PI0018560 (gene) Melon (PI 482460) v1

Overview


Name	PI0018560
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Gag/pol protein
Location	chr09: 6212794 .. 6215454 (-)
RNA-Seq Expression	PI0018560
Synteny	PI0018560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGATCTTCAAGTCAAGATCAGATTAGAGTACGTTCTGATGGACCTGAATTAGAACGACCCACATCGCAGACAAGTGGCGAACACAAAACGCCACAATACATCCACTTGAAGCACGGCAAGGGGAAGGTTCTACTGAAACCTCCGCCGGAAGCAGCTGAAAATTTCTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCAGTGCTCAAATTTCTTAATGAACGAGCAAAGAAAAGGAAGGAAGCCCACATCAAAAGAACTAAGGAAGCTCGTCGCCGAAAGAACGAGCGTGAGCGAACGAGAATTGACACAACTCGAAAGGCGAAGAGCACCCTGGAAATACGCTCACCGCCTAACGAGATCGCGGAGCTTCACAAGAAGATCTCTGATAAGCTCGCACAAGTCTCGTTCGCTAAAACAAGGAAAACTATCGAGGCAGTTAAGGTTGCCTTAAAAAGAAAAGAAGAAAAGAAAAAGATGTTCGCAGAGTTGAGCGAACAAGTGGCAGAGCTCCCCGCGAAAGCAAGACCATTGGAGCCGGAAAGGAACCTCGACGCAATCGTTGAAGAATTCGAGGAAGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCGCAGGACCATCAAGAGGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACGCCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTTTCCGTTCAATGGTCAACTCCCTGACTTCCTCTACGCGCCAATTCAGGCGTTTGGATGGAAGTCATTTTTCAAGGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAATTCTACGCGGCTAAACTCAACGCTGAAGAGTTTAGCGTACAAATCAGTGGAAAGACAATGAGTTTCAATGCGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTTGAAACCCCAGGGCAATTATACGTAGAAAGTCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTACCCACACCAACTGACCACTGAAGCAAGCGTGTGGCTATTCTTTATCAAGAAGAAAATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTTAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCGTTGAGGCCCTTTGCCTTAAAGCCTTGCCATTCCTATCCGCCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAAGAAATGGAAAGGCGGGCAAAGACATTAGGAGACACACCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCACTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAACTTCCACTAAAATTTTCCCACTCCTCATCTCGCCCAATACAGCGAGTCCCACCATCAGTCCAAAATTCCAGCAACTCCAATCCCCCCCGCGCTTCTTCGCCCATTCCAATCACTCCACCATCCCCAAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTCGTTCTCCCACTAACATCCCTCACCTTTCCCCACGACCGACTACACCTCCACCCACAAAATCTACTTCCCCCTTTCATTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCCTGGACCTGACCGTTCTTCGCCATGACCAACCCGCGACTAACACTGCGGTCGTTGAGGTTTCTTCGCCCATCACCCATCCAACCAACCGTCCTCTACAACCTTCCCCCATTCTTCTAATCTCAGAAGAGAGCACACCTCCCACCAACCACCAATCCCAACAATCACCACCACCGCCCATTATGGCCGCTGCGGAAAAAGTTGATGACCCACACGTTAAGGACAAAAACCCCATCCTTAATGAAGTTGGCGAGACTGCCTCCTCTGCGCATACCCCCATCGCTCCACTTTCTACCACACCAGGCGACGAAGATTTCGCAGAAATGCTGGGTTCCCTTGTATGTAAACCAATGATGGAGCAATTCGAACATATTTTGGCTAATCAAGGGGACCAGGCGGCGCAACTCCACAGTTTGCAAACGCGAGTTGAGCAGTTGCAGCGTCCCAGTGCCGAAAATCTTATAATGCCCGCATCTCAAGCAGACATTAATGTTCTGCGAAGCGAAATAAGGGATCTTTCGGCGAACAACGCCCAGATCTCCACCACAGTCTCCAACCTCTTCACCACCGTCTCCAACCTCACCTCCTTGGTCATGGCTCAATCAGAAATGATGCGGCAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGGAATATACATATGCAGCAATTGTGCAACGCGTGCCTGCCCCAATCATACCGCCAGATCTCAAAGCACCCTTCCCACCAATCACGCGTCCTGGCGATCCTGACCCCCGCCAAGACAATTAA

