PI0018667 (gene) Melon (PI 482460) v1

Overview


Name	PI0018667
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Retrotransposon protein
Location	chr11: 21463308 .. 21463808 (-)
RNA-Seq Expression	PI0018667
Synteny	PI0018667

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACACACACGACGACATTGCGTCCCTACATAACGTGTTCATAACATTCCAACGTCAGTTGCTATTGACGTTGAAATTGTTAATGAATGACAACAAGAGGATAGCGCAAGTACCTTCCGACATGAGGTATAGGATTAGACAGTTGGCTTACTTTCGCATGATCCATGAAAATGACCTCGTGTGTCGTCAAAGTATGCGAATGGACAGACGATGCTTCACCATTTTATGTCATCTACTCCGAACTGTAGCTGGATTACAGTCCACTGAAATGATCGATGTCGAAGAAATGGTCACCATGTTCCTTTACATACTGGCGCACGACATGAAAAATCGTGTCATTCAACGTGAGTTCGTGCGGTCCGGTGAGACTGTTTCACGTCATTTCAACCTTGTACTGCTGACTGTTTTACGCCTCCATGATGAGCTTTTGGCGAAACCACAACCGGTGACAAACGCTTGCACAGATGCACGGTGGAGGTGGTTCGAGGTACGGTTGTAA

mRNA sequence

ATGGACACACACGACGACATTGCGTCCCTACATAACGTGTTCATAACATTCCAACGTCAGTTGCTATTGACGTTGAAATTGTTAATGAATGACAACAAGAGGATAGCGCAAGTACCTTCCGACATGAGGTATAGGATTAGACAGTTGGCTTACTTTCGCATGATCCATGAAAATGACCTCGTGTGTCGTCAAAGTATGCGAATGGACAGACGATGCTTCACCATTTTATGTCATCTACTCCGAACTGTAGCTGGATTACAGTCCACTGAAATGATCGATGTCGAAGAAATGGTCACCATGTTCCTTTACATACTGGCGCACGACATGAAAAATCGTGTCATTCAACGTGAGTTCGTGCGGTCCGGTGAGACTGTTTCACGTCATTTCAACCTTGTACTGCTGACTGTTTTACGCCTCCATGATGAGCTTTTGGCGAAACCACAACCGGTGACAAACGCTTGCACAGATGCACGGTGGAGGTGGTTCGAGGTACGGTTGTAA

Coding sequence (CDS)

ATGGACACACACGACGACATTGCGTCCCTACATAACGTGTTCATAACATTCCAACGTCAGTTGCTATTGACGTTGAAATTGTTAATGAATGACAACAAGAGGATAGCGCAAGTACCTTCCGACATGAGGTATAGGATTAGACAGTTGGCTTACTTTCGCATGATCCATGAAAATGACCTCGTGTGTCGTCAAAGTATGCGAATGGACAGACGATGCTTCACCATTTTATGTCATCTACTCCGAACTGTAGCTGGATTACAGTCCACTGAAATGATCGATGTCGAAGAAATGGTCACCATGTTCCTTTACATACTGGCGCACGACATGAAAAATCGTGTCATTCAACGTGAGTTCGTGCGGTCCGGTGAGACTGTTTCACGTCATTTCAACCTTGTACTGCTGACTGTTTTACGCCTCCATGATGAGCTTTTGGCGAAACCACAACCGGTGACAAACGCTTGCACAGATGCACGGTGGAGGTGGTTCGAGGTACGGTTGTAA

Protein sequence

MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFEVRL

Homology

[Close]

BLAST of PI0018667 vs. ExPASy TrEMBL
Match: A0A5A7VCK9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00700 PE=3 SV=1)

HSP 1 Score: 254.2 bits (648), Expect = 3.7e-64
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFLYILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLYILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.8e-64
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 4.8e-64
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.4e-63
Identity = 122/163 (74.85%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. ExPASy TrEMBL
Match: A0A5A7VHB0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00240 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.4e-63
Identity = 121/163 (74.23%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIHE+DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHESDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+ RHFN++ L V+RLHDELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETIFRHFNMIFLAVIRLHDELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. NCBI nr
Match: KAA0065893.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 254.2 bits (648), Expect = 7.7e-64
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFLYILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLYILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-63
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 253.8 bits (647), Expect = 1.0e-63
Identity = 123/163 (75.46%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLHDELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. NCBI nr
Match: KAA0065736.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 252.3 bits (643), Expect = 2.9e-63
Identity = 121/163 (74.23%), Postives = 139/163 (85.28%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIHE+DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHESDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+ RHFN++ L V+RLHDELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETIFRHFNMIFLAVIRLHDELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 252.3 bits (643), Expect = 2.9e-63
Identity = 122/163 (74.85%), Postives = 140/163 (85.89%), Query Frame = 0


