Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACAAGGAAGAAGCTCTTCATTTGACAAAGAGACCCGATTCAAAGATCGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCATAATAACTTGGATTGTGAGGAACCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGTTGCTCGTACTAGATCAACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGAAGGAAAATGTGGCCGAAGTTGATACCAACATGTCGGACCCCAAAGAGACAAGAGGTCGGACTAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTACAACGAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGCTAGTAAATGTTAAAACGTGGAAGAAACTTTCAACGAGACAGAAAGAAATATTGACATTCTATTATGTATAA
mRNA sequence
ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACAAGGAAGAAGCTCTTCATTTGACAAAGAGACCCGATTCAAAGATCGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCATAATAACTTGGATTGTGAGGAACCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGTTGCTCGTACTAGATCAACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGAAGGAAAATGTGGCCGAAGTTGATACCAACATGTCGGACCCCAAAGAGACAAGAGGTCGGACTAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTACAACGAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGCTAGTAAATGTTAAAACGTGGAAGAAACTTTCAACGAGACAGAAAGAAATATTGACATTCTATTATGTATAA
Coding sequence (CDS)
ATGGACTTAACTCAACCCGATAGCGATGATGAGGAGAACAAGGAAGAAGCTCTTCATTTGACAAAGAGACCCGATTCAAAGATCGTAAATGATACAGATAATGTCGCCAAGCCTAGTATCGAGAGAGAGATTAGGGAAACATCACCTTCTCCTGACCCACTTCACCATAATAACTTGGATTGTGAGGAACCTGCTACTCCACTTCCATCTTCTCATGTTAATGAGATTATTCATCCTCAGTCTAAAAGACCACAAAATAGACCATTAGACTCACCTGTTGCTCGTACTAGATCAACAGTTCGTAGATTACCCATTGAAGAGGTTCAATCTCAGTCGAAGGAAAATGTGGCCGAAGTTGATACCAACATGTCGGACCCCAAAGAGACAAGAGGTCGGACTAAGATGCAAACAATAGCGGTGGAGCCAGAAATGAAACTAAATATAAGGTACAACGAATATGGACAACCTATTGGAGAAACATCAGTTGGGTTGTCCTCATTTTTGGGTTCACTTGTCAGAGAAGTGGTGCTAGTAAATGTTAAAACGTGGAAGAAACTTTCAACGAGACAGAAAGAAATATTGACATTCTATTATGTATAA
Protein sequence
MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLDCEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKENVAEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVVLVNVKTWKKLSTRQKEILTFYYV
Homology
BLAST of PI0018651 vs. ExPASy TrEMBL
Match:
A0A5A7UBP2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G00210 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 5.3e-57
Identity = 132/198 (66.67%), Postives = 146/198 (73.74%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS+RP NRPLDSP RTRS VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV+TWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0018651 vs. ExPASy TrEMBL
Match:
A0A5A7SRN7 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00120 PE=4 SV=1)
HSP 1 Score: 230.7 bits (587), Expect = 5.3e-57
Identity = 132/198 (66.67%), Postives = 146/198 (73.74%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS+RP NRPLDSP RTRS VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV+TWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0018651 vs. ExPASy TrEMBL
Match:
A0A5A7TIU1 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G002550 PE=4 SV=1)
HSP 1 Score: 228.4 bits (581), Expect = 2.6e-56
Identity = 131/198 (66.16%), Postives = 145/198 (73.23%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQSKRP NRPLDSP TRS VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VN++TWKK+STRQKEIL
Sbjct: 181 PVNIETWKKISTRQKEIL 173
BLAST of PI0018651 vs. ExPASy TrEMBL
Match:
A0A5A7TLJ2 (Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003690 PE=4 SV=1)
HSP 1 Score: 227.3 bits (578), Expect = 5.8e-56
Identity = 130/198 (65.66%), Postives = 145/198 (73.23%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS++P NRPLDSP RTR VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV+TWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0018651 vs. ExPASy TrEMBL
Match:
A0A5A7UNU1 (Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold226G00350 PE=4 SV=1)
HSP 1 Score: 224.9 bits (572), Expect = 2.9e-55
Identity = 130/198 (65.66%), Postives = 143/198 (72.22%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS+RP NRPLDSP RTRS VR+L +EEV+SQ +EN
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+L REVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV TWKK+STRQKEIL
Sbjct: 181 PVNVATWKKISTRQKEIL 173
BLAST of PI0018651 vs. NCBI nr
Match:
KAA0032201.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 230.7 bits (587), Expect = 1.1e-56
Identity = 132/198 (66.67%), Postives = 146/198 (73.74%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS+RP NRPLDSP RTRS VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV+TWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0018651 vs. NCBI nr
Match:
KAA0051001.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 230.7 bits (587), Expect = 1.1e-56
Identity = 132/198 (66.67%), Postives = 146/198 (73.74%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS+RP NRPLDSP RTRS VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV+TWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0018651 vs. NCBI nr
Match:
KAA0041269.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 228.4 bits (581), Expect = 5.4e-56
Identity = 131/198 (66.16%), Postives = 145/198 (73.23%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQSKRP NRPLDSP TRS VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSKRPPNRPLDSPAGCTRSAVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VN++TWKK+STRQKEIL
Sbjct: 181 PVNIETWKKISTRQKEIL 173
BLAST of PI0018651 vs. NCBI nr
Match:
KAA0042856.1 (Plant transposase [Cucumis melo var. makuwa])
HSP 1 Score: 227.3 bits (578), Expect = 1.2e-55
Identity = 130/198 (65.66%), Postives = 145/198 (73.23%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPLP----- 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS++P NRPLDSP RTR VR+LP+EEV+SQ +EN
Sbjct: 61 -EEATTPLPSSHVNATIHPQSRKPPNRPLDSPAGRTRLVVRKLPVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+LVREVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLVREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV+TWKK+STRQKEIL
Sbjct: 181 PVNVETWKKISTRQKEIL 173
BLAST of PI0018651 vs. NCBI nr
Match:
KAA0056267.1 (uncharacterized protein E6C27_scaffold226G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 224.9 bits (572), Expect = 6.0e-55
Identity = 130/198 (65.66%), Postives = 143/198 (72.22%), Query Frame = 0
Query: 1 MDLTQPDSDDEENKEEALHLTKRPDSKIVNDTDNVAKPSIEREIRETSPSPDPLHHNNLD 60
MDLTQP +DDEEN+ EALHL E+EIRETSP PDPL
Sbjct: 1 MDLTQPSTDDEENEGEALHLR-------------------EKEIRETSPLPDPL------ 60
Query: 61 CEEPATPLPSSHVNEIIHPQSKRPQNRPLDSPVARTRSTVRRLPIEEVQSQSKEN----V 120
EE TPLPSSHVN IHPQS+RP NRPLDSP RTRS VR+L +EEV+SQ +EN
Sbjct: 61 LEEATTPLPSSHVNATIHPQSRRPPNRPLDSPAGRTRSAVRKLLVEEVESQLEENENVDC 120
Query: 121 AEVDTNMSDPKETRGRTKMQTIAVEPEMKLNIRYNEYGQPIGETSVGLSSFLGSLVREVV 180
EV T PK+TRGRTKMQTIA+EPEMKL+IRYN YGQPIGETSVGLSSFLG+L REVV
Sbjct: 121 EEVHTKEPSPKKTRGRTKMQTIAMEPEMKLDIRYNGYGQPIGETSVGLSSFLGTLFREVV 173
Query: 181 LVNVKTWKKLSTRQKEIL 195
VNV TWKK+STRQKEIL
Sbjct: 181 PVNVATWKKISTRQKEIL 173
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UBP2 | 5.3e-57 | 66.67 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2606G0... | [more] |
A0A5A7SRN7 | 5.3e-57 | 66.67 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold219G00... | [more] |
A0A5A7TIU1 | 2.6e-56 | 66.16 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G00... | [more] |
A0A5A7TLJ2 | 5.8e-56 | 65.66 | Plant transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003... | [more] |
A0A5A7UNU1 | 2.9e-55 | 65.66 | Transposase_23 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
Match Name | E-value | Identity | Description | |