PI0018670 (gene) Melon (PI 482460) v1

Overview
NamePI0018670
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr05: 12528658 .. 12528987 (-)
RNA-Seq ExpressionPI0018670
SyntenyPI0018670
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGACAATAGAGGTGCTCCACAGAGGCAGCTACAAGAAGGACTCAATGAAGAAGTTATGCAACGCTTGGAGACTTTAATTAATGTGAGGTTAGACAAACTAGAACAAAGGTTTCAAACTAGGAAAATACTTGAAGTAAGGAGACCGGTTGTGAGGGTTCCTGAGGAGGAAAAAGATTCAGAGCAAAATGAATCTGACACTGACCTTGTTATAGATGGGTCTAGGAGAGGGAATCGACATGGCCCGAGAGGAAGGAGAGGTTTTCACAACAGAAGACTCCAGGTAGAAGAGAAAACAACCATGGAGATCGAGGTTTTGGAAACCTGA

mRNA sequence

ATGGCGGACAATAGAGGTGCTCCACAGAGGCAGCTACAAGAAGGACTCAATGAAGAAGTTATGCAACGCTTGGAGACTTTAATTAATGTGAGGTTAGACAAACTAGAACAAAGGTTTCAAACTAGGAAAATACTTGAAGTAAGGAGACCGGTTGTGAGGGTTCCTGAGGAGGAAAAAGATTCAGAGCAAAATGAATCTGACACTGACCTTGTTATAGATGGGTCTAGGAGAGGGAATCGACATGGCCCGAGAGGAAGGAGAGGTTTTCACAACAGAAGACTCCAGGTAGAAGAGAAAACAACCATGGAGATCGAGGTTTTGGAAACCTGA

Coding sequence (CDS)

ATGGCGGACAATAGAGGTGCTCCACAGAGGCAGCTACAAGAAGGACTCAATGAAGAAGTTATGCAACGCTTGGAGACTTTAATTAATGTGAGGTTAGACAAACTAGAACAAAGGTTTCAAACTAGGAAAATACTTGAAGTAAGGAGACCGGTTGTGAGGGTTCCTGAGGAGGAAAAAGATTCAGAGCAAAATGAATCTGACACTGACCTTGTTATAGATGGGTCTAGGAGAGGGAATCGACATGGCCCGAGAGGAAGGAGAGGTTTTCACAACAGAAGACTCCAGGTAGAAGAGAAAACAACCATGGAGATCGAGGTTTTGGAAACCTGA

Protein sequence

MADNRGAPQRQLQEGLNEEVMQRLETLINVRLDKLEQRFQTRKILEVRRPVVRVPEEEKDSEQNESDTDLVIDGSRRGNRHGPRGRRGFHNRRLQVEEKTTMEIEVLET
Homology
BLAST of PI0018670 vs. ExPASy TrEMBL
Match: A0A5D3BY01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00400 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-13
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0

Query: 13 QEGLNEEVMQRLETLINVRLDKLEQRFQTRKILEVRRPVVRVPEEEKDSEQNESDTDLVI 72
          +E +N+E+MQ LE + N R+D+LEQR Q ++  EVRR VVR P++E++S QN S+ D +I
Sbjct: 17 RESINKEIMQCLEIINNARIDRLEQRLQAKERPEVRRRVVREPKQEEESNQNRSNFDRII 76

Query: 73 DGSRRGNRHGPRGRRGFHNRRLQ 96
          D  RRG +HG RG  GF NRRLQ
Sbjct: 77 DEPRRGEQHGSRGTGGFQNRRLQ 99

BLAST of PI0018670 vs. ExPASy TrEMBL
Match: A0A5A7TC25 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold322G00440 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.5e-10
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 1  MADNRGAPQRQLQEGLNEEVMQRLETLINVRLDKLEQRFQTRKILEVRRPVVRVPEEEKD 60
          MA N G PQ  LQ G +E+VMQRLETLINV+LD LEQRFQ ++  EVRR VV   + E+D
Sbjct: 1  MAGNGGTPQGPLQ-GHSEKVMQRLETLINVKLDILEQRFQAKERPEVRRQVVGNLDVEED 60

Query: 61 SEQNESDTDLVIDGSR 77
          SEQNES+++  IDG R
Sbjct: 61 SEQNESNSNPSIDGPR 75

BLAST of PI0018670 vs. NCBI nr
Match: TYK04367.1 (hypothetical protein E5676_scaffold675G00400 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 4.0e-13
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0

Query: 13 QEGLNEEVMQRLETLINVRLDKLEQRFQTRKILEVRRPVVRVPEEEKDSEQNESDTDLVI 72
          +E +N+E+MQ LE + N R+D+LEQR Q ++  EVRR VVR P++E++S QN S+ D +I
Sbjct: 17 RESINKEIMQCLEIINNARIDRLEQRLQAKERPEVRRRVVREPKQEEESNQNRSNFDRII 76

Query: 73 DGSRRGNRHGPRGRRGFHNRRLQ 96
          D  RRG +HG RG  GF NRRLQ
Sbjct: 77 DEPRRGEQHGSRGTGGFQNRRLQ 99

BLAST of PI0018670 vs. NCBI nr
Match: KAA0039137.1 (hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK26975.1 hypothetical protein E5676_scaffold322G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 7.1e-10
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 0

Query: 1  MADNRGAPQRQLQEGLNEEVMQRLETLINVRLDKLEQRFQTRKILEVRRPVVRVPEEEKD 60
          MA N G PQ  LQ G +E+VMQRLETLINV+LD LEQRFQ ++  EVRR VV   + E+D
Sbjct: 1  MAGNGGTPQGPLQ-GHSEKVMQRLETLINVKLDILEQRFQAKERPEVRRQVVGNLDVEED 60

Query: 61 SEQNESDTDLVIDGSR 77
          SEQNES+++  IDG R
Sbjct: 61 SEQNESNSNPSIDGPR 75

BLAST of PI0018670 vs. NCBI nr
Match: KAE8648047.1 (hypothetical protein Csa_023604, partial [Cucumis sativus])

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-04
Identity = 32/54 (59.26%), Postives = 40/54 (74.07%), Query Frame = 0

Query: 25 ETLINVRLDKLEQRFQTRKILEVRRPVVRVPEEEKDSEQNESDTDLVIDGSRRG 79
          ETLI+ RLD LEQRFQ ++  E RR VV   +EE+D +QNE D+D +IDG RRG
Sbjct: 1  ETLISGRLDILEQRFQAKERSEARRRVVEDSKEEEDLKQNEFDSDPIIDGPRRG 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BY012.0e-1354.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TC253.5e-1061.84Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
TYK04367.14.0e-1354.22hypothetical protein E5676_scaffold675G00400 [Cucumis melo var. makuwa][more]
KAA0039137.17.1e-1061.84hypothetical protein E6C27_scaffold121G00300 [Cucumis melo var. makuwa] >TYK2697... [more]
KAE8648047.11.5e-0459.26hypothetical protein Csa_023604, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018670.1PI0018670.1mRNA