PI0018547 (gene) Melon (PI 482460) v1

Overview
NamePI0018547
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description30S ribosomal protein S6 alpha, chloroplastic
Locationchr09: 1345093 .. 1348681 (-)
RNA-Seq ExpressionPI0018547
SyntenyPI0018547
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGCGCCTACAGGCTACAACACAGGTCAGAAAAACTACATTAGTTCTCGCCTTATTTGAAAAATTCCTTTTTTTTCTTTTATATTTTATCACATTAGTGATGCATTCTCCGTCCATCAAGTACCAAGTGATTTCAGCATGCAAATGCATTTCTAGGTCTCTAGTTGATGTGTAGAGAAGTTTTCTACTTAGAAGTTGCAAGGTTCTTCGCCTTCTGCTCAAGTATCATTTTCCGACATGCTCATTTATTTCCTCTATTTATAGGTATAACTATAAACAGCAAAAAAGATTGATCTCTCAAGTTTGTTTATGTATAGACTTTGGATCGGAAAAAACTTTAATAATGATATTGTGCTATATATTCTAAATATTTACGTTGGAATGAAGTAAATTATGTTTTTTTTCTAACTTAAATCTAGTTTAACATATATCCTCGACTATAAGGTTAAAGATTTTAATCTTTTACCTTCACATGTTTGAACTTGAACCGAAAAAACGAAAAAACGAAAAAACTCTATTCTTACCTAGTTAATTGAACCATAGTCATTTTCTTCTTTTAACTTTTATCTATTACGATTTTTATTTTTAGATCCAACAAAATACAATCAACCTGATTTATATAATACAAGTTGAATTATAAGTTTGTTTGGATTTAAGTTGAGATTGGATAAATTAAAATTTTATAGAGTTGGACACATTTAGCCTAAGTCAAAAGTCATTAGAGTTGAGCAATTTATTAGACATTTCAAAGTTCAGAAACTAAACAAACACAAATTTGAAAGTTCAAACCTAAACTTGTCGAAGTGAGAATTTGATCACAAATCCACATCAAATCTTGGTTGAGGCGTCTTAGTCGGGTAGTCAAGCTAAATTGAAAGGAAGATATATTGGTATGGTGTTATGCTTGTTATGCACGACAATTAATGATACTTAGGTAAGTTAGGTTAACTAGAAAAATAGCTTTCACCACAAAAAAATTAACTTCGGAAAAATCTGACTTGATCCAGATAACTTCAAGCGACTTAGAATCTACAACCACATTTTGTTAACATAATAATTTGTCCAGACTCGATGAAAAACAAGGGTTCAGTTAAAGTGATTTTATTAGATTAAAAAATAACTCTATGTGGGTGGATTTTTACACTTTTACCAAAAATCAACGTGGTGTTTCCATCCCTCTTGAAGGCTCTATTATCCTGCACCAAGGTGTATACCCTCTTATCCATATCTACTTCATTTCAACGATTCCACTATGCTATCTCCTTGTTGCCACTGAATTTCGAGTCTGCGCCAATAGCAGAACTCGTTCGAAATAACATGGCATTCACTTCCACTCTCACCGCTACTTCTTCAACTTCTCCGCTCTCCTCCAAATCCCCTTCCCTTCCCCCATTCACGAATCAAATTTCTTCCCCTTTACCCTCAAACTCTCCAAACCCCTCTTTTCTCCCGACGGAATCGGCCCTGCTTTGGGTCTCAGATTGTCCGTAAAAGCGCAAACTCTTGAATTTTCAGGTTCGTTCTTCGAAGGTGGGCTCGGAAGTCAGGATGAACCGCCTGCCCCTCCAGGAACAGGATTTGCCACTGCCCTCGAAGATAAGGAGGAGCCTCAGTGCCCTCCTGGACTTCGAAAGTACGAGACTATGGTGGTTTTGAGGCCCGACATGTCTGAAGACGAGAGACTCGCTTTCACCGAGAAATACGAAGAGGTAGTATCATCTCTGAAATGTTGCTACTGTGTTGTTGTCTTTTCCCTTCTGTAATTCTCTTTGGTTTCTGAGGAAAGACCAAAGGAAAACGGAAATTTGTTTAGACTAGTTTCATATCTGAGAGAGAATTCAGTTTGTTGCTCTGTTTAAATTGGGTTTAAGATCACTTACTCCTTGGGGCCTTTCTGGGAAGCCACATAAGAAGTAATGAGGTGGGAGATTGTCATTGTCTGAATCCGAACACATTATTCAAGTAATGGATAGCTCATGAAAACTTAGGCTGTAGTTAATGAAAACCAGTAGCTTTTATGGAAACGCAGTTGAAAAATTCTAATATATGAGTTTACCTGTATGCTCTGTTTGAGTGTCTGGTTCCCAAGAAGAGGGAACCTTTTGCCGTGTCAGCCTTCTAAGTCCTATGGAGACACTAGTGATGAGAATTTCACGTTAGAGAGATGGAGCGACACATGAGCCACTCCTCTTGTTGCTAATTGATTTTTATATGAAACTCTATGTTTATCTAATATGGTATCGGGAGTTCAATCAAGTATTTGAGAAAAAAAAGATCTGACCCAAGAGTGGGTGAAACAAAAGATGGAGAGGTATATGCATTACTTCTCTTGTTGGCAACTGGTTTTGAAATGTAACTTCATGTTCATATAATATGTAGGGATGAATGGTTTCTTTTATTTCTTTGAAGAAAGAGATTTTTCATTGAACTTTAGGGATATTTGACTATCAGTAAACGTGAGTTTATGAACCCTAAGAAAGGTTGGGTTTTGTATAACCTATGTTTGTATTGTGGAAAGGAATCGGTTTTTGTAAACTTGAGTTTGTGTAACTTGTAATTAGTTGGTGAGTTTAAATTATTTATTTATTTATTTCTTAAATACGATATGTAATATAAAATATAGATTCATGTAATATAACTTTATACCGTTCGTAAGAACAGCAAACTTATAGTTTGGAATAAACAAGTCAACATCTCAAACACCTAGTCTTTTGATCTCATGTTACACATTTAATCCACGAACCAACTTTTAGTGCTTGAAAAATCGTGTAGTGTTAAGCAACTTTGATGTAGAGGGGCACTAGCTGATTGGTTTGTTGTAAAGAGGCAAGTGGCAGCATTGAGATCATTTTTATGAGAGAACATTCAAGAAAGGCATGAAAGAGAGGAAAGTTACCTTGCATTTTTGGAGGAAAAGTTGCCTAAATGGGCAGTTTATTTCTTATAGGGACTGTTTGCATTTTATATTCCTTACAAGCATGCACTACTTATCATGAAAACATTGAATGGAATACCCAGATTTTTTTCCCTTGTGCGTGTGTGCATTGTCACGATAAAAACACAGTAATATTTTTATCTCATTATTGTGAGAAATTCTCCCTATCCTTGATTAAGTAAACTTCTGGTTGTGGAGTAAAGTTATGAACTGTGGATTTATATGATGTAAGCATCAACTGATGATCTTAGTTGATTGAATGATTTCGCTCTTGACTGAAGCATGACTTTTTCTTTCATCTATTAAAAGGTAATTTAGCTTTATATAAGCAAATGATTCTTTGGTAAAGAGACAATCAAGTTAGTATTGTTTTTCTTTAAACATAGTGTTTGATAAGAATGGCCTTTTGCAGTTGCTTGTTGCTGGGGGTGCAATGTATGTTGAAGTATTCAACAAAGGCCTCATTCCACTAGCATATAGCATCAAGAAGAAAAACAAAGCTGGTGAAACCAACACTTACTTGGATGGCATCAATCTCCTCTTCACCTACTTCACAAAACCCGAATCAATGGCAGTTCTTGAGGCAACGCTCCAAGCAGACGACGATGTTGTTCGATCAATGAGTTTCAAGGTAAGGAAACGAAAATACTAA

