTCAATTTTTTGAGAAAT

mRNA sequence

GGAGAGTAGTAGTAAAAGCAATTAGCCCAAATTTCTCAAACACTTACAATTCTCCCTTCGTTATCTTTGTTACGAAGAACGTCGGAAGAAAGAAGAAAAAAAAACGATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACGCTGACCGGGAAGGAAATTGAGATTGACATCGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAATATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTTTCTGTAAAAGCATTTATCTATCACCTCCTGAAATTCAGAATTTTTAGTTTTTTATTTTGTTGGTGCTTGATGAATGCATGAGCGGCATCTTTGCTTGTGTGGATAAATGGAAAATATTTGAGCCCAAACTTTAACTCTCTTATCAAATTACTCTTGTAATAGAGAGATTTCATGTCCTGTGTATCTCCATCTCTTTTCAAGTTCAACATTAAACCATTTGGTGTGCGTGGAAGGAGGAGTTTGTAAAATTTCGTCCCAAAGTCTATCAATTTTTATTGGGGGAATGGAAGCTTAATTATCTCTCTCTATTGTTTTACTTTATTTTCATAGATCCTCTCCTGTTTATGACCAGGGCTTGTATCTCATTGGCACAAAGTGTTTGGATGTCCTTCACCAGGTGCGTTTCATACTCTTTCTTTCCGCTTATTATAATAGTGTGGCGCATGTGGATTGTTTGCTAATGTTTTTGTTTTCCCTTTTCAATTTTTTGAGAAAT

Coding sequence (CDS)

ATGCAGATCTTTGTCAAAACCCTAACTGGGAAGACGATCACGCTCGAAGTCGAGAGCAGTGATACCATCGATAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAGAGATTAATTTTTGCTGGTAAACAATTAGAAGATGGTCGAACGCTTGCAGATTATAACATTCAAAAGGAGTCAACCCTTCACTTGGTTTTGAGGCTTAGGGGAGGTACTATGATTAAGGTCAAGACGCTGACCGGGAAGGAAATTGAGATTGACATCGAGCCAACTGACACAATTGATCGTATTAAGGAGCGGGTTGAGGAGAAAGAGGGGATTCCCCCTGTACAGCAAAGGCTCATTTATGCCGGTAAACAGCTTGGAGATGACAAAACGGCTAAAGACTACAATATCGAGGGTGGTTCTGTTCTCCATCTAGTGCTAGCCCTGAGGGGTGGTTTTCTGTAA

Protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL
Homology
[Close]
BLAST of PI0018756 vs. ExPASy Swiss-Prot
Match: Q9SHE7 (Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 SV=3)

HSP 1 Score: 296.2 bits (757), Expect = 2.1e-79
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGF 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGF
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

[Close]
BLAST of PI0018756 vs. ExPASy Swiss-Prot
Match: P0C030 (Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 295.0 bits (754), Expect = 4.8e-79
Identity = 151/153 (98.69%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGF 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of PI0018756 vs. ExPASy Swiss-Prot
Match: P0C073 (Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 6.2e-79
Identity = 150/153 (98.04%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDR+KERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGF 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG+
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGY 153

[Close]
BLAST of PI0018756 vs. ExPASy Swiss-Prot
Match: P0C031 (Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RUB2 PE=2 SV=2)

HSP 1 Score: 293.9 bits (751), Expect = 1.1e-78
Identity = 151/152 (99.34%), Postives = 151/152 (99.34%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG 153
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGG
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 152

[Close]
BLAST of PI0018756 vs. ExPASy Swiss-Prot
Match: Q8RUC6 (Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 SV=3)

HSP 1 Score: 292.4 bits (747), Expect = 3.1e-78
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of PI0018756 vs. ExPASy TrEMBL
Match: A0A6J1D6N8 (ubiquitin-NEDD8-like protein RUB1 OS=Momordica charantia OX=3673 GN=LOC111018120 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.7e-77
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of PI0018756 vs. ExPASy TrEMBL
Match: A0A5D3CE17 (Ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00180 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.5e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of PI0018756 vs. ExPASy TrEMBL
Match: A0A1S3C469 (ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 3.5e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of PI0018756 vs. ExPASy TrEMBL
Match: A0A498I4U3 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019369 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGSL 154

[Close]
BLAST of PI0018756 vs. ExPASy TrEMBL
Match: A0A6A1W291 (Ubiquitin-NEDD8-like protein RUB2 OS=Morella rubra OX=262757 GN=CJ030_MR4G016067 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.6e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGSL 154

