PI0018669 (gene) Melon (PI 482460) v1

Overview


Name	PI0018669
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein IDA-like
Location	chr09: 4620644 .. 4621124 (+)
RNA-Seq Expression	PI0018669
Synteny	PI0018669

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAATCCCCAATTTTCTCTCATCACATGGCCTCCTCCATTTTCTTCATCTTCCTCCTCATTCTTCCCCTTCCTAATTTCACCACCGCACGCCCATTTCCGGCAACCTCAATGGCGGAGCCATCGTCTCACAATACCCACCTCACCACCGCTTTCCGCTTCAACCATCAAATCTTCAGCTTCCTTCCCAAAGGTCCCATTCCGCCTTCCGCTCCTTCAAAAAGACACAACTCGCTCGTCAACTCAGCTCCACTCAACTGAGTTCTCTCTCTCTCAACTCGTCCTTAATTTTGGAGCATTTTTCCCCCCAAGGCCTGTCATCTAATCTAAGATCCTAATTGCAATTTACAGGCTCTTTTTTTTTTTTTTTCTCTTTTTTGAAAAAAAAAATATTTATATATTTATATGTAGAATTATAGATATAGTGTGTGTATACAAAATTCCATTTGTTTATATGTGAAAGAGGTTCTTAATTTTCTTT

mRNA sequence

CAAAAATCCCCAATTTTCTCTCATCACATGGCCTCCTCCATTTTCTTCATCTTCCTCCTCATTCTTCCCCTTCCTAATTTCACCACCGCACGCCCATTTCCGGCAACCTCAATGGCGGAGCCATCGTCTCACAATACCCACCTCACCACCGCTTTCCGCTTCAACCATCAAATCTTCAGCTTCCTTCCCAAAGGTCCCATTCCGCCTTCCGCTCCTTCAAAAAGACACAACTCGCTCGTCAACTCAGCTCCACTCAACTGAGTTCTCTCTCTCTCAACTCGTCCTTAATTTTGGAGCATTTTTCCCCCCAAGGCCTGTCATCTAATCTAAGATCCTAATTGCAATTTACAGGCTCTTTTTTTTTTTTTTTCTCTTTTTTGAAAAAAAAAATATTTATATATTTATATGTAGAATTATAGATATAGTGTGTGTATACAAAATTCCATTTGTTTATATGTGAAAGAGGTTCTTAATTTTCTTT

Coding sequence (CDS)

ATGGCCTCCTCCATTTTCTTCATCTTCCTCCTCATTCTTCCCCTTCCTAATTTCACCACCGCACGCCCATTTCCGGCAACCTCAATGGCGGAGCCATCGTCTCACAATACCCACCTCACCACCGCTTTCCGCTTCAACCATCAAATCTTCAGCTTCCTTCCCAAAGGTCCCATTCCGCCTTCCGCTCCTTCAAAAAGACACAACTCGCTCGTCAACTCAGCTCCACTCAACTGA

Protein sequence

MASSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKGPIPPSAPSKRHNSLVNSAPLN

Homology

[Close]

BLAST of PI0018669 vs. ExPASy Swiss-Prot
Match: Q8LAD7 (Protein IDA OS=Arabidopsis thaliana OX=3702 GN=IDA PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 46 NHQIFSFLPKG-PIPPSAPSKRHNSLVNSAP 76
          N  IF +LPKG PIPPSAPSKRHNS VNS P
Sbjct: 46 NSHIFGYLPKGVPIPPSAPSKRHNSFVNSLP 76

[Close]

BLAST of PI0018669 vs. ExPASy TrEMBL
Match: A0A0A0KPP8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577390 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.7e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 2  ASSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKGPIPPS 61
          +SSIFFI LLILPLPNFTTARPFPAT+M EPSSHNTHLTTAFRFNHQIFSFLPKGPIPPS
Sbjct: 3  SSSIFFILLLILPLPNFTTARPFPATTMTEPSSHNTHLTTAFRFNHQIFSFLPKGPIPPS 62

Query: 62 APSKRHNSLVNSAPLN 78
          APSKRHNSL+NSAPLN
Sbjct: 63 APSKRHNSLINSAPLN 78

[Close]

BLAST of PI0018669 vs. ExPASy TrEMBL
Match: A0A5D3CCP4 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00620 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-06
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 3   SSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKG-PIPPS 62
           +SI    LL+L L  F++A     T      S++ + TTAFR+  Q F FLPKG PIPPS
Sbjct: 27  NSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFGFLPKGVPIPPS 86

Query: 63  APSKRHNSLVNSAPLN 78
            PS RHNS+V+S P N
Sbjct: 87  GPSDRHNSVVDSLPPN 102

[Close]

BLAST of PI0018669 vs. ExPASy TrEMBL
Match: A0A5A7SV51 (Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G005330 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.8e-06
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 3  SSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKG-PIPPS 62
          +SI    LL+L L  F++A     T      S++ + TTAFR+  Q F FLPKG PIPPS
Sbjct: 23 NSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFGFLPKGVPIPPS 82

Query: 63 APSKRHNSLVNSAPLN 78
           PS RHNS+V+S P N
Sbjct: 83 GPSDRHNSVVDSLPPN 98

[Close]

BLAST of PI0018669 vs. ExPASy TrEMBL
Match: A0A2P6R1Y4 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0436131 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.8e-06
Identity = 28/38 (73.68%), Postives = 31/38 (81.58%), Query Frame = 0


Query: 41  TAFRFNHQIFSFLPKG-PIPPSAPSKRHNSLVNSAPLN 78
           TAFRF  +IFSF PKG P+PPS PSKRHNS+VNS P N
Sbjct: 64  TAFRFRGEIFSFFPKGSPVPPSGPSKRHNSVVNSTPKN 101

[Close]

BLAST of PI0018669 vs. ExPASy TrEMBL
Match: A0A0A0KR07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608230 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05
Identity = 39/77 (50.65%), Postives = 48/77 (62.34%), Query Frame = 0


Query: 5  IFFIFLLILPLPNFTTA-RPFPATSMAE--PSSHNTHLTTAFRFNHQIFSFLPKG-PIPP 64
          IF + LL+L L   ++A RP       E  P   N++  TAFR+  Q FSFLPKG PIPP
Sbjct: 12 IFILLLLLLLLSGLSSATRPGKTMEFTEMNPDMSNSY-KTAFRYGGQTFSFLPKGVPIPP 71

Query: 65 SAPSKRHNSLVNSAPLN 78
          S PS RHNS+V+S P N
Sbjct: 72 SGPSDRHNSVVDSLPPN 87

[Close]

BLAST of PI0018669 vs. NCBI nr
Match: KGN51548.1 (hypothetical protein Csa_008377 [Cucumis sativus])

HSP 1 Score: 147.9 bits (372), Expect = 3.6e-32
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 0


Query: 2  ASSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKGPIPPS 61
          +SSIFFI LLILPLPNFTTARPFPAT+M EPSSHNTHLTTAFRFNHQIFSFLPKGPIPPS
Sbjct: 3  SSSIFFILLLILPLPNFTTARPFPATTMTEPSSHNTHLTTAFRFNHQIFSFLPKGPIPPS 62

Query: 62 APSKRHNSLVNSAPLN 78
          APSKRHNSL+NSAPLN
Sbjct: 63 APSKRHNSLINSAPLN 78

[Close]

BLAST of PI0018669 vs. NCBI nr
Match: KAG6579701.1 (hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 72.0 bits (175), Expect = 2.5e-09
Identity = 43/71 (60.56%), Postives = 52/71 (73.24%), Query Frame = 0


Query: 3   SSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKG-PIPPS 62
           +S+ F FLL L L  F++ARP PAT     +S      TAFRF+HQ+FSFLPKG PIPPS
Sbjct: 54  ASLLFFFLLTL-LLGFSSARPAPATMAG--TSFFPAPNTAFRFHHQVFSFLPKGTPIPPS 113

Query: 63  APSKRHNSLVN 73
           APSKRHNS+V+
Sbjct: 114 APSKRHNSVVD 121

[Close]

BLAST of PI0018669 vs. NCBI nr
Match: KAG6601760.1 (hypothetical protein SDJN03_06993, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 67.4 bits (163), Expect = 6.2e-08
Identity = 44/75 (58.67%), Postives = 53/75 (70.67%), Query Frame = 0


Query: 3  SSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLT--TAFRFNHQIFSFLPKG-PIP 62
          +SI F+ LLIL LP FT+ARP PAT      +HN   T   A +F  Q FSFLP+G PIP
Sbjct: 8  TSISFLLLLIL-LPPFTSARPPPATM----PTHNFLPTPNAAIQFQRQFFSFLPRGVPIP 67

Query: 63 PSAPSKRHNSLVNSA 75
          PSAPSKRHNS+++SA
Sbjct: 68 PSAPSKRHNSVLHSA 77

[Close]

BLAST of PI0018669 vs. NCBI nr
Match: KAA0034518.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 5.8e-06
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 3  SSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKG-PIPPS 62
          +SI    LL+L L  F++A     T      S++ + TTAFR+  Q F FLPKG PIPPS
Sbjct: 23 NSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFGFLPKGVPIPPS 82

Query: 63 APSKRHNSLVNSAPLN 78
           PS RHNS+V+S P N
Sbjct: 83 GPSDRHNSVVDSLPPN 98

[Close]

BLAST of PI0018669 vs. NCBI nr
Match: TYK09072.1 (putative Membrane lipoprotein [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 5.8e-06
Identity = 37/76 (48.68%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 3   SSIFFIFLLILPLPNFTTARPFPATSMAEPSSHNTHLTTAFRFNHQIFSFLPKG-PIPPS 62
           +SI    LL+L L  F++A     T      S++ + TTAFR+  Q F FLPKG PIPPS
Sbjct: 27  NSIPIFILLLLLLSGFSSATRPGGTMEFPDMSNSNYKTTAFRYAGQTFGFLPKGVPIPPS 86

Query: 63  APSKRHNSLVNSAPLN 78
            PS RHNS+V+S P N
Sbjct: 87  GPSDRHNSVVDSLPPN 102

[Close]

BLAST of PI0018669 vs. TAIR 10
Match: AT1G68765.1 (Putative membrane lipoprotein )

HSP 1 Score: 50.4 bits (119), Expect = 7.3e-07
Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0


Query: 46 NHQIFSFLPKG-PIPPSAPSKRHNSLVNSAP 76
          N  IF +LPKG PIPPSAPSKRHNS VNS P
Sbjct: 46 NSHIFGYLPKGVPIPPSAPSKRHNSFVNSLP 76

The following BLAST results are available for this feature:

BLAST of PI0018669 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LAD7	1.0e-05	77.42	Protein IDA OS=Arabidopsis thaliana OX=3702 GN=IDA PE=1 SV=1	[more]

BLAST of PI0018669 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPP8	1.7e-32	93.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G577390 PE=4 SV=1	[more]
A0A5D3CCP4	2.8e-06	48.68	Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7SV51	2.8e-06	48.68	Putative Membrane lipoprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A2P6R1Y4	4.8e-06	73.68	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0436131 PE=4...	[more]
A0A0A0KR07	1.1e-05	50.65	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G608230 PE=4 SV=1	[more]

BLAST of PI0018669 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN51548.1	3.6e-32	93.42	hypothetical protein Csa_008377 [Cucumis sativus]	[more]
KAG6579701.1	2.5e-09	60.56	hypothetical protein SDJN03_24149, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6601760.1	6.2e-08	58.67	hypothetical protein SDJN03_06993, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAA0034518.1	5.8e-06	48.68	putative Membrane lipoprotein [Cucumis melo var. makuwa]	[more]
TYK09072.1	5.8e-06	48.68	putative Membrane lipoprotein [Cucumis melo var. makuwa]	[more]

BLAST of PI0018669 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68765.1	7.3e-07	77.42	Putative membrane lipoprotein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..77
None	No IPR available	PANTHER	PTHR33599:SF18	PROTEIN IDA	coord: 28..77
IPR039639	Protein IDA-like	PANTHER	PTHR33599	PROTEIN IDA-LIKE 5	coord: 28..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018669.1	PI0018669.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010227	floral organ abscission
cellular_component	GO:0005615	extracellular space