mRNA sequence

ATGGCCGGATCTTCAAGTCAAGATCAGATTAGAGTACGTTCTGATGGACCTGAATTAGAACGACCCACATCGCAGACAAGTGGCGAACACAAAACGCCACAATACATCCACTTGAAGCACGGCAAGGGGAAGGTTCTACTGAAACCTCCGCCGGAAGCAGCTGAAAATTTCTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCAGTGCTCAAATTTCTTAATGAACGAGCAAAGAAAAGGAAGGAAGCCCACATCAAAAGAACTAAGGAAGCTCGTCGCCGAAAGAACGAGCGTGAGCGAACGAGAATTGACACAACTCGAAAGGCGAAGAGCACCCTGGAAATACGCTCACCGCCTAACGAGATCGCGGAGCTTCACAAGAAGATCTCTGATAAGCTCGCACAAGTCTCGTTCGCTAAAACAAGGAAAACTATCGAGGCAGTTAAGGTTGCCTTAAAAAGAAAAGAAGAAAAGAAAAAGATGTTCGCAGAGTTGAGCGAACAAGTGGCAGAGCTCCCCGCGAAAGCAAGACCATTGGAGCCGGAAAGGAACCTCGACGCAATCGTTGAAGAATTCGAGGAAGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCGCAGGACCATCAAGAGGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACGCCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTTTCCGTTCAATGGTCAACTCCCTGACTTCCTCTACGCGCCAATTCAGGCGTTTGGATGGAAGTCATTTTTCAAGGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAATTCTACGCGGCTAAACTCAACGCTGAAGAGTTTAGCGTACAAATCAGTGGAAAGACAATGAGTTTCAATGCGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTTGAAACCCCAGGGCAATTATACGTAGAAAGTCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTACCCACACCAACTGACCACTGAAGCAAGCGTGTGGCTATTCTTTATCAAGAAGAAAATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTTAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCGTTGAGGCCCTTTGCCTTAAAGCCTTGCCATTCCTATCCGCCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAAGAAATGGAAAGGCGGGCAAAGACATTAGGAGACACACCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCACTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAACTTCCACTAAAATTTTCCCACTCCTCATCTCGCCCAATACAGCGAGTCCCACCATCAGTCCAAAATTCCAGCAACTCCAATCCCCCCCGCGCTTCTTCGCCCATTCCAATCACTCCACCATCCCCAAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTCGTTCTCCCACTAACATCCCTCACCTTTCCCCACGACCGACTACACCTCCACCCACAAAATCTACTTCCCCCTTTCATTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCCTGGACCTGACCGTTCTTCGCCATGACCAACCCGCGACTAACACTGCGGTCGTTGAGGTTTCTTCGCCCATCACCCATCCAACCAACCGTCCTCTACAACCTTCCCCCATTCTTCTAATCTCAGAAGAGAGCACACCTCCCACCAACCACCAATCCCAACAATCACCACCACCGCCCATTATGGCCGCTGCGGAAAAAGTTGATGACCCACACGTTAAGGACAAAAACCCCATCCTTAATGAAGTTGGCGAGACTGCCTCCTCTGCGCATACCCCCATCGCTCCACTTTCTACCACACCAGGCGACGAAGATTTCGCAGAAATGCTGGGTTCCCTTGTATGTAAACCAATGATGGAGCAATTCGAACATATTTTGGCTAATCAAGGGGACCAGGCGGCGCAACTCCACAGTTTGCAAACGCGAGTTGAGCAGTTGCAGCGTCCCAGTGCCGAAAATCTTATAATGCCCGCATCTCAAGCAGACATTAATGTTCTGCGAAGCGAAATAAGGGATCTTTCGGCGAACAACGCCCAGATCTCCACCACAGTCTCCAACCTCTTCACCACCGTCTCCAACCTCACCTCCTTGGTCATGGCTCAATCAGAAATGATGCGGCAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGGAATATACATATGCAGCAATTGTGCAACGCGTGCCTGCCCCAATCATACCGCCAGATCTCAAAGCACCCTTCCCACCAATCACGCGTCCTGGCGATCCTGACCCCCGCCAAGACAATTAA