[Close]
BLAST of PI0018756 vs. NCBI nr
Match: XP_004139900.1 (ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus] >XP_038900398.1 ubiquitin-NEDD8-like protein RUB1 [Benincasa hispida] >KAE8646873.1 hypothetical protein Csa_020638 [Cucumis sativus])

HSP 1 Score: 298.9 bits (764), Expect = 2.5e-77
Identity = 153/154 (99.35%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of PI0018756 vs. NCBI nr
Match: XP_022149770.1 (ubiquitin-NEDD8-like protein RUB1 [Momordica charantia])

HSP 1 Score: 297.7 bits (761), Expect = 5.6e-77
Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQL+DGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLDDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG+L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGYL 154

[Close]
BLAST of PI0018756 vs. NCBI nr
Match: XP_008456305.1 (PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo] >KAA0054675.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa] >TYK08596.1 ubiquitin-NEDD8-like protein RUB1 [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 7.3e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGHL 154

[Close]
BLAST of PI0018756 vs. NCBI nr
Match: XP_028067984.1 (ubiquitin-NEDD8-like protein RUB2 [Camellia sinensis] >XP_028947901.1 ubiquitin-NEDD8-like protein RUB2 isoform X1 [Malus domestica] >KAB1216920.1 Ubiquitin-NEDD8-like protein RUB2 [Morella rubra] >KAB2608029.1 polyubiquitin [Pyrus ussuriensis x Pyrus communis] >RXH76481.1 hypothetical protein DVH24_019369 [Malus domestica])

HSP 1 Score: 297.0 bits (759), Expect = 9.6e-77
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGSL 154

[Close]
BLAST of PI0018756 vs. NCBI nr
Match: KAF7139896.1 (hypothetical protein RHSIM_Rhsim06G0241500 [Rhododendron simsii])

HSP 1 Score: 296.6 bits (758), Expect = 1.2e-76
Identity = 153/154 (99.35%), Postives = 153/154 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGGL 154

[Close]
BLAST of PI0018756 vs. TAIR 10
Match: AT1G31340.1 (related to ubiquitin 1 )

HSP 1 Score: 296.2 bits (757), Expect = 1.5e-80
Identity = 152/153 (99.35%), Postives = 152/153 (99.35%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGF 154
           YAGKQL DDKTAKDYNIEGGSVLHLVLALRGGF
Sbjct: 121 YAGKQLADDKTAKDYNIEGGSVLHLVLALRGGF 153

[Close]
BLAST of PI0018756 vs. TAIR 10
Match: AT2G35635.1 (ubiquitin 7 )

HSP 1 Score: 292.4 bits (747), Expect = 2.2e-79
Identity = 151/154 (98.05%), Postives = 151/154 (98.05%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI
Sbjct: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGFL 155
           YAGKQL DDKTAKDY IEGGSVLHLVLALRGG L
Sbjct: 121 YAGKQLADDKTAKDYAIEGGSVLHLVLALRGGLL 154

[Close]
BLAST of PI0018756 vs. TAIR 10
Match: AT4G05320.2 (polyubiquitin 10 )

HSP 1 Score: 244.6 bits (623), Expect = 5.3e-65
Identity = 124/153 (81.05%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 365 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 424

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGF 154
           +AGKQL D +T  DYNI+  S LHLVL LRGGF
Sbjct: 425 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 457

[Close]
BLAST of PI0018756 vs. TAIR 10
Match: AT4G02890.1 (Ubiquitin family protein )

HSP 1 Score: 244.6 bits (623), Expect = 5.3e-65
Identity = 124/153 (81.05%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGF 154
           +AGKQL D +T  DYNI+  S LHLVL LRGGF
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

[Close]
BLAST of PI0018756 vs. TAIR 10
Match: AT4G05050.1 (ubiquitin 11 )

HSP 1 Score: 244.6 bits (623), Expect = 5.3e-65
Identity = 124/153 (81.05%), Postives = 136/153 (88.89%), Query Frame = 0 

Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 77  MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136

Query: 61  IQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLI 120
           IQKESTLHLVLRLRGG  I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI
Sbjct: 137 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI 196

Query: 121 YAGKQLGDDKTAKDYNIEGGSVLHLVLALRGGF 154
           +AGKQL D +T  DYNI+  S LHLVL LRGGF
Sbjct: 197 FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGF 229

