PI0018528 (gene) Melon (PI 482460) v1

Overview
NamePI0018528
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRNA-binding protein 24 isoform X1
Locationchr09: 20887660 .. 20892547 (-)
RNA-Seq ExpressionPI0018528
SyntenyPI0018528
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTCTTTTTTCTTTTTTCTTTCTTTTTTTCTTAATTTTTTTCCAATTAAATACATAAATAAATCATTATTATTATTATTTATTTTTAATATGTAACTTTTGCTTTCCCTTCCCTCCTTCCCCTCTCATAGTCTCCCATTTCACTTTCTCTCTTTTGTTTTCATCTCTAACCTAATTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCATCTCTTCTCATCCATTCCATCTCTCTCTTCATCTAACCCTAATTCCCCAACACAAAATTTAGAACATATTGTGAAAATTAAGAATCTTTTGATCTTCCCAAAGATTTGTGTTTTTGTTTTGTTTTGTTTTTTTTTGTTAAGATCATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTATACCAAAGTTTTTGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAAGCTGTTGTTATTACCGACAAAGCCACTGGCCGATCCAAAGGCTATGGATTTGTAATAATAATAAAACTCTCTTCCTTCCCCCTTCCCTTTCTCTTTATATATCTTTCTTTCCTTCTCCTGACCATGGAGTTTTTTCTTTTACAGGTCACGTTTCGTGAACCCGATGCCGCTATGAGAGCTTGTGTAGATGCTTCTCCAGTCATCGATGGTCGGAGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCTACCCCTAAACACGGTATATTCACATTTAGATCTATTTATTATTTCATTTCACAACTATTTTATTTTTAAAATCACTTCCAAACATATTCTTCTCTTCTTACTGTTTGTTTACAATAGTACATAATGAAACATAAGAGTTAAATGGTTATCAAACGAAGTGTAAATCCTATATGTGTTATTTAATTAAGTGGTTGGTTGATTTGGGTTTGTTTTTGAAATTGATGTATAAAGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACAACAACTTTCCCTCATTATGCTATCCAGCAAGGGATCCCTTACAATCTCTATGGGTAATTTCTTTTTTTCTTTTTTTCTTTTTATTTCTCTAATAATTATCTTTTATATATTTATTTATTTATTTTTCTCTCTCTACAACGTGACTTGCCAACTCATTTCTTCACTTTAATTACTTTATGACTAACAATAAAGTCTTTCTTTTTTCCCTTCATAATCACTCTAAATGAAAATTCATATTGTTTCCTCTTTAAGTTACTACAACATTTATTTTCAATTTGTTTTAATGTATATATCAATATGCATGGCATTGCATGTATTTTTTGTAATTATTAATTGGGTATTATAGTTAAAAACTTTATTGTTAATTAATTAATTTATAAATTTTTTGTTTTTTTAGGTACTCTTCTTATTCGCCTGACTACACTTACCCTACGGTTTGTACAAATTTTTATCTTTTTCTATATTTTTATGGTTAAATTCATAAATAAAATAGAATAATTATAGAGAAAATAAATATATAAATAAATAAATATTGAAAAAGATGAATAAGGGTATAATTGGAAATGAGAATATGTGTAGATAATTGTGTGGTCAAACTGTTGAAAAGTGAAAGTTAAGAGAACCATTTCTCATGTTCTTTCTCTTGTCGTTTTATCCGACAGTTTTTGTTTCTACATTTAATATTTTGTAACAGTATATCACTTTCTTACTGTTCTTTTTCTTTCTTTTTTTTCTTTAAATAAAAATTCTTTTATAAGTTATTGTTACACATTCTTTCATGCACTTAATCATGAAACTGCCTCCACCATCCCGACCACTCTACATTGAAAAAACATACTTACAATCCATCTCCACTTCCGCTTCTCATATTTTCAATCACGAGTTCTCACGTAACAGGCTTTTCTTTAAAAAAATTTTTTTCTTTTTTCTTTGTTATGGTAAGAAAATGCATTGAAAAAGATCTTATCGTCAAGGTTTGAAATTTCGATGTTGACGAAAATTTCATCAAAATTTTCTAAAAAGTTATTTATTTTCCAACAAGTTTACATATGTTTAGTGTTATTCAGTGGAAATATCAACATAAATTTAATTGCGTAAGAATATAGATTATCAATTATCAAGGACAAGGATTTAAAAGACTGTAAATGAAAATGGTTGGTGTTTATGATTATTTATGATTAAAGTTTTGTATTAAATTTCCAGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGCGGCATATTGAGCGGAGCGGCAGCGGCGGCAGCAGCATTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGTGGTGGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTATCCTCACCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCCGCAACAACTTTCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGTTTGTTTGTTGCTAACTCCGTTTCATAACTACTTCATTTTTATATATAATGTTGTTTTATTATGCTTATATCGTTGTTAATATATGAACATAAATTGTTAATAATTCTTAAAAATGAGAGTATAAAGAAAGATAATATATTTATATAATTTGTGTTTAAACTGTTTTATTTTCCAACTCAGAAAATCTTAAAACAAACTGATAAGTATACCGCTGATAAAAGCACTTTTAAAACACTTTTTTGTTAGGCTAATAGTATTAACACAATTTTTAAAACAAATATTAATGGTTTGTGTATACTAGCCCGTAAGAATATTTTTTAAGGTTTTTTTTTAGCTTAGGTGTATTTTTTAAAATTTTGAAAGTTAAAACTTTCATTAACGTTCAAAGGTATTTTTTGTATAAAGTTTAGGAACATTTTTATATATTTAGCCCTTTATTTAAGTTGGGGAGAGTGAAAGAAAGACATACTAACATATCTTTGACAGTGTTTTTTGCTATTCCACAGGCGTGACCATGGCTCTTCCTGCACCAATTCCGCATCGTTAGAGACAACATAATCTCATCGTCGACCTCGAATTCCCTCCAATATTTGTCTTCTTCAATCAAACCAACTCAACCTTCGCCCTAACCATGGTTCAATCTCTTTCTCTCTTCACTCTAACTCACTCATGCCTTTATAGGCCAATCCTAGCCCCCCATAGGGGCTAACCTCAAAACCAACCATACCAATTCTCACCCCCTCCAAAATTGGAGCAAAATCATGCATTTCCATTATTATTCATATTAATTAGGGTTTAGTGAAGAAAAAAAAGTGAAAATGGTTCCTTTATCAAGAGAACCAAAACCCACTTTGTGAAAAATCCCAATTTAGGCCATCAAGGAATTGGCCTCATATTGGTAATATTTGCACATAGCTTTGTTTTTTTAATCTTCAAAGTCTAGGAAAGGCTTTAAGGATTTAACCAAAAAAAAAAACATTTTTCCAAAAAAAAAAAATTATTGTATATTTTATCCTAAACACCACACCCCTCTTTTTCTCTTCCATCACTTTGAAAAAATTGGAATTGAAAAAAGGGTAATATTTTTCTCATCATCATTTTGTAATTAATTTTTAATTAGGAAGTAAATTAGATGGAAAAATTTTCAAGAAATTGGTGAGGCTATGGCTGCCCCCACCTCTTTCTTAAAATTTGTAGATTTTTGTTTTTCAAAATTAATCACCATCTTTCAAATATTTTCCTCTCTAGGTCTAGTGGATAATTTTTCTTTTTTTCTTTTTTTTTTACAAATTTAATTTAGTAATAGTTGGTCTAATCAACCAACATTATCTTTGACATATTATTTCCCTTGGGTTAGGGGAATAATACCTTAATCTCTTTGATTAATTAACTCTTATTAAGCACATTAGTTAATTTTTCTTGTGTAATTAAAATTTTCATCAACGATCATGGTTGAACTTATGGGAGTTTACAACCATGTTTATTTTTGGTAAACCAAAGCACAAATATTGCATTTGGTTTAACTTTTTCTTTTTTCTTTTTTCTTTTTTTGGTGCATTTAGGTTATTTCATAATTAGAAATTATAATTAGGATAATTAGGTTTAAGCATGTCATGAAATTTTGAGATATTCCTTAATGGATATTGGAAATCTCAAAATAAAGCATTTTGCATATTAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTTTTCTTTTCCTTTCAAACTAACCCAACCAACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTCTATCTCTTTTCTTCACCTATTCCCATTTTACCCTTTTTTTCATTTCATCTTCAATCATCCTTTCATTTTCATGTGCTTGTGTGTTCAAGCTTAGCACTTTCTTCTTTCATGGAGTTGGTGGAACTTGGAAACACTTTTTTTAATTAATTATGTTTGTAAAAGAAGAGCCTTTTTTAAAAAAAATGTCTTTTTTTTTTATGGTTTGTAATGTAATTAGATGGTTAATTACTACCCGTTTTTCTTTTTTATGTTAAGGACTTTTCTCTCTACTAAGATCATTAAGTTCTTCATTAGTTGCATACTCCTAATTTGCAGCTGCTTGAAGAATAACCTATGTACCTCAATATTAATTGCTTCTTTAATTTCTTTCTCCTCTCTTTATTCTCTTTCACCTTTTTTTTTTATTGAACCTATGATTTAGTCCTTTGAACTTGTTTAGAATGACTTTTACAACATTTATAAGCATTTAAAATGTTGTTTTAGTTATTTTAAATGTGGG

