PI0018468 (gene) Melon (PI 482460) v1

Overview


Name	PI0018468
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	precursor of CEP7-like
Location	chr08: 19558713 .. 19558997 (-)
RNA-Seq Expression	PI0018468
Synteny	PI0018468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCACTCGGGTCTTAACTTACTTCTTTTTATTCATCATCTTGTCTCACCATCTCGTTGTTATTGAAGGAAGGAGATTGAAAGTAAAGAAAAAGGGGCTACGTTGTGGGACTTGCTTGACTCCCACCACGCCAAAAACCATAACCAAATCAGGAGAGGAAGCACAAAAAAGCATTAACAATAAGCTCCACCACAGAATTGCCGATGGCTATGTGGATGCCTTCCGCCCCACCACCCCTGGCCATAGTCCCGGCGTTGGTCACTCCATTCAAAACCGATAA

mRNA sequence

ATGGCCGCCACTCGGGTCTTAACTTACTTCTTTTTATTCATCATCTTGTCTCACCATCTCGTTGTTATTGAAGGAAGGAGATTGAAAGTAAAGAAAAAGGGGCTACGTTGTGGGACTTGCTTGACTCCCACCACGCCAAAAACCATAACCAAATCAGGAGAGGAAGCACAAAAAAGCATTAACAATAAGCTCCACCACAGAATTGCCGATGGCTATGTGGATGCCTTCCGCCCCACCACCCCTGGCCATAGTCCCGGCGTTGGTCACTCCATTCAAAACCGATAA

Coding sequence (CDS)

ATGGCCGCCACTCGGGTCTTAACTTACTTCTTTTTATTCATCATCTTGTCTCACCATCTCGTTGTTATTGAAGGAAGGAGATTGAAAGTAAAGAAAAAGGGGCTACGTTGTGGGACTTGCTTGACTCCCACCACGCCAAAAACCATAACCAAATCAGGAGAGGAAGCACAAAAAAGCATTAACAATAAGCTCCACCACAGAATTGCCGATGGCTATGTGGATGCCTTCCGCCCCACCACCCCTGGCCATAGTCCCGGCGTTGGTCACTCCATTCAAAACCGATAA

Protein sequence

MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR

Homology

[Close]

BLAST of PI0018468 vs. ExPASy Swiss-Prot
Match: O80460 (Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1)

HSP 1 Score: 48.9 bits (115), Expect = 3.6e-05
Identity = 34/93 (36.56%), Postives = 44/93 (47.31%), Query Frame = 0


Query: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSI 60
          MA   V  + F+F +L+  +  IEGR+L          T  T TT + I   G     S 
Sbjct: 1  MATINVYVFAFIF-LLTISVGSIEGRKL----------TKFTVTTSEEIRAGGSVLSSSP 60

Query: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQN 94
            +         VD FRPT PGHSPG+GHS+ N
Sbjct: 61 PTEPLESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

[Close]

BLAST of PI0018468 vs. ExPASy Swiss-Prot
Match: B3H5A9 (Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 4.7e-05
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 43 PTTPKTITKSGEEAQKSINNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQN 94
          PT+P      G + +++  N      A GY D F PTTPGHSPGVGH+++N
Sbjct: 52 PTSPGNSPGIGHKMKENEEN------AGGYKDDFEPTTPGHSPGVGHAVKN 96

[Close]

BLAST of PI0018468 vs. ExPASy Swiss-Prot
Match: P0DN97 (Precursor of CEP8 OS=Arabidopsis thaliana OX=3702 GN=CEP8 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 8.1e-05
Identity = 25/83 (30.12%), Postives = 42/83 (50.60%), Query Frame = 0


Query: 7  LTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINNKLHH 66
          ++   + I++SH ++  E R L+  +K ++  T         +   G   +  I+ + H 
Sbjct: 11 ISLLIIAILVSHEIIPTEARHLRTHRKSIKNSTLTVHEGAGGLRTGGGSVKTDISKEEHG 70

Query: 67 RIADGYVDAFRPTTPGHSPGVGH 90
                VD FRPTTPG+SPG+GH
Sbjct: 71 ------VDEFRPTTPGNSPGIGH 87

[Close]

BLAST of PI0018468 vs. ExPASy TrEMBL
Match: A0A5D3CP07 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004920 PE=3 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.4e-44
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSI 60
          MAATRVLTYFFLFIILSHHLVVIEGRRLKV KKGLRCGTC+TPTTPKTITKSGEEAQKSI
Sbjct: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVNKKGLRCGTCMTPTTPKTITKSGEEAQKSI 60

Query: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 95
          N KLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR
Sbjct: 61 NKKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 94

[Close]

BLAST of PI0018468 vs. ExPASy TrEMBL
Match: A0A0A0KIB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490780 PE=3 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.2e-44
Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSI 60
          MAATRVLTYFFLFIILSHHLVVIEGRRLKVKK GLRCGTC+TPTTPKTITKS EEAQKS 
Sbjct: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKNGLRCGTCMTPTTPKTITKSEEEAQKST 60

Query: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 95
          NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR
Sbjct: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 94

[Close]

BLAST of PI0018468 vs. ExPASy TrEMBL
Match: A0A7N2M1D5 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.9e-13
Identity = 47/84 (55.95%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 10 FFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINNKLHHRIA 69
          FFL IIL H L+ IEGR L  +KK L C  CL+P T    TK  + A    + K      
Sbjct: 10 FFLLIILCHELLCIEGRNLNPRKK-LECAKCLSPNTKGIATKPRKIAASPSSAK----TT 69

Query: 70 DGYVDAFRPTTPGHSPGVGHSIQN 94
          + YVDAFRPTTPGHSPGVGHSIQN
Sbjct: 70 NDYVDAFRPTTPGHSPGVGHSIQN 88

[Close]

BLAST of PI0018468 vs. ExPASy TrEMBL
Match: M5W563 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G136000 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.0e-10
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 10 FFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINNKLHHRIA 69
          FFL +I SH L+ IEGR L V  K L+C  CL+P  PKT     +E    + +      +
Sbjct: 11 FFLLMIFSHELICIEGRNLNV-SKDLKCVKCLSP-DPKTSAGEVDEEHTLVESP-----S 70

Query: 70 DGYVDAFRPTTPGHSPGVGHSIQN 94
           G+V+AFRPTTPGHSPGVGH++ N
Sbjct: 71 PGHVEAFRPTTPGHSPGVGHAVHN 87

[Close]

BLAST of PI0018468 vs. ExPASy TrEMBL
Match: A0A314Z944 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_35999 PE=3 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-10
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 10 FFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINNKLHHRIA 69
          FFL +I SH L+ IEGR +KV  K L+C  CL+P      T++GE   +       H +A
Sbjct: 11 FFLLMIFSHELICIEGRNVKV-NKDLKCVKCLSPDAK---TRAGEAYGE-------HTVA 70

Query: 70 D----GYVDAFRPTTPGHSPGVGHSIQN 94
          +    G+V+AFRPTTPGHSPGVGH++ N
Sbjct: 71 ESPSPGHVEAFRPTTPGHSPGVGHAVHN 87

[Close]

BLAST of PI0018468 vs. NCBI nr
Match: TYK12898.1 (hypothetical protein E5676_scaffold255G004920 [Cucumis melo var. makuwa])

HSP 1 Score: 188.3 bits (477), Expect = 2.9e-44
Identity = 91/94 (96.81%), Postives = 92/94 (97.87%), Query Frame = 0


Query: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSI 60
          MAATRVLTYFFLFIILSHHLVVIEGRRLKV KKGLRCGTC+TPTTPKTITKSGEEAQKSI
Sbjct: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVNKKGLRCGTCMTPTTPKTITKSGEEAQKSI 60

Query: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 95
          N KLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR
Sbjct: 61 NKKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 94

[Close]

BLAST of PI0018468 vs. NCBI nr
Match: KGN48514.1 (hypothetical protein Csa_002922 [Cucumis sativus])

HSP 1 Score: 185.7 bits (470), Expect = 1.9e-43
Identity = 90/94 (95.74%), Postives = 91/94 (96.81%), Query Frame = 0


Query: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSI 60
          MAATRVLTYFFLFIILSHHLVVIEGRRLKVKK GLRCGTC+TPTTPKTITKS EEAQKS 
Sbjct: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKNGLRCGTCMTPTTPKTITKSEEEAQKST 60