The following BLAST results are available for this feature:
BLAST of PI0018756 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SHE72.1e-7999.35Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana OX=3702 GN=RUB1 PE=1 S... [more]
P0C0304.8e-7998.69Ubiquitin-NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
P0C0736.2e-7998.04Ubiquitin-NEDD8-like protein RUB1 OS=Deschampsia antarctica OX=159298 GN=RUB1 PE... [more]
P0C0311.1e-7899.34Ubiquitin-NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica OX=39947 GN=RU... [more]
Q8RUC63.1e-7898.05Ubiquitin-NEDD8-like protein RUB2 OS=Arabidopsis thaliana OX=3702 GN=RUB2 PE=1 S... [more]
BLAST of PI0018756 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D6N82.7e-7798.70ubiquitin-NEDD8-like protein RUB1 OS=Momordica charantia OX=3673 GN=LOC111018120... [more]
A0A5D3CE173.5e-7799.35Ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A1S3C4693.5e-7799.35ubiquitin-NEDD8-like protein RUB1 OS=Cucumis melo OX=3656 GN=LOC103496293 PE=4 S... [more]
A0A498I4U34.6e-7799.35Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_019369 PE=4 SV=1[more]
A0A6A1W2914.6e-7799.35Ubiquitin-NEDD8-like protein RUB2 OS=Morella rubra OX=262757 GN=CJ030_MR4G016067... [more]
BLAST of PI0018756 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004139900.12.5e-7799.35ubiquitin-NEDD8-like protein RUB1 [Cucumis sativus] >XP_038900398.1 ubiquitin-NE... [more]
XP_022149770.15.6e-7798.70ubiquitin-NEDD8-like protein RUB1 [Momordica charantia][more]
XP_008456305.17.3e-7799.35PREDICTED: ubiquitin-NEDD8-like protein RUB1 [Cucumis melo] >KAA0054675.1 ubiqui... [more]
XP_028067984.19.6e-7799.35ubiquitin-NEDD8-like protein RUB2 [Camellia sinensis] >XP_028947901.1 ubiquitin-... [more]
KAF7139896.11.2e-7699.35hypothetical protein RHSIM_Rhsim06G0241500 [Rhododendron simsii][more]
BLAST of PI0018756 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G31340.11.5e-8099.35related to ubiquitin 1 [more]
AT2G35635.12.2e-7998.05ubiquitin 7 [more]
AT4G05320.25.3e-6581.05polyubiquitin 10 [more]
AT4G02890.15.3e-6581.05Ubiquitin family protein [more]
AT4G05050.15.3e-6581.05ubiquitin 11 [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019956Ubiquitin domainPRINTSPR00348UBIQUITINcoord: 53..74
score: 91.18
coord: 11..31
score: 85.2
coord: 32..52
score: 95.05
IPR000626Ubiquitin-like domainSMARTSM00213ubq_7coord: 1..72
e-value: 3.0E-35
score: 133.1
coord: 77..148
e-value: 1.2E-27
score: 107.9
IPR000626Ubiquitin-like domainPFAMPF00240ubiquitincoord: 3..74
e-value: 5.8E-34
score: 115.7
coord: 79..150
e-value: 6.4E-28
score: 96.3
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 77..152
score: 26.423656
IPR000626Ubiquitin-like domainPROSITEPS50053UBIQUITIN_2coord: 1..76
score: 30.452106
NoneNo IPR availableGENE3D3.10.20.90coord: 78..153
e-value: 4.0E-34
score: 118.6
coord: 1..77
e-value: 8.3E-47
score: 159.4
NoneNo IPR availablePANTHERPTHR10666:SF364SUBFAMILY NOT NAMEDcoord: 1..152
NoneNo IPR availablePANTHERPTHR10666UBIQUITINcoord: 1..152
NoneNo IPR availableCDDcd01803Ubl_ubiquitincoord: 1..76
e-value: 2.93964E-51
score: 156.065
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 103..128
IPR019954Ubiquitin conserved sitePROSITEPS00299UBIQUITIN_1coord: 27..52
IPR038738Nedd8-like ubiquitinCDDcd01806Ubl_NEDD8coord: 79..152
e-value: 1.13676E-47
score: 147.15
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 78..152
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 1..76

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018756.1PI0018756.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0019941 modification-dependent protein catabolic process
biological_process GO:0045116 protein neddylation
biological_process GO:0016567 protein ubiquitination
biological_process GO:0009733 response to auxin
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003729 mRNA binding
molecular_function GO:0031386 protein tag
molecular_function GO:0031625 ubiquitin protein ligase binding
molecular_function GO:0005515 protein binding