mRNA sequence

ATGCAGCGCCTACAGGCTACAACACAGTTGCTTGTTGCTGGGGGTGCAATGTATGTTGAAGTATTCAACAAAGGCCTCATTCCACTAGCATATAGCATCAAGAAGAAAAACAAAGCTGGTGAAACCAACACTTACTTGGATGGCATCAATCTCCTCTTCACCTACTTCACAAAACCCGAATCAATGGCAGTTCTTGAGGCAACGCTCCAAGCAGACGACGATGTTGTTCGATCAATGAGTTTCAAGGTAAGGAAACGAAAATACTAA

Coding sequence (CDS)

ATGCAGCGCCTACAGGCTACAACACAGTTGCTTGTTGCTGGGGGTGCAATGTATGTTGAAGTATTCAACAAAGGCCTCATTCCACTAGCATATAGCATCAAGAAGAAAAACAAAGCTGGTGAAACCAACACTTACTTGGATGGCATCAATCTCCTCTTCACCTACTTCACAAAACCCGAATCAATGGCAGTTCTTGAGGCAACGCTCCAAGCAGACGACGATGTTGTTCGATCAATGAGTTTCAAGGTAAGGAAACGAAAATACTAA

Protein sequence

MQRLQATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEATLQADDDVVRSMSFKVRKRKY
Homology
[Close]
BLAST of PI0018547 vs. ExPASy Swiss-Prot
Match: P82403 (30S ribosomal protein S6 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPS6 PE=1 SV=3)

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-31
Identity = 66/84 (78.57%), Postives = 74/84 (88.10%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGGAMYVEVFN+G+IPLAYSIK+KNKAGETN YLDGI LLFTYFTKPES++ 
Sbjct: 128 QKYEELLVAGGAMYVEVFNRGVIPLAYSIKRKNKAGETNNYLDGIYLLFTYFTKPESISP 187

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LEA L  DDDV+RS SFK+RKRKY
Sbjct: 188 LEAALVTDDDVIRSSSFKIRKRKY 211

[Close]
BLAST of PI0018547 vs. ExPASy Swiss-Prot
Match: Q8VY91 (30S ribosomal protein S6 alpha, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPS6 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 6.2e-31
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGG MYVEVFN+G+IPLAYSI+KKNKAGETNTYLDGI LLFTYFTKPES+  
Sbjct: 123 QKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVP 182

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LE  L ADDD++RS SFK++KRKY
Sbjct: 183 LETVLTADDDIIRSSSFKIKKRKY 206

[Close]
BLAST of PI0018547 vs. ExPASy TrEMBL
Match: A0A5D3C6V7 (30S ribosomal protein S6 alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001770 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.6e-35
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 9   QLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 68
           +LLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT
Sbjct: 131 ELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 190

Query: 69  LQADDDVVRSMSFKVRKRKY 89
           LQADDDVVRSMSFKVRKRK+
Sbjct: 191 LQADDDVVRSMSFKVRKRKF 210

[Close]
BLAST of PI0018547 vs. ExPASy TrEMBL
Match: A0A0A0KK24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148810 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.6e-35
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 9   QLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 68
           +LLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT
Sbjct: 131 ELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 190

Query: 69  LQADDDVVRSMSFKVRKRKY 89
           LQADDDVVRSMSFKVRKRK+
Sbjct: 191 LQADDDVVRSMSFKVRKRKF 210

[Close]
BLAST of PI0018547 vs. ExPASy TrEMBL
Match: A0A1S4DT54 (30S ribosomal protein S6 alpha, chloroplastic OS=Cucumis melo OX=3656 GN=LOC107990347 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.6e-35
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 9   QLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 68
           +LLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT
Sbjct: 131 ELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 190

Query: 69  LQADDDVVRSMSFKVRKRKY 89
           LQADDDVVRSMSFKVRKRK+
Sbjct: 191 LQADDDVVRSMSFKVRKRKF 210

[Close]
BLAST of PI0018547 vs. ExPASy TrEMBL
Match: A0A6J1K3V4 (30S ribosomal protein S6 alpha, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111491447 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.8e-33
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGG MYVEVF+KG++PLAYSIKKKNKAGETNTYLDGI+LLFTYFTKPESM +
Sbjct: 127 QKYEELLVAGGGMYVEVFHKGVVPLAYSIKKKNKAGETNTYLDGISLLFTYFTKPESMGI 186