Query: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 95
          NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR
Sbjct: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQNR 94

[Close]

BLAST of PI0018468 vs. NCBI nr
Match: KAG6604188.1 (Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 114.4 bits (285), Expect = 5.4e-22
Identity = 64/97 (65.98%), Postives = 68/97 (70.10%), Query Frame = 0


Query: 3  ATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINN 62
          AT  LTYFF F+ILSH LV+IE R LKV          + P TPKTIT S  E Q SINN
Sbjct: 2  ATHFLTYFFAFLILSHQLVLIEARSLKVNS--------INPDTPKTITNS--EPQNSINN 61

Query: 63 ------KLHHRIADGYVDAFRPTTPGHSPGVGHSIQN 94
                KLHHRIADG+VDAFRPTTPGHSPGVGHSIQN
Sbjct: 62 DAKNTKKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN 88

[Close]

BLAST of PI0018468 vs. NCBI nr
Match: ONH96545.1 (hypothetical protein PRUPE_7G136000 [Prunus persica])

HSP 1 Score: 75.9 bits (185), Expect = 2.1e-10
Identity = 41/84 (48.81%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 10 FFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINNKLHHRIA 69
          FFL +I SH L+ IEGR L V  K L+C  CL+P  PKT     +E    + +      +
Sbjct: 11 FFLLMIFSHELICIEGRNLNV-SKDLKCVKCLSP-DPKTSAGEVDEEHTLVESP-----S 70

Query: 70 DGYVDAFRPTTPGHSPGVGHSIQN 94
           G+V+AFRPTTPGHSPGVGH++ N
Sbjct: 71 PGHVEAFRPTTPGHSPGVGHAVHN 87

[Close]

BLAST of PI0018468 vs. NCBI nr
Match: PQQ18182.1 (hypothetical protein Pyn_35999 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 74.7 bits (182), Expect = 4.7e-10
Identity = 42/88 (47.73%), Postives = 56/88 (63.64%), Query Frame = 0


Query: 10 FFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSINNKLHHRIA 69
          FFL +I SH L+ IEGR +KV  K L+C  CL+P      T++GE   +       H +A
Sbjct: 11 FFLLMIFSHELICIEGRNVKV-NKDLKCVKCLSPDAK---TRAGEAYGE-------HTVA 70

Query: 70 D----GYVDAFRPTTPGHSPGVGHSIQN 94
          +    G+V+AFRPTTPGHSPGVGH++ N
Sbjct: 71 ESPSPGHVEAFRPTTPGHSPGVGHAVHN 87

[Close]

BLAST of PI0018468 vs. TAIR 10
Match: AT2G23440.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: root; Has 25 Blast hits to 25 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 2.6e-06
Identity = 34/93 (36.56%), Postives = 44/93 (47.31%), Query Frame = 0


Query: 1  MAATRVLTYFFLFIILSHHLVVIEGRRLKVKKKGLRCGTCLTPTTPKTITKSGEEAQKSI 60
          MA   V  + F+F +L+  +  IEGR+L          T  T TT + I   G     S 
Sbjct: 1  MATINVYVFAFIF-LLTISVGSIEGRKL----------TKFTVTTSEEIRAGGSVLSSSP 60

Query: 61 NNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQN 94
            +         VD FRPT PGHSPG+GHS+ N
Sbjct: 61 PTEPLESPPSHGVDTFRPTEPGHSPGIGHSVHN 82

[Close]

BLAST of PI0018468 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 3.4e-06
Identity = 23/51 (45.10%), Postives = 31/51 (60.78%), Query Frame = 0


Query: 43 PTTPKTITKSGEEAQKSINNKLHHRIADGYVDAFRPTTPGHSPGVGHSIQN 94
          PT+P      G + +++  N      A GY D F PTTPGHSPGVGH+++N
Sbjct: 52 PTSPGNSPGIGHKMKENEEN------AGGYKDDFEPTTPGHSPGVGHAVKN 96

[Close]

BLAST of PI0018468 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 4.1e-04
Identity = 15/20 (75.00%), Postives = 19/20 (95.00%), Query Frame = 0


Query: 74  DAFRPTTPGHSPGVGHSIQN 94
           D F+PTTPGHSPGVGH+++N
Sbjct: 205 DDFKPTTPGHSPGVGