PI0018566 (gene) Melon (PI 482460) v1

Overview


Name	PI0018566
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	DUF4283 domain-containing protein
Location	chr11: 21309711 .. 21310137 (-)
RNA-Seq Expression	PI0018566
Synteny	PI0018566

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCAAAAACAGAAAGAGGTTTCCTTCTCCTTCAAACCATTTCATGCTGACAAGGCTTTGATTTCTTTTGCAGACCCGATGCATGCAAAGCTACTTTGCAACAACAAAAGCAAAGGACGGACTACAGTTAGGAATTTTTATGTAAAATTCGAACTTTGGTCACAAAAGAAACATGCATTTCCAAAACTCATTCCAAGCTATGGGGGATGGACTACGTTCAGGGGCATTCCACTGCATGCATGGAATCTTGATACATTTACCCAAATAGGAAATGCATGTAGGGGGGTTCATTGCAATTGACAAGGAAACTCATAATTGCTCCTTTCTAGTGGAAGCTTGTATTAAAGTACGATACAATTATTTAGGCTTTCTCCCAGCATTTGTGAGCTTTATTGACAAAAATGGGACTAACCATACGGTCTAG

mRNA sequence

ATGTTGCAAAAACAGAAAGAGGTTTCCTTCTCCTTCAAACCATTTCATGCTGACAAGGCTTTGATTTCTTTTGCAGACCCGATGCATGCAAAGCTACTTTGCAACAACAAAAGCAAAGGACGGACTACAGTTAGGAATTTTTATGTAAAATTCGAACTTTGGTCACAAAAGAAACATGCATTTCCAAAACTCATTCCAAGCTATGGGGGATGGACTACGTTCAGGGGCATTCCACTGCATGCATGGAATCTTGATACATTTACCCAAATAGGAAATGAAACTCATAATTGCTCCTTTCTAGTGGAAGCTTGTATTAAAGTACGATACAATTATTTAGGCTTTCTCCCAGCATTTGTGAGCTTTATTGACAAAAATGGGACTAACCATACGGTCTAG

Coding sequence (CDS)

ATGTTGCAAAAACAGAAAGAGGTTTCCTTCTCCTTCAAACCATTTCATGCTGACAAGGCTTTGATTTCTTTTGCAGACCCGATGCATGCAAAGCTACTTTGCAACAACAAAAGCAAAGGACGGACTACAGTTAGGAATTTTTATGTAAAATTCGAACTTTGGTCACAAAAGAAACATGCATTTCCAAAACTCATTCCAAGCTATGGGGGATGGACTACGTTCAGGGGCATTCCACTGCATGCATGGAATCTTGATACATTTACCCAAATAGGAAATGAAACTCATAATTGCTCCTTTCTAGTGGAAGCTTGTATTAAAGTACGATACAATTATTTAGGCTTTCTCCCAGCATTTGTGAGCTTTATTGACAAAAATGGGACTAACCATACGGTCTAG

Protein sequence

MLQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAFPKLIPSYGGWTTFRGIPLHAWNLDTFTQIGNETHNCSFLVEACIKVRYNYLGFLPAFVSFIDKNGTNHTV

Homology

[Close]

BLAST of PI0018566 vs. ExPASy TrEMBL
Match: A0A5D3CUI3 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00540 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.5e-33
Identity = 74/130 (56.92%), Postives = 86/130 (66.15%), Query Frame = 0


Query: 7   EVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAFPKLIP 66
           E SFSF PFHADKA+++F DP  A LLCNN     +T+ +FYV+FE WS KKHA P L+P
Sbjct: 2   ETSFSFSPFHADKAIVTFKDPTQATLLCNNNE--WSTIGSFYVRFEKWSFKKHAAPILVP 61

Query: 67  SYGGWTTFRGIPLHAWNLDTFTQIGN----------ETHNCSFLVEACIKVRYNYLGFLP 126
           SYGGW +FRGIPL AW  DTF QIGN          ET     LVEA IK+RYNY  F+P
Sbjct: 62  SYGGWVSFRGIPLSAWKTDTFIQIGNACRGFLDVAKETKTRKNLVEARIKIRYNYSSFIP 121

[Close]

BLAST of PI0018566 vs. ExPASy TrEMBL
Match: A0A5D3DJE1 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001100 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 3.5e-33
Identity = 76/140 (54.29%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F+  + A LLC N  KG TTV  + V+FE WS   HA 
Sbjct: 222 LRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQN--KGWTTVGKYSVRFEKWSSAYHAT 281

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF QIG           ET +   L+EA IKVRYNY
Sbjct: 282 PKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEETKSAKNLIEARIKVRYNY 341

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA V   D  G   ++
Sbjct: 342 SGFLPANVRIFDNEGNKFSI 359

[Close]

BLAST of PI0018566 vs. ExPASy TrEMBL
Match: A0A5D3DKV0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00050 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.6e-33
Identity = 76/140 (54.29%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F+  + A LLC N  KG TTV  + VKFE WS   HA 
Sbjct: 222 LRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQN--KGWTTVGKYSVKFEKWSSAYHAT 281

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF Q+G           ET +   LV+A IKVRYNY
Sbjct: 282 PKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNY 341

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA V   D  G   ++
Sbjct: 342 SGFLPANVRIFDNEGNKFSI 359

[Close]

BLAST of PI0018566 vs. ExPASy TrEMBL
Match: A0A5A7UST0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G00700 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.6e-33
Identity = 76/140 (54.29%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F+  + A LLC N  KG TTV  + VKFE WS   HA 
Sbjct: 222 LRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQN--KGWTTVGKYSVKFEKWSSAYHAT 281

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF Q+G           ET +   LV+A IKVRYNY
Sbjct: 282 PKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNY 341

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA V   D  G   ++
Sbjct: 342 SGFLPANVRIFDNEGNKFSI 359

[Close]

BLAST of PI0018566 vs. ExPASy TrEMBL
Match: A0A5A7SVM5 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00850 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 4.6e-33
Identity = 74/140 (52.86%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F   + A LLC N  KG TTV  + V+FE W+   HA 
Sbjct: 227 LRKQTEESFTYNAFHAEKALVHFNSNVPANLLCQN--KGWTTVGKYMVRFEKWAPASHAS 286

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF QIG           ET     L+EA +K+RYNY
Sbjct: 287 PKLIPSYGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNY 346

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA+V   D+ G    V
Sbjct: 347 SGFLPAYVKIFDQEGNKFVV 364

[Close]

BLAST of PI0018566 vs. NCBI nr
Match: TYK23598.1 (hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 7.2e-33
Identity = 76/140 (54.29%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F+  + A LLC N  KG TTV  + V+FE WS   HA 
Sbjct: 222 LRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQN--KGWTTVGKYSVRFEKWSSAYHAT 281

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF QIG           ET +   L+EA IKVRYNY
Sbjct: 282 PKLIPSYGGWTTFRGIPLHLWNMTTFQQIGKACGGLIKVAEETKSAKNLIEARIKVRYNY 341

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA V   D  G   ++
Sbjct: 342 SGFLPANVRIFDNEGNKFSI 359

[Close]

BLAST of PI0018566 vs. NCBI nr
Match: KAA0065895.1 (hypothetical protein E6C27_scaffold538G00730 [Cucumis melo var. makuwa] >TYK15122.1 hypothetical protein E5676_scaffold259G00540 [Cucumis melo var. makuwa])

HSP 1 Score: 151.0 bits (380), Expect = 7.2e-33
Identity = 74/130 (56.92%), Postives = 86/130 (66.15%), Query Frame = 0


Query: 7   EVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAFPKLIP 66
           E SFSF PFHADKA+++F DP  A LLCNN     +T+ +FYV+FE WS KKHA P L+P
Sbjct: 2   ETSFSFSPFHADKAIVTFKDPTQATLLCNNNE--WSTIGSFYVRFEKWSFKKHAAPILVP 61

Query: 67  SYGGWTTFRGIPLHAWNLDTFTQIGN----------ETHNCSFLVEACIKVRYNYLGFLP 126
           SYGGW +FRGIPL AW  DTF QIGN          ET     LVEA IK+RYNY  F+P
Sbjct: 62  SYGGWVSFRGIPLSAWKTDTFIQIGNACRGFLDVAKETKTRKNLVEARIKIRYNYSSFIP 121

[Close]

BLAST of PI0018566 vs. NCBI nr
Match: KAA0056565.1 (hypothetical protein E6C27_scaffold288G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 9.4e-33
Identity = 76/140 (54.29%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F+  + A LLC N  KG TTV  + VKFE WS   HA 
Sbjct: 222 LRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQN--KGWTTVGKYSVKFEKWSSAYHAT 281

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF Q+G           ET +   LV+A IKVRYNY
Sbjct: 282 PKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNY 341

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA V   D  G   ++
Sbjct: 342 SGFLPANVRIFDNEGNKFSI 359

[Close]

BLAST of PI0018566 vs. NCBI nr
Match: KAA0034016.1 (hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 9.4e-33
Identity = 74/140 (52.86%), Postives = 89/140 (63.57%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F   + A LLC N  KG TTV  + V+FE W+   HA 
Sbjct: 227 LRKQTEESFTYNAFHAEKALVHFNSNVPANLLCQN--KGWTTVGKYMVRFEKWAPASHAS 286

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF QIG           ET     L+EA +K+RYNY
Sbjct: 287 PKLIPSYGGWTTFRGIPLHLWNMKTFQQIGKACGGLLKVAEETKTARNLIEAKLKIRYNY 346

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA+V   D+ G    V
Sbjct: 347 SGFLPAYVKIFDQEGNKFVV 364

[Close]

BLAST of PI0018566 vs. NCBI nr
Match: TYK24247.1 (hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 150.6 bits (379), Expect = 9.4e-33
Identity = 76/140 (54.29%), Postives = 90/140 (64.29%), Query Frame = 0


Query: 2   LQKQKEVSFSFKPFHADKALISFADPMHAKLLCNNKSKGRTTVRNFYVKFELWSQKKHAF 61
           L+KQ E SF++  FHA+KAL+ F+  + A LLC N  KG TTV  + VKFE WS   HA 
Sbjct: 222 LRKQTEESFTYNAFHAEKALVHFSSNIPANLLCQN--KGWTTVGKYSVKFEKWSSAYHAT 281

Query: 62  PKLIPSYGGWTTFRGIPLHAWNLDTFTQIG----------NETHNCSFLVEACIKVRYNY 121
           PKLIPSYGGWTTFRGIPLH WN+ TF Q+G           ET +   LV+A IKVRYNY
Sbjct: 282 PKLIPSYGGWTTFRGIPLHLWNMTTFQQLGKACGGLIKVAEETRSAKNLVKARIKVRYNY 341

Query: 122 LGFLPAFVSFIDKNGTNHTV 132
            GFLPA V   D  G   ++
Sbjct: 342 SGFLPANVRIFDNEGNKFSI 359

The following BLAST results are available for this feature:

BLAST of PI0018566 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018566 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CUI3	3.5e-33	56.92	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DJE1	3.5e-33	54.29	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3DKV0	4.6e-33	54.29	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UST0	4.6e-33	54.29	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7SVM5	4.6e-33	52.86	DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of PI0018566 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK23598.1	7.2e-33	54.29	hypothetical protein E5676_scaffold500G001100 [Cucumis melo var. makuwa]	[more]
KAA0065895.1	7.2e-33	56.92	hypothetical protein E6C27_scaffold538G00730 [Cucumis melo var. makuwa] >TYK1512...	[more]
KAA0056565.1	9.4e-33	54.29	hypothetical protein E6C27_scaffold288G00700 [Cucumis melo var. makuwa]	[more]
KAA0034016.1	9.4e-33	52.86	hypothetical protein E6C27_scaffold400G00850 [Cucumis melo var. makuwa]	[more]
TYK24247.1	9.4e-33	54.29	hypothetical protein E5676_scaffold205G00050 [Cucumis melo var. makuwa]	[more]

BLAST of PI0018566 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018566.1	PI0018566.1	mRNA