Coding sequence (CDS)

ATGGCCGGATCTTCAAGTCAAGATCAGATTAGAGTACGTTCTGATGGACCTGAATTAGAACGACCCACATCGCAGACAAGTGGCGAACACAAAACGCCACAATACATCCACTTGAAGCACGGCAAGGGGAAGGTTCTACTGAAACCTCCGCCGGAAGCAGCTGAAAATTTCTTGGAAGTTGAAGTTGATAATCAGGATACAGAGGCAGTGCTCAAATTTCTTAATGAACGAGCAAAGAAAAGGAAGGAAGCCCACATCAAAAGAACTAAGGAAGCTCGTCGCCGAAAGAACGAGCGTGAGCGAACGAGAATTGACACAACTCGAAAGGCGAAGAGCACCCTGGAAATACGCTCACCGCCTAACGAGATCGCGGAGCTTCACAAGAAGATCTCTGATAAGCTCGCACAAGTCTCGTTCGCTAAAACAAGGAAAACTATCGAGGCAGTTAAGGTTGCCTTAAAAAGAAAAGAAGAAAAGAAAAAGATGTTCGCAGAGTTGAGCGAACAAGTGGCAGAGCTCCCCGCGAAAGCAAGACCATTGGAGCCGGAAAGGAACCTCGACGCAATCGTTGAAGAATTCGAGGAAGAGCTGGAGGCGATGAGCCCACTTGATGACGGGCCATCGCCAAGAAAATCAAGGGAGGTCGCAGGACCATCAAGAGGAAGAAAGAAACTTGGACGTTCTGGACCTGAAGAACGCCTATCAGGCGGCGACACCATAAGCAAGACACCCTCTATCAACTCTCTCATCAAAGTTGAAAAGGGGTTGTTTCCGTTCAATGGTCAACTCCCTGACTTCCTCTACGCGCCAATTCAGGCGTTTGGATGGAAGTCATTTTTCAAGGGGCACACCAAGATACGATTAGGAGTGGTAGAAAAATTCTACGCGGCTAAACTCAACGCTGAAGAGTTTAGCGTACAAATCAGTGGAAAGACAATGAGTTTCAATGCGGAGGCCATCAATGCGTTGTATGATTTGCCCAACAACGTTGAAACCCCAGGGCAATTATACGTAGAAAGTCCTACGAAGAGGATGGCCCGTGAAGCGTTGGAAGTCATCGCATGGCCTGGGGCCGCATGGGAAGTAACGCCAACAGGGAAGTATCAGTTGTACCCACACCAACTGACCACTGAAGCAAGCGTGTGGCTATTCTTTATCAAGAAGAAAATCTTCCCAACACGCCATGATAGCACCATCAATTTGGAGTTAGCGATGCTACTCTATTGCATCCTAGCAAAGAAGCGTGTTAACCTTGGCGAACTTATAGCCACATCCATTCTGGCATGGATGCGAGCTCCCAAAGGCGCGATGCCCTTCCCTTCAACCGTTGAGGCCCTTTGCCTTAAAGCCTTGCCATTCCTATCCGCCATCCAAACCATCTCAATACCTGGCGGACTGTGTAATCAAATGGCCTTAAACCGCATGATTACTTTCCATGGACACAAAGAAATGGAAAGGCGGGCAAAGACATTAGGAGACACACCTGAAGGAATGGCCCTAGCAGAAAGAAAAAGAAAGGCCCCACTCGTCGCATCAACCCCCCCACCTAAAGCCAAAAAAACAAAGGTTCTTGCGACGAAGCAACTTCCACTAAAATTTTCCCACTCCTCATCTCGCCCAATACAGCGAGTCCCACCATCAGTCCAAAATTCCAGCAACTCCAATCCCCCCCGCGCTTCTTCGCCCATTCCAATCACTCCACCATCCCCAAACATCTCTCCCCGCCATTCACCTCTCCCCCACATTCGTTCTCCCACTAACATCCCTCACCTTTCCCCACGACCGACTACACCTCCACCCACAAAATCTACTTCCCCCTTTCATTCCAAATCACCCTCACCAAGGCGAGCTGAACCCCTTTCGCCTTTTCTTCTTTCGCCCATCCTGGACCTGACCGTTCTTCGCCATGACCAACCCGCGACTAACACTGCGGTCGTTGAGGTTTCTTCGCCCATCACCCATCCAACCAACCGTCCTCTACAACCTTCCCCCATTCTTCTAATCTCAGAAGAGAGCACACCTCCCACCAACCACCAATCCCAACAATCACCACCACCGCCCATTATGGCCGCTGCGGAAAAAGTTGATGACCCACACGTTAAGGACAAAAACCCCATCCTTAATGAAGTTGGCGAGACTGCCTCCTCTGCGCATACCCCCATCGCTCCACTTTCTACCACACCAGGCGACGAAGATTTCGCAGAAATGCTGGGTTCCCTTGTATGTAAACCAATGATGGAGCAATTCGAACATATTTTGGCTAATCAAGGGGACCAGGCGGCGCAACTCCACAGTTTGCAAACGCGAGTTGAGCAGTTGCAGCGTCCCAGTGCCGAAAATCTTATAATGCCCGCATCTCAAGCAGACATTAATGTTCTGCGAAGCGAAATAAGGGATCTTTCGGCGAACAACGCCCAGATCTCCACCACAGTCTCCAACCTCTTCACCACCGTCTCCAACCTCACCTCCTTGGTCATGGCTCAATCAGAAATGATGCGGCAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGGAATATACATATGCAGCAATTGTGCAACGCGTGCCTGCCCCAATCATACCGCCAGATCTCAAAGCACCCTTCCCACCAATCACGCGTCCTGGCGATCCTGACCCCCGCCAAGACAATTAA

Protein sequence

MAGSSSQDQIRVRSDGPELERPTSQTSGEHKTPQYIHLKHGKGKVLLKPPPEAAENFLEVEVDNQDTEAVLKFLNERAKKRKEAHIKRTKEARRRKNERERTRIDTTRKAKSTLEIRSPPNEIAELHKKISDKLAQVSFAKTRKTIEAVKVALKRKEEKKKMFAELSEQVAELPAKARPLEPERNLDAIVEEFEEELEAMSPLDDGPSPRKSREVAGPSRGRKKLGRSGPEERLSGGDTISKTPSINSLIKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTMSFNAEAINALYDLPNNVETPGQLYVESPTKRMAREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLELAMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKALPFLSAIQTISIPGGLCNQMALNRMITFHGHKEMERRAKTLGDTPEGMALAERKRKAPLVASTPPPKAKKTKVLATKQLPLKFSHSSSRPIQRVPPSVQNSSNSNPPRASSPIPITPPSPNISPRHSPLPHIRSPTNIPHLSPRPTTPPPTKSTSPFHSKSPSPRRAEPLSPFLLSPILDLTVLRHDQPATNTAVVEVSSPITHPTNRPLQPSPILLISEESTPPTNHQSQQSPPPPIMAAAEKVDDPHVKDKNPILNEVGETASSAHTPIAPLSTTPGDEDFAEMLGSLVCKPMMEQFEHILANQGDQAAQLHSLQTRVEQLQRPSAENLIMPASQADINVLRSEIRDLSANNAQISTTVSNLFTTVSNLTSLVMAQSEMMRQIAARHDRQFRTQMEYTYAAIVQRVPAPIIPPDLKAPFPPITRPGDPDPRQDN

Homology

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BLAST of PI0018560 vs. ExPASy TrEMBL
Match: A0A5A7TZE0 (Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001090 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.6e-44
Identity = 116/297 (39.06%), Postives = 164/297 (55.22%), Query Frame = 0


Query: 147 EAVKVALKRKEEKKKMFAEL-----SEQVAELPAKARPLEPERNLDAIVEEFEEELEAMS 206
           E  KVA K +E+ +K+   L       Q  +  A+ +    E+  D   +EFE+ELE +S
Sbjct: 13  EFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELS 72

Query: 207 PLDD---GPSPRKSREVAGPS----RGRKKLGRSGPEERLSGGDTISKTPSINSLIKVEK 266
           PL+D      P+K R + G        + K  +   E + S  + +     +     +EK
Sbjct: 73  PLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEK 132

Query: 267 GLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTMS 326
           G+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N E     + GK ++
Sbjct: 133 GIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVN 192

Query: 327 FNAEAINALYDL-PNNVETPGQLYVESPTKRMAREALEVIAWPGAAWEVTPTGKYQLYPH 386
           F  + +N LY L    VE P     + P+    + ALE +AWPG  W++TP  KYQL+PH
Sbjct: 193 FGPKVVNVLYGLRQTTVEYP---IFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPH 252

Query: 387 QLTTEASVWLFFIKKKIFPTRHDSTINLELAMLLYCILAKKRVNLGELIATSILAWM 431
            L T ASVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I AW+
Sbjct: 253 NLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

[Close]

BLAST of PI0018560 vs. ExPASy TrEMBL
Match: A0A5A7V6M5 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G00020 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.3e-42
Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 285 KIRLGVVEKFYAAKLNAEEFSVQISGKTMSFNAEAINALYDLPNNVETPGQLYVESPTKR 344
           KIR+ VV KFY  K N  +  + I  +   FN E IN LY+ PN+ E  GQ  V   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 345 MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLEL 404
           +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 405 AMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKALPFLSAIQTISIP 464
            ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +E LCLK LP L      +IP
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSLVRYPEKNIP 180

[Close]

BLAST of PI0018560 vs. ExPASy TrEMBL
Match: A0A5D3CW17 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00800 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.7e-36
Identity = 89/197 (45.18%), Postives = 116/197 (58.88%), Query Frame = 0


Query: 286 IRLGVVEKFYAAKLNAEEFSVQISGKTMSFNAEAINALYDLPNNVETPGQLYVESPTKRM 345
           IR  VV  FY A +N EE   ++  K + F  +AINALY L NN    G L  E+P  R 
Sbjct: 58  IRPSVVYLFYRAYINIEELYAEVKEKRVDFGPKAINALYGLKNN--EIGHLIFENPKARD 117

Query: 346 AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLELAM 405
            ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E+ M
Sbjct: 118 LQDALENIIWPGTKWDRMPTEKYQLFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIM 177

Query: 406 LLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKALPFLSAIQTISIPGG 465
           LLY      + N  E+    ++AW++ P GA PF    + L +KA P L   Q + +  G
Sbjct: 178 LLYYNGDSNQFN--EISCEHLIAWVKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNG 237

Query: 466 LCNQMALNRMITFHGHK 483
           +C    L+R IT H +K
Sbjct: 238 VCIGPTLHRFITIHKNK 250

[Close]

BLAST of PI0018560 vs. ExPASy TrEMBL
Match: A0A5D3DVQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1142G00370 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 7.8e-36
Identity = 103/301 (34.22%), Postives = 149/301 (49.50%), Query Frame = 0


Query: 174 PAKARPLEPERNLDAIVEEFEEELEAMSPLDDGPSPRKSREVAGPSRGRKKLGRSGPEER 233
           P    P   +  +    E  EE+   +SPL++    R+ R+      G+  + R   E+ 
Sbjct: 16  PTTTNPSGRDTKIVCFDEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKT 75

Query: 234 LSGGDTISKTPSINSL-----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRL 293
               ++      + S        VEKG F F  QL  FL  PI+A GW+ F +G   IR 
Sbjct: 76  QQEEESQEIEDDVLSAEERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRS 135

Query: 294 GVVEKFYAAKLNAEEFSVQISGKTMSFNAEAINALYDLPNNVETPGQLYVESPTKRMARE 353
           GVV+ FY  K++ E+    +  +                             P+    +E
Sbjct: 136 GVVKMFYNGKIDTEKHYAIVKER---------------------------REPSDCDMQE 195

Query: 354 ALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLELAMLLY 413
           ALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLY
Sbjct: 196 ALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLY 255

Query: 414 CILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKALPFL-SAIQTISIPGGLC 469
           CI+ +  V++ E+I   I AW++ P+GA PFP  +E LCL++   L  + Q   +  G+C
Sbjct: 256 CIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMC 289

[Close]

BLAST of PI0018560 vs. ExPASy TrEMBL
Match: A0A5A7U806 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.5e-34
Identity = 83/163 (50.92%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 308  ISGKTMSFNAEAINALYDLPNNVET-PGQLYVESPTKRMAREALEVIAWPGAAWEVTPTG 367
            +  + + F  E IN LYDLPN++   PGQ  +    +  A++ +++I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 368  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLELAMLLYCILAKKRVNLGELIATSI 427
            + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 428  LAWMRAPKGAMPFPSTVEALCLKAL-PFLSAIQTISIPGGLCN 469
            L+WMR PK A PFP+TV+ LCLK L      I  I + GG CN
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

[Close]

BLAST of PI0018560 vs. NCBI nr
Match: KAA0048500.1 (protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucumis melo var. makuwa])

HSP 1 Score: 189.9 bits (481), Expect = 9.5e-44
Identity = 116/297 (39.06%), Postives = 164/297 (55.22%), Query Frame = 0


Query: 147 EAVKVALKRKEEKKKMFAEL-----SEQVAELPAKARPLEPERNLDAIVEEFEEELEAMS 206
           E  KVA K +E+ +K+   L       Q  +  A+ +    E+  D   +EFE+ELE +S
Sbjct: 13  EFYKVARKAQEKTEKLKKRLLKIKVKAQGVKALAEEKKERKEKTTDEYSKEFEKELEELS 72

Query: 207 PLDD---GPSPRKSREVAGPS----RGRKKLGRSGPEERLSGGDTISKTPSINSLIKVEK 266
           PL+D      P+K R + G        + K  +   E + S  + +     +     +EK
Sbjct: 73  PLEDRVVEKQPKKKRVLEGQDAMKREKKNKTVQREQESQKSEQEGVLFAEELGKHFMIEK 132

Query: 267 GLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRLGVVEKFYAAKLNAEEFSVQISGKTMS 326
           G+FPF GQLP FL +PI+A  WK FF+G T IR  V+  FY   +N E     + GK ++
Sbjct: 133 GIFPFKGQLPLFLTSPIKALKWKQFFEGVTTIRPSVMNLFYNGSINTERHYAIVKGKMVN 192

Query: 327 FNAEAINALYDL-PNNVETPGQLYVESPTKRMAREALEVIAWPGAAWEVTPTGKYQLYPH 386
           F  + +N LY L    VE P     + P+    + ALE +AWPG  W++TP  KYQL+PH
Sbjct: 193 FGPKVVNVLYGLRQTTVEYP---IFKEPSDIDMQNALERVAWPGMKWDITPIKKYQLFPH 252

Query: 387 QLTTEASVWLFFIKKKIFPTRHDSTINLELAMLLYCILAKKRVNLGELIATSILAWM 431
            L T ASVWL FIKK + PTRHD+TI+LE  MLLYCI+ +  +N+ E+I   I AW+
Sbjct: 253 NLKTTASVWLVFIKKNLMPTRHDNTISLERIMLLYCIMEEIPLNVDEIIYEPIEAWV 306

[Close]

BLAST of PI0018560 vs. NCBI nr
Match: KAA0062900.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 183.7 bits (465), Expect = 6.8e-42
Identity = 94/180 (52.22%), Postives = 120/180 (66.67%), Query Frame = 0


Query: 285 KIRLGVVEKFYAAKLNAEEFSVQISGKTMSFNAEAINALYDLPNNVETPGQLYVESPTKR 344
           KIR+ VV KFY  K N  +  + I  +   FN E IN LY+ PN+ E  GQ  V   TK 
Sbjct: 2   KIRMDVVHKFYDVKFNPSDLFITIEDEKFYFNVEVINELYNSPNDAEYLGQEIVTKSTKG 61

Query: 345 MAREALEVIAWPGAAWEVTPTG-KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLEL 404
           +A+EAL+V+AWPG   EV P   +YQLYPH LTT+A+VW+FF K KIFPT +DSTI+++ 
Sbjct: 62  LAKEALKVVAWPGIMSEVKPMKLRYQLYPH-LTTKANVWMFFTKNKIFPTCYDSTISMDY 121

Query: 405 AMLLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKALPFLSAIQTISIP 464
            ++LYCI+ KK +NL E+I  +IL WM  PK AMPFPS +E LCLK LP L      +IP
Sbjct: 122 TVILYCIMIKKAINLDEIIKAAILTWMEIPKEAMPFPSLMEKLCLKFLPSLVRYPEKNIP 180

[Close]

BLAST of PI0018560 vs. NCBI nr
Match: KAA0041264.1 (hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK16063.1 hypothetical protein E5676_scaffold32G00800 [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 5.6e-36
Identity = 89/197 (45.18%), Postives = 116/197 (58.88%), Query Frame = 0


Query: 286 IRLGVVEKFYAAKLNAEEFSVQISGKTMSFNAEAINALYDLPNNVETPGQLYVESPTKRM 345
           IR  VV  FY A +N EE   ++  K + F  +AINALY L NN    G L  E+P  R 
Sbjct: 58  IRPSVVYLFYRAYINIEELYAEVKEKRVDFGPKAINALYGLKNN--EIGHLIFENPKARD 117

Query: 346 AREALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLELAM 405
            ++ALE I WPG  W+  PT KYQL+P+ L TE SVWL FIKK I PTRHDSTI++E+ M
Sbjct: 118 LQDALENIIWPGTKWDRMPTEKYQLFPNDLNTEVSVWLVFIKKNIMPTRHDSTISMEIIM 177

Query: 406 LLYCILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKALPFLSAIQTISIPGG 465
           LLY      + N  E+    ++AW++ P GA PF    + L +KA P L   Q + +  G
Sbjct: 178 LLYYNGDSNQFN--EISCEHLIAWVKHPCGAKPFLCLTKQLYIKAYPELEKSQQVQVSNG 237

Query: 466 LCNQMALNRMITFHGHK 483
           +C    L+R IT H +K
Sbjct: 238 VCIGPTLHRFITIHKNK 250

[Close]

BLAST of PI0018560 vs. NCBI nr
Match: KAA0054837.1 (hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK27771.1 hypothetical protein E5676_scaffold1142G00370 [Cucumis melo var. makuwa])

HSP 1 Score: 162.5 bits (410), Expect = 1.6e-35
Identity = 103/301 (34.22%), Postives = 149/301 (49.50%), Query Frame = 0


Query: 174 PAKARPLEPERNLDAIVEEFEEELEAMSPLDDGPSPRKSREVAGPSRGRKKLGRSGPEER 233
           P    P   +  +    E  EE+   +SPL++    R+ R+      G+  + R   E+ 
Sbjct: 16  PTTTNPSGRDTKIVCFDEFGEEDWNNLSPLEEEVEDRQPRKKKKALEGQDAMRRVKKEKT 75

Query: 234 LSGGDTISKTPSINSL-----IKVEKGLFPFNGQLPDFLYAPIQAFGWKSFFKGHTKIRL 293
               ++      + S        VEKG F F  QL  FL  PI+A GW+ F +G   IR 
Sbjct: 76  QQEEESQEIEDDVLSAEERKHFMVEKGFFMFEVQLQLFLVTPIKALGWQEFLRGVIAIRS 135

Query: 294 GVVEKFYAAKLNAEEFSVQISGKTMSFNAEAINALYDLPNNVETPGQLYVESPTKRMARE 353
           GVV+ FY  K++ E+    +  +                             P+    +E
Sbjct: 136 GVVKMFYNGKIDTEKHYAIVKER---------------------------REPSDCDMQE 195

Query: 354 ALEVIAWPGAAWEVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLELAMLLY 413
           ALE +AW    W+VT   KY+L+ H LTTEASVWL FIKKK+ PTRHD+TI+ E  MLLY
Sbjct: 196 ALERVAWARKKWDVTSIKKYRLFLHNLTTEASVWLVFIKKKLMPTRHDNTISFERIMLLY 255

Query: 414 CILAKKRVNLGELIATSILAWMRAPKGAMPFPSTVEALCLKALPFL-SAIQTISIPGGLC 469
           CI+ +  V++ E+I   I AW++ P+GA PFP  +E LCL++   L  + Q   +  G+C
Sbjct: 256 CIMEEIPVDVDEIICDHIKAWVQHPRGAKPFPHLIERLCLRSCSELEQSPQIACVQDGMC 289

[Close]

BLAST of PI0018560 vs. NCBI nr
Match: KAA0049609.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 157.5 bits (397), Expect = 5.2e-34
Identity = 83/163 (50.92%), Postives = 107/163 (65.64%), Query Frame = 0


Query: 308  ISGKTMSFNAEAINALYDLPNNVET-PGQLYVESPTKRMAREALEVIAWPGAAWEVTPTG 367
            +  + + F  E IN LYDLPN++   PGQ  +    +  A++ +++I WP A    TPT 
Sbjct: 1227 VEDEKVPFTTEEINELYDLPNDLGAYPGQRLIVDCREGDAKKIIKLIVWPEADCTSTPTR 1286

Query: 368  KYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLELAMLLYCILAKKRVNLGELIATSI 427
            + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI AKK  NLG ++  + 
Sbjct: 1287 RLQLFPHQLTIEANVWLFFIKKKIFPTHHDSTILTEYALVLYCINAKKPFNLGYVMNEAF 1346

Query: 428  LAWMRAPKGAMPFPSTVEALCLKAL-PFLSAIQTISIPGGLCN 469
            L+WMR PK A PFP+TV+ LCLK L      I  I + GG CN
Sbjct: 1347 LSWMRNPKNAKPFPTTVKKLCLKYLDEEPREIPQIDMVGGKCN 1389

The following BLAST results are available for this feature:

BLAST of PI0018560 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZE0	4.6e-44	39.06	Protein MNN4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00...	[more]
A0A5A7V6M5	3.3e-42	52.22	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold683G0002...	[more]
A0A5D3CW17	2.7e-36	45.18	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3DVQ6	7.8e-36	34.22	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U806	2.5e-34	50.92	Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold163G00620 PE...	[more]

BLAST of PI0018560 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048500.1	9.5e-44	39.06	protein MNN4-like [Cucumis melo var. makuwa] >TYK28291.1 protein MNN4-like [Cucu...	[more]
KAA0062900.1	6.8e-42	52.22	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0041264.1	5.6e-36	45.18	hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa] >TYK160...	[more]
KAA0054837.1	1.6e-35	34.22	hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa] >TYK2777...	[more]
KAA0049609.1	5.2e-34	50.92	transposase [Cucumis melo var. makuwa]	[more]

BLAST of PI0018560 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 75..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 503..619
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 668..686
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 668..690
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 560..575
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 866..886
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 197..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 530..559

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018560.1	PI0018560.1	mRNA