mRNA sequence

TTTTCTTTTTTCTTTTTTCTTTCTTTTTTTCTTAATTTTTTTCCAATTAAATACATAAATAAATCATTATTATTATTATTTATTTTTAATATGTAACTTTTGCTTTCCCTTCCCTCCTTCCCCTCTCATAGTCTCCCATTTCACTTTCTCTCTTTTGTTTTCATCTCTAACCTAATTCTCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTTCATCTCTTCTCATCCATTCCATCTCTCTCTTCATCTAACCCTAATTCCCCAACACAAAATTTAGAACATATTGTGAAAATTAAGAATCTTTTGATCTTCCCAAAGATTTGTGTTTTTGTTTTGTTTTGTTTTTTTTTGTTAAGATCATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTATACCAAAGTTTTTGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAAGCTGTTGTTATTACCGACAAAGCCACTGGCCGATCCAAAGGCTATGGATTTGTCACGTTTCGTGAACCCGATGCCGCTATGAGAGCTTGTGTAGATGCTTCTCCAGTCATCGATGGTCGGAGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCTACCCCTAAACACGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACAACAACTTTCCCTCATTATGCTATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCTTATTCGCCTGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGCGGCATATTGAGCGGAGCGGCAGCGGCGGCAGCAGCATTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGTGGTGGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTATCCTCACCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCCGCAACAACTTTCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATTCCGCATCGTTAGAGACAACATAATCTCATCGTCGACCTCGAATTCCCTCCAATATTTGTCTTCTTCAATCAAACCAACTCAACCTTCGCCCTAACCATGGTTCAATCTCTTTCTCTCTTCACTCTAACTCACTCATGCCTTTATAGGCCAATCCTAGCCCCCCATAGGGGCTAACCTCAAAACCAACCATACCAATTCTCACCCCCTCCAAAATTGGAGCAAAATCATGCATTTCCATTATTATTCATATTAATTAGGGTTTAGTGAAGAAAAAAAAGTGAAAATGGTTCCTTTATCAAGAGAACCAAAACCCACTTTGTGAAAAATCCCAATTTAGGCCATCAAGGAATTGGCCTCATATTGGTAATATTTGCACATAGCTTTGTTTTTTTAATCTTCAAAGTCTAGGAAAGGCTTTAAGGATTTAACCAAAAAAAAAAACATTTTTCCAAAAAAAAAAAATTATTGTATATTTTATCCTAAACACCACACCCCTCTTTTTCTCTTCCATCACTTTGAAAAAATTGGAATTGAAAAAAGGGTAATATTTTTCTCATCATCATTTTGTAATTAATTTTTAATTAGGAAGTAAATTAGATGGAAAAATTTTCAAGAAATTGGTGAGGCTATGGCTGCCCCCACCTCTTTCTTAAAATTTGTAGATTTTTGTTTTTCAAAATTAATCACCATCTTTCAAATATTTTCCTCTCTAGGTCTAGTGGATAATTTTTCTTTTTTTCTTTTTTTTTTACAAATTTAATTTAGTAATAGTTGGTCTAATCAACCAACATTATCTTTGACATATTATTTCCCTTGGGTTAGGGGAATAATACCTTAATCTCTTTGATTAATTAACTCTTATTAAGCACATTAGTTAATTTTTCTTGTGTAATTAAAATTTTCATCAACGATCATGGTTGAACTTATGGGAGTTTACAACCATGTTTATTTTTGGTAAACCAAAGCACAAATATTGCATTTGGTTTAACTTTTTCTTTTTTCTTTTTTCTTTTTTTGGTGCATTTAGGTTATTTCATAATTAGAAATTATAATTAGGATAATTAGGTTTAAGCATGTCATGAAATTTTGAGATATTCCTTAATGGATATTGGAAATCTCAAAATAAAGCATTTTGCATATTAGCCCTTGGGAGATATTTGGGTTCCCTTTGGCTTTTTCTTTTCCTTTCAAACTAACCCAACCAACCAACCATGGTTAGGACTTAGGTCAACTTCATTTCTCTCTATCTCTTTTCTTCACCTATTCCCATTTTACCCTTTTTTTCATTTCATCTTCAATCATCCTTTCATTTTCATGTGCTTGTGTGTTCAAGCTTAGCACTTTCTTCTTTCATGGAGTTGGTGGAACTTGGAAACACTTTTTTTAATTAATTATGTTTGTAAAAGAAGAGCCTTTTTTAAAAAAAATGTCTTTTTTTTTTATGGTTTGTAATGTAATTAGATGGTTAATTACTACCCGTTTTTCTTTTTTATGTTAAGGACTTTTCTCTCTACTAAGATCATTAAGTTCTTCATTAGTTGCATACTCCTAATTTGCAGCTGCTTGAAGAATAACCTATGTACCTCAATATTAATTGCTTCTTTAATTTCTTTCTCCTCTCTTTATTCTCTTTCACCTTTTTTTTTTATTGAACCTATGATTTAGTCCTTTGAACTTGTTTAGAATGACTTTTACAACATTTATAAGCATTTAAAATGTTGTTTTAGTTATTTTAAATGTGGG