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LEATLQADDDVVRSMSFKVRKRKY
Sbjct: 187 LEATLQADDDVVRSMSFKVRKRKY 210

[Close]
BLAST of PI0018547 vs. ExPASy TrEMBL
Match: A0A6J1HZP1 (30S ribosomal protein S6 alpha, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111469094 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.5e-32
Identity = 72/84 (85.71%), Postives = 77/84 (91.67%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGG MYVEVFN+GL+PLAYSIKKKNKAGETNTY+DGINLLFTYFTKPESM V
Sbjct: 114 QKYEELLVAGGGMYVEVFNRGLVPLAYSIKKKNKAGETNTYMDGINLLFTYFTKPESMRV 173

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LEA LQADDDV+RSMSFKVR RKY
Sbjct: 174 LEAVLQADDDVIRSMSFKVRNRKY 197

[Close]
BLAST of PI0018547 vs. NCBI nr
Match: XP_016898885.1 (PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Cucumis melo] >KAA0042673.1 30S ribosomal protein S6 alpha [Cucumis melo var. makuwa] >TYK06076.1 30S ribosomal protein S6 alpha [Cucumis melo var. makuwa])

HSP 1 Score: 156.4 bits (394), Expect = 1.2e-34
Identity = 78/80 (97.50%), Postives = 80/80 (100.00%), Query Frame = 0 

Query: 9   QLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 68
           +LLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT
Sbjct: 131 ELLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 190

Query: 69  LQADDDVVRSMSFKVRKRKY 89
           LQADDDVVRSMSFKVRKRK+
Sbjct: 191 LQADDDVVRSMSFKVRKRKF 210

[Close]
BLAST of PI0018547 vs. NCBI nr
Match: XP_038906485.1 (30S ribosomal protein S6 alpha, chloroplastic [Benincasa hispida])

HSP 1 Score: 152.1 bits (383), Expect = 2.2e-33
Identity = 75/80 (93.75%), Postives = 79/80 (98.75%), Query Frame = 0 

Query: 9   QLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAVLEAT 68
           +LLVAGGAMYVEVF+KGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESM +LEAT
Sbjct: 131 ELLVAGGAMYVEVFHKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMGILEAT 190

Query: 69  LQADDDVVRSMSFKVRKRKY 89
           LQADD+VVRSMSFKVRKRKY
Sbjct: 191 LQADDNVVRSMSFKVRKRKY 210

[Close]
BLAST of PI0018547 vs. NCBI nr
Match: XP_022996136.1 (30S ribosomal protein S6 alpha, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 149.4 bits (376), Expect = 1.4e-32
Identity = 73/84 (86.90%), Postives = 79/84 (94.05%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGG MYVEVF+KG++PLAYSIKKKNKAGETNTYLDGI+LLFTYFTKPESM +
Sbjct: 127 QKYEELLVAGGGMYVEVFHKGVVPLAYSIKKKNKAGETNTYLDGISLLFTYFTKPESMGI 186

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LEATLQADDDVVRSMSFKVRKRKY
Sbjct: 187 LEATLQADDDVVRSMSFKVRKRKY 210

[Close]
BLAST of PI0018547 vs. NCBI nr
Match: XP_022928898.1 (30S ribosomal protein S6 alpha, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 148.3 bits (373), Expect = 3.1e-32
Identity = 72/84 (85.71%), Postives = 77/84 (91.67%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGG MYVEVFN+GL+PLAYSIKKKNKAGETNTY+DGINLLFTYFTKPESM V
Sbjct: 150 QKYEELLVAGGGMYVEVFNRGLVPLAYSIKKKNKAGETNTYMDGINLLFTYFTKPESMRV 209

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LEA LQADDDV+RSMSFKVR RKY
Sbjct: 210 LEAALQADDDVIRSMSFKVRNRKY 233