Query: 1   MDTHDDIASLHNVFITFQRQLLLTLKLLMNDNKRIAQVPSDMRYRIRQLAYFRMIHENDL 60
           MD H ++AS+ N FI  QRQLLL L+LL ND KRI  +P + R+RIRQLAYFRMIH +DL
Sbjct: 1   MDEH-ELASIVNAFIASQRQLLLMLELLKNDTKRITHIPYETRHRIRQLAYFRMIHGSDL 60

Query: 61  VCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVR 120
           VCRQS RMDRRCF ILCHLLRT+AGL STE++DVEEMV MFL+ILAHD+KNRVIQREF+R
Sbjct: 61  VCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRVIQREFMR 120

Query: 121 SGETVSRHFNLVLLTVLRLHDELLAKPQPVTNACTDARWRWFE 164
           SGET+SRHFN+VLL V+RLH+ELL KPQPV N CTD RWRWFE
Sbjct: 121 SGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFE 162

[Close]

BLAST of PI0018667 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12
Identity = 37/94 (39.36%), Postives = 57/94 (60.64%), Query Frame = 0


Query: 62  CRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVIQREFVRS 121
           C ++ RMD+  F  LC LL+T   L+ T  I +E  + +FL+I+ H+++ R +Q  F  S
Sbjct: 42  CFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRAVQELFCYS 101

Query: 122 GETVSRHFNLVLLTVLRLHDELLAKPQPVTNACT 156
           GET+SRHFN VL  V+ +  +     QP +N+ T
Sbjct: 102 GETISRHFNNVLNAVIAISKDFF---QPNSNSDT 132

[Close]

BLAST of PI0018667 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 60.5 bits (145), Expect = 1.5e-09
Identity = 36/96 (37.50%), Postives = 50/96 (52.08%), Query Frame = 0


Query: 52  FRMIHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKN 111
           +R + ++   C Q +RM   CFT LC++L+T   LQ T  I +EE V MFL I  H+   
Sbjct: 56  WRRLQQDAAACLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVY 115

Query: 112 RVIQREFVRSGETVSRHFNLVLLTVLRLHDELLAKP 148
           R +   F R+ ETV R F  VL     L  + +  P
Sbjct: 116 RDVGLRFGRNQETVQRKFREVLTATELLACDYIRTP 151

[Close]

BLAST of PI0018667 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 8.3e-08
Identity = 35/96 (36.46%), Postives = 53/96 (55.21%), Query Frame = 0


Query: 55  IHENDLVCRQSMRMDRRCFTILCHLLRTVAGLQSTEMIDVEEMVTMFLYILAHDMKNRVI 114
           I+ N++ C+  +RM    FT LC +L    GLQS+  I ++E V +FL I A +   R I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 115 QREFVRSGETVSRHFNLVLLTVLRLHDELLAKPQPV 151
              F  + ET+ R F+ VL  + RL  E + +P+ V
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYI-RPRKV 111

The following BLAST results are available for this feature:

BLAST of PI0018667 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018667 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCK9	3.7e-64	75.46	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TXW1	4.8e-64	75.46	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7SWD8	4.8e-64	75.46	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BDX0	1.4e-63	74.85	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VHB0	1.4e-63	74.23	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0018667 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065893.1	7.7e-64	75.46	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046727.1	1.0e-63	75.46	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]
KAA0034843.1	1.0e-63	75.46	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0065736.1	2.9e-63	74.23	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0035620.1	2.9e-63	74.85	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]

BLAST of PI0018667 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.1e-12	39.36	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	1.5e-09	37.50	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28730.1	8.3e-08	36.46	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 33..163
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 33..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018667.1	PI0018667.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046872	metal ion binding