Coding sequence (CDS)

ATGACTCCATCTAACTTAGCAAGTCAATTTGGAGATACCACTTATACCAAAGTTTTTGTGGGTGGTTTGGCTTGGGAAACTCACAAAGACACCATGAAGAAATACTTTGAACAATTTGGTGATATCTTGGAAGCTGTTGTTATTACCGACAAAGCCACTGGCCGATCCAAAGGCTATGGATTTGTCACGTTTCGTGAACCCGATGCCGCTATGAGAGCTTGTGTAGATGCTTCTCCAGTCATCGATGGTCGGAGAGCCAATTGCAATCTTGCTTCTCTTGGTGTTCAAAGATCCAAACCCTCTACCCCTAAACACGAGAAAAAGAAATGGGAATTGACAGGAGGAGGAGGAGGAAGAAATAATTTTAGGGTATTAAGCTCAAATTTCCAGAGTGGATTTGGAGGGAATGTTGGATCAGCTTTTCATTCACCAACAACAACAACTTTCCCTCATTATGCTATCCAGCAAGGGATCCCTTACAATCTCTATGGGTACTCTTCTTATTCGCCTGACTACACTTACCCTACGAGCTATTACAATGTGTACGGCGGGGCAACTGCACAGTACCCCATGTACGGGACGGGTCCGGGCGGCATATTGAGCGGAGCGGCAGCGGCGGCAGCAGCATTCTACCCGTATTTCCAATTCGGGGAAGGAAGCGGTGGTGGCGGTTCGGGGCAGCAAGGGTATGGGGTTCAGTATCCTCACCATCTGTTTCAATACTCGGCCGCGATTAATTCAACTGCCGCAACAACTTTCCCTCAGCATTATGCTGCTCCTCCTATGTCTCTTCCTCCCACGCCCCCCACTTTGCCATCAGGCGTGACCATGGCTCTTCCTGCACCAATTCCGCATCGTTAG

Protein sequence

MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Homology
[Close]
BLAST of PI0018528 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27
Identity = 101/271 (37.27%), Postives = 134/271 (49.45%), Query Frame = 0 

Query: 2   TPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGF 61
           T +N+   FGDT  TKVFVGGLAW+THK+ M  +F ++GDILEAV+I+DK T RSKGYGF
Sbjct: 3   TSNNVNGCFGDTKLTKVFVGGLAWDTHKEAMYDHFIKYGDILEAVIISDKLTRRSKGYGF 62

Query: 62  VTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNN 121
           VTF++  AA RAC D++P+I+GRRANCNLASLG +  K  T    ++        G +N 
Sbjct: 63  VTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQ--------GPKNG 122

Query: 122 FRVLSSNFQSGFGGNVGSAFHSPTTTTFPH-YAIQQGIPYNLYGYSSYSPDYTYPTSYYN 181
            R    +      GN    ++    T   H     Q +P+  YGY S    Y  P   +N
Sbjct: 123 NRATPPHV-----GNHSQWYYPSGFTNQQHQQQNHQAVPF--YGYPS---AYVAPNMTFN 182

Query: 182 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEG--SGGGGSGQQGYGVQYPHHL 241
              G      M G          +     +Y +  +G G    G  S    +   YP+H 
Sbjct: 183 QKVGYVGGTYMNGYYAQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQ 242

Query: 242 FQYSAAINSTAATTFPQHYAAPPMSLPPTPP 270
            Q         A  FPQ   + P+S   TPP
Sbjct: 243 SQ---------AIGFPQPSFSKPLSF-STPP 245

[Close]
BLAST of PI0018528 vs. ExPASy Swiss-Prot
Match: Q9BX46 (RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.4e-25
Identity = 92/245 (37.55%), Postives = 121/245 (49.39%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FG+I EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGEIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      R++   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RIMQPGFAF 126

Query: 132 G----FGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATA 191
           G        +   F  P    +P   +Q G+   +  +   +      T Y +  G A A
Sbjct: 127 GVQQLHPALIQRPFGIPAHYVYPQAFVQPGV---VIPHVQPTAAAASTTPYIDYTGAAYA 186

Query: 192 QYPMYGTGPGGILSGAAAAAAAF--YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAI 251
           QY           + AAAAAAA+  YPY      +G   +G  GY VQ P      +AA 
Sbjct: 187 QY--------SAAAAAAAAAAAYDQYPYAASPAAAGYVTAGGYGYAVQQP-----ITAAA 210

[Close]
BLAST of PI0018528 vs. ExPASy Swiss-Prot
Match: Q6P8A7 (RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 7.4e-25
Identity = 94/252 (37.30%), Postives = 121/252 (48.02%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      R++   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RIMQPGFAF 126

Query: 132 G----FGGNVGSAFHSPTTTTFPHYAIQQG--IPY-NLYGYSSYSPDYTYPTSYYNVYGG 191
           G        +   F  P    +PH  +Q G  IP+      +S SP   Y ++ Y     
Sbjct: 127 GVQQIHPALIQRPFGIPAHYVYPHAFVQPGVVIPHVQQAAAASTSPYIDYTSAAY----- 186

Query: 192 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAA 251
             AQY           S AAAAAAA+  Y      +  G     GYG   P  L   +  
Sbjct: 187 --AQY-----------SAAAAAAAAYDQYPYAASPATTGYVTTAGYGYAVPQPLTAAAPG 215

Query: 252 INSTAATTFPQH 257
             + AA  F Q+
Sbjct: 247 TAAAAAAAFGQY 215

[Close]
BLAST of PI0018528 vs. ExPASy Swiss-Prot
Match: D3Z4I3 (RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-24
Identity = 92/245 (37.55%), Postives = 120/245 (48.98%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDASLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      R++   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RIMQPGFAF 126

Query: 132 G----FGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYNVYGGATA 191
           G        +   F  P    +P   +Q G+   +  +   +      T Y +  G A A
Sbjct: 127 GVQQLHPALIQRPFGIPAHYVYPQAFVQPGV---VIPHVQPTAAAASTTPYIDYTGAAYA 186

Query: 192 QYPMYGTGPGGILSGAAAAAAAF--YPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAI 251
           QY           + AAAAAAA+  YPY      +G   +G   Y VQ P      +AA 
Sbjct: 187 QY--------SAAAAAAAAAAAYDQYPYAASPAAAGYVTTGGYSYAVQQP-----ITAAA 210

[Close]
BLAST of PI0018528 vs. ExPASy Swiss-Prot
Match: Q9I8B3 (RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.2e-24
Identity = 93/252 (36.90%), Postives = 120/252 (47.62%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTTYTK+FVGGL + T   +++KYFE FGDI EAVVITD+ TG+S+GYGFVT  +  AA 
Sbjct: 7   DTTYTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAE 66

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           RAC D +P+IDGR+AN NLA LG   +KP                      R++   F  
Sbjct: 67  RACKDPNPIIDGRKANVNLAYLG---AKP----------------------RIMQPGFAF 126

Query: 132 G----FGGNVGSAFHSPTTTTFPHYAIQQG--IPY-NLYGYSSYSPDYTYPTSYYNVYGG 191
           G        V   +  P    +P   +QQG  IP+      +S SP   Y ++ Y     
Sbjct: 127 GVQQIHPALVQRPYGIPAHYVYPQAYVQQGLVIPHVQQTAAASTSPYIDYTSAAY----- 186

Query: 192 ATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAA 251
             AQY             AAAAAAA+  Y      +  G     GYG   P  L   +  
Sbjct: 187 --AQY-------------AAAAAAAYDQYPYAASPATTGYVTAAGYGYAVPQPLTAATPG 213

Query: 252 INSTAATTFPQH 257
             + AA  F Q+
Sbjct: 247 TAAAAAAAFAQY 213

[Close]
BLAST of PI0018528 vs. ExPASy TrEMBL
Match: A0A1S4E2E1 (RNA-binding protein 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 572.4 bits (1474), Expect = 1.1e-159
Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 287
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285

[Close]
BLAST of PI0018528 vs. ExPASy TrEMBL
Match: A0A1S4E2E8 (RNA-binding protein 24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 547.7 bits (1410), Expect = 2.8e-152
Identity = 277/286 (96.85%), Postives = 277/286 (96.85%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 287
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 277

[Close]
BLAST of PI0018528 vs. ExPASy TrEMBL
Match: A0A0A0KUN6 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647270 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.7e-152
Identity = 275/280 (98.21%), Postives = 276/280 (98.57%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 281
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS-VFFAIP 278

[Close]
BLAST of PI0018528 vs. ExPASy TrEMBL
Match: A0A1S4E2E6 (RNA-binding protein 24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 SV=1)

HSP 1 Score: 547.4 bits (1409), Expect = 3.7e-152
Identity = 275/280 (98.21%), Postives = 276/280 (98.57%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 281
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS-VFFAIP 278

[Close]
BLAST of PI0018528 vs. ExPASy TrEMBL
Match: A0A5A7T7A3 (RNA-binding protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001520 PE=4 SV=1)

HSP 1 Score: 537.0 bits (1382), Expect = 4.9e-149
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYG             YYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYG-------------YYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 287
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 272

[Close]
BLAST of PI0018528 vs. NCBI nr
Match: XP_011656046.1 (RNA-binding protein 24 isoform X1 [Cucumis sativus] >XP_016902396.1 PREDICTED: RNA-binding protein 24 isoform X1 [Cucumis melo])

HSP 1 Score: 572.4 bits (1474), Expect = 2.2e-159
Identity = 285/286 (99.65%), Postives = 285/286 (99.65%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 287
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 285

[Close]
BLAST of PI0018528 vs. NCBI nr
Match: XP_016902398.1 (PREDICTED: RNA-binding protein 24 isoform X3 [Cucumis melo] >XP_031741591.1 RNA-binding protein 24 isoform X3 [Cucumis sativus])

HSP 1 Score: 547.7 bits (1410), Expect = 5.8e-152
Identity = 277/286 (96.85%), Postives = 277/286 (96.85%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH        GGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH--------GGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 287
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 277

[Close]
BLAST of PI0018528 vs. NCBI nr
Match: XP_016902397.1 (PREDICTED: RNA-binding protein 24 isoform X2 [Cucumis melo] >XP_031741590.1 RNA-binding protein 24 isoform X2 [Cucumis sativus] >KGN52604.1 hypothetical protein Csa_009109 [Cucumis sativus])

HSP 1 Score: 547.4 bits (1409), Expect = 7.5e-152
Identity = 275/280 (98.21%), Postives = 276/280 (98.57%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 281
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS V  A+P
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPS-VFFAIP 278

[Close]
BLAST of PI0018528 vs. NCBI nr
Match: XP_038890037.1 (RNA-binding protein 24 isoform X1 [Benincasa hispida])

HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151
Identity = 275/291 (94.50%), Postives = 278/291 (95.53%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGG--- 120
           FVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGG   
Sbjct: 61  FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGGG 120

Query: 121 --GRNNFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYP 180
             G  NFRVLSSNFQ+GFGGNVGSAFHSP  TTFPHYAI QGIPYNLYGYSSYSPDYTYP
Sbjct: 121 GVGGRNFRVLSSNFQTGFGGNVGSAFHSP--TTFPHYAIHQGIPYNLYGYSSYSPDYTYP 180

Query: 181 TSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYP 240
           TSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQ GYGVQYP
Sbjct: 181 TSYYNVYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQHGYGVQYP 240

Query: 241 HHLFQYSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 287
           HHLFQYS AINS+AATTF QHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 HHLFQYSTAINSSAATTFSQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 289

[Close]
BLAST of PI0018528 vs. NCBI nr
Match: KAA0039354.1 (RNA-binding protein 24 [Cucumis melo var. makuwa])

HSP 1 Score: 537.0 bits (1382), Expect = 1.0e-148
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0 

Query: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60
           MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG
Sbjct: 1   MTPSNLASQFGDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYG 60

Query: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120
           FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN
Sbjct: 61  FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRN 120

Query: 121 NFRVLSSNFQSGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDYTYPTSYYN 180
           NFRVLSSNFQSGFGGNVGSAFHSP TTTFPHYAIQQGIPYNLYG             YYN
Sbjct: 121 NFRVLSSNFQSGFGGNVGSAFHSP-TTTFPHYAIQQGIPYNLYG-------------YYN 180

Query: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240
           VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ
Sbjct: 181 VYGGATAQYPMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQ 240

Query: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 287
           YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR
Sbjct: 241 YSAAINSTAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPIPHR 272

[Close]
BLAST of PI0018528 vs. TAIR 10
Match: AT1G33470.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 249.6 bits (636), Expect = 3.0e-66
Identity = 153/271 (56.46%), Postives = 188/271 (69.37%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           +ACVD +PVIDGRRANCNLA+ GVQRSKPS+P H        G  GGR     ++S F++
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH--------GHVGGRG--MKVTSPFKT 122

Query: 132 GFGGNVGSAFHSPTTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPTSYYNVYGGATAQYP 191
            FG    +A   P+   F HY     +PY N +G+SSYS DY YPTSYYNVYGGATAQ+P
Sbjct: 123 HFG---TAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHP 182

Query: 192 MYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINSTA 251
           MYG+GP  +   AAA AA FYPY QF EG+G       GY  + YP+H+F YSA      
Sbjct: 183 MYGSGP--MTGVAAAPAAGFYPYLQFAEGNG----PVTGYAPLHYPNHMFHYSA-----P 242

Query: 252 ATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 281
              +P H+   P+SL P+ P +PS V  A+P
Sbjct: 243 GGNYP-HHNGSPVSLAPS-PVIPS-VCFAVP 242

[Close]
BLAST of PI0018528 vs. TAIR 10
Match: AT1G33470.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 245.0 bits (624), Expect = 7.5e-65
Identity = 153/272 (56.25%), Postives = 188/272 (69.12%), Query Frame = 0 

Query: 12  DTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAAM 71
           DTT+TKVFVGGLAWETHK +++ YFEQFGDI+EAVVITDK++GRSKGYGFVTF +P+AA 
Sbjct: 3   DTTFTKVFVGGLAWETHKVSLRNYFEQFGDIVEAVVITDKSSGRSKGYGFVTFCDPEAAQ 62

Query: 72  RACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQS 131
           +ACVD +PVIDGRRANCNLA+ GVQRSKPS+P H        G  GGR     ++S F++
Sbjct: 63  KACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIH--------GHVGGRG--MKVTSPFKT 122

Query: 132 GFGGNVGSAFHSPTTTTFPHYAIQQGIPY-NLYGYSSYSPDYTYPT-SYYNVYGGATAQY 191
            FG    +A   P+   F HY     +PY N +G+SSYS DY YPT SYYNVYGGATAQ+
Sbjct: 123 HFG---TAATAIPSPLPFSHYT----LPYTNPFGFSSYSMDYNYPTQSYYNVYGGATAQH 182

Query: 192 PMYGTGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYG-VQYPHHLFQYSAAINST 251
           PMYG+GP  +   AAA AA FYPY QF EG+G       GY  + YP+H+F YSA     
Sbjct: 183 PMYGSGP--MTGVAAAPAAGFYPYLQFAEGNG----PVTGYAPLHYPNHMFHYSA----- 242

Query: 252 AATTFPQHYAAPPMSLPPTPPTLPSGVTMALP 281
               +P H+   P+SL P+ P +PS V  A+P
Sbjct: 243 PGGNYP-HHNGSPVSLAPS-PVIPS-VCFAVP 243

[Close]
BLAST of PI0018528 vs. TAIR 10
Match: AT1G22910.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 240.7 bits (613), Expect = 1.4e-63
Identity = 145/258 (56.20%), Postives = 169/258 (65.50%), Query Frame = 0 

Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQ 130
             ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H        GGGG  NN RV+ S  Q
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH--------GGGGRINNMRVMMSTMQ 127

Query: 131 SGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQ 190
           +GFG         PT T +PH      +P NL+GYS YSPDY ++PT+ Y +YG  +  Q
Sbjct: 128 TGFGPPPPP--QPPTFTHYPH------LPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQ 187

Query: 191 YPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAIN 250
           Y +YG     GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+    
Sbjct: 188 YGVYGNRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN---- 232

Query: 251 STAATTFPQHYAAPPMSL 265
                  P HY+ P  S+
Sbjct: 248 -------PHHYSPPTFSM 232

[Close]
BLAST of PI0018528 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 239.2 bits (609), Expect = 4.1e-63
Identity = 149/273 (54.58%), Postives = 174/273 (63.74%), Query Frame = 0 

Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQ 130
             ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H        GGGG  NN RV+ S  Q
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH--------GGGGRINNMRVMMSTMQ 127

Query: 131 SGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQ 190
           +GFG         PT T +PH      +P NL+GYS YSPDY ++PT+ Y +YG  +  Q
Sbjct: 128 TGFGPPPPP--QPPTFTHYPH------LPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQ 187

Query: 191 YPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAIN 250
           Y +YG     GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+    
Sbjct: 188 YGVYGNRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN---- 247

Query: 251 STAATTFPQHYAAPPMSL-------PPTPPTLP 273
                  P HY+ P  S+       P  PP +P
Sbjct: 248 -------PHHYSPPTFSMQQGVTGFPLQPPLIP 247

[Close]
BLAST of PI0018528 vs. TAIR 10
Match: AT1G22910.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 235.7 bits (600), Expect = 4.5e-62
Identity = 148/277 (53.43%), Postives = 174/277 (62.82%), Query Frame = 0 

Query: 11  GDTTYTKVFVGGLAWETHKDTMKKYFEQFGDILEAVVITDKATGRSKGYGFVTFREPDAA 70
           GDTTYTKVFVGGLAWETHK+TMKK+FEQFG+ILEAVVITDKA+GRSKGYGFVTFRE +AA
Sbjct: 8   GDTTYTKVFVGGLAWETHKETMKKHFEQFGEILEAVVITDKASGRSKGYGFVTFREAEAA 67

Query: 71  MRACVDASPVIDGRRANCNLASLGVQRSKPSTPKHEKKKWELTGGGGGRNNFRVLSSNFQ 130
             ACVDA+PVIDGRRANCNLASLG+QRSKPSTP H        GGGG  NN RV+ S  Q
Sbjct: 68  RSACVDATPVIDGRRANCNLASLGLQRSKPSTPNH--------GGGGRINNMRVMMSTMQ 127

Query: 131 SGFGGNVGSAFHSPTTTTFPHYAIQQGIPYNLYGYSSYSPDY-TYPTSYYNVYGGAT-AQ 190
           +GFG         PT T +PH      +P NL+GYS YSPDY ++PT+ Y +YG  +  Q
Sbjct: 128 TGFGPPPPP--QPPTFTHYPH------LPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQ 187

Query: 191 YPMYG--TGPGGILSGAAAAAAAFYPYFQFGEGSGGGGSGQQGYGVQYPHHLFQYSAAIN 250
           Y +YG     GG L+ AAA+A  FYP        GG G  Q      + HHL  Y+    
Sbjct: 188 YGVYGNRNSGGGGLTAAAASATPFYPC------GGGHGGVQFSQPQPFYHHLSSYN---- 247

Query: 251 STAATTFPQHYAAPPMSLPPTPPTLPSGVTMALPAPI 284
                  P HY+ P  S+        S  T +   P+
Sbjct: 248 -------PHHYSPPTFSMQQGSRNRLSASTTSYSLPL 251

The following BLAST results are available for this feature:
BLAST of PI0018528 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M1S31.6e-2737.27Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S... [more]
Q9BX467.4e-2537.55RNA-binding protein 24 OS=Homo sapiens OX=9606 GN=RBM24 PE=1 SV=1[more]
Q6P8A77.4e-2537.30RNA-binding protein 24 OS=Xenopus tropicalis OX=8364 GN=rbm24 PE=2 SV=1[more]
D3Z4I31.3e-2437.55RNA-binding protein 24 OS=Mus musculus OX=10090 GN=Rbm24 PE=1 SV=1[more]
Q9I8B36.2e-2436.90RNA-binding protein 24-B OS=Xenopus laevis OX=8355 GN=rbm24-b PE=2 SV=1[more]
BLAST of PI0018528 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S4E2E11.1e-15999.65RNA-binding protein 24 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S... [more]
A0A1S4E2E82.8e-15296.85RNA-binding protein 24 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S... [more]
A0A0A0KUN63.7e-15298.21RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G647270 PE=4 SV... [more]
A0A1S4E2E63.7e-15298.21RNA-binding protein 24 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498620 PE=4 S... [more]
A0A5A7T7A34.9e-14995.10RNA-binding protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6... [more]
BLAST of PI0018528 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656046.12.2e-15999.65RNA-binding protein 24 isoform X1 [Cucumis sativus] >XP_016902396.1 PREDICTED: R... [more]
XP_016902398.15.8e-15296.85PREDICTED: RNA-binding protein 24 isoform X3 [Cucumis melo] >XP_031741591.1 RNA-... [more]
XP_016902397.17.5e-15298.21PREDICTED: RNA-binding protein 24 isoform X2 [Cucumis melo] >XP_031741590.1 RNA-... [more]
XP_038890037.11.3e-15194.50RNA-binding protein 24 isoform X1 [Benincasa hispida][more]
KAA0039354.11.0e-14895.10RNA-binding protein 24 [Cucumis melo var. makuwa][more]
BLAST of PI0018528 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G33470.23.0e-6656.46RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G33470.17.5e-6556.25RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G22910.21.4e-6356.20RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G22910.14.1e-6354.58RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT1G22910.34.5e-6253.43RNA-binding (RRM/RBD/RNP motifs) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 17..89
e-value: 9.2E-23
score: 91.6
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 18..73
e-value: 1.7E-15
score: 56.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 16..100
score: 16.551298
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 2..110
e-value: 1.9E-23
score: 84.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..115
NoneNo IPR availablePANTHERPTHR11176:SF16OS01G0876800 PROTEINcoord: 1..281
NoneNo IPR availableCDDcd12384RRM_RBM24_RBM38_likecoord: 16..91
e-value: 2.98581E-41
score: 135.435
IPR037366BOULE/DAZ familyPANTHERPTHR11176BOULE-RELATEDcoord: 1..281
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 15..103

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018528.1PI0018528.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030154 cell differentiation
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003676 nucleic acid binding