[Close]
BLAST of PI0018547 vs. NCBI nr
Match: KAG7017023.1 (30S ribosomal protein S6 alpha, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 148.3 bits (373), Expect = 3.1e-32
Identity = 72/84 (85.71%), Postives = 77/84 (91.67%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGG MYVEVFN+GL+PLAYSIKKKNKAGETNTY+DGINLLFTYFTKPESM V
Sbjct: 114 QKYEELLVAGGGMYVEVFNRGLVPLAYSIKKKNKAGETNTYMDGINLLFTYFTKPESMRV 173

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LEA LQADDDV+RSMSFKVR RKY
Sbjct: 174 LEAALQADDDVIRSMSFKVRNRKY 197

[Close]
BLAST of PI0018547 vs. TAIR 10
Match: AT1G64510.1 (Translation elongation factor EF1B/ribosomal protein S6 family protein )

HSP 1 Score: 134.4 bits (337), Expect = 4.4e-32
Identity = 64/84 (76.19%), Postives = 73/84 (86.90%), Query Frame = 0 

Query: 5   QATTQLLVAGGAMYVEVFNKGLIPLAYSIKKKNKAGETNTYLDGINLLFTYFTKPESMAV 64
           Q   +LLVAGG MYVEVFN+G+IPLAYSI+KKNKAGETNTYLDGI LLFTYFTKPES+  
Sbjct: 123 QKYEELLVAGGGMYVEVFNRGVIPLAYSIRKKNKAGETNTYLDGIYLLFTYFTKPESIVP 182

Query: 65  LEATLQADDDVVRSMSFKVRKRKY 89
           LE  L ADDD++RS SFK++KRKY
Sbjct: 183 LETVLTADDDIIRSSSFKIKKRKY 206

The following BLAST results are available for this feature:
BLAST of PI0018547 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P824032.8e-3178.5730S ribosomal protein S6 alpha, chloroplastic OS=Spinacia oleracea OX=3562 GN=RP... [more]
Q8VY916.2e-3176.1930S ribosomal protein S6 alpha, chloroplastic OS=Arabidopsis thaliana OX=3702 GN... [more]
BLAST of PI0018547 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C6V75.6e-3597.5030S ribosomal protein S6 alpha OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s... [more]
A0A0A0KK245.6e-3597.50Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G148810 PE=3 SV=1[more]
A0A1S4DT545.6e-3597.5030S ribosomal protein S6 alpha, chloroplastic OS=Cucumis melo OX=3656 GN=LOC1079... [more]
A0A6J1K3V46.8e-3386.9030S ribosomal protein S6 alpha, chloroplastic-like OS=Cucurbita maxima OX=3661 G... [more]
A0A6J1HZP11.5e-3285.7130S ribosomal protein S6 alpha, chloroplastic-like OS=Cucurbita maxima OX=3661 G... [more]
BLAST of PI0018547 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_016898885.11.2e-3497.50PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Cucumis melo] >KAA0042... [more]
XP_038906485.12.2e-3393.7530S ribosomal protein S6 alpha, chloroplastic [Benincasa hispida][more]
XP_022996136.11.4e-3286.9030S ribosomal protein S6 alpha, chloroplastic-like [Cucurbita maxima][more]
XP_022928898.13.1e-3285.7130S ribosomal protein S6 alpha, chloroplastic-like [Cucurbita moschata][more]
KAG7017023.13.1e-3285.7130S ribosomal protein S6 alpha, chloroplastic [Cucurbita argyrosperma subsp. arg... [more]
BLAST of PI0018547 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G64510.14.4e-3276.19Translation elongation factor EF1B/ribosomal protein S6 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000529Ribosomal protein S6PFAMPF01250Ribosomal_S6coord: 5..82
e-value: 4.2E-9
score: 36.6
IPR000529Ribosomal protein S6PANTHERPTHR21011MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6coord: 8..88
IPR014717Translation elongation factor EF1B/ribosomal protein S6GENE3D3.30.70.60coord: 1..88
e-value: 6.3E-11
score: 44.0
NoneNo IPR availablePANTHERPTHR21011:SF1530S RIBOSOMAL PROTEIN S6 ALPHA, CHLOROPLASTICcoord: 8..88
IPR035980Ribosomal protein S6 superfamilySUPERFAMILY54995Ribosomal protein S6coord: 5..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018547.1PI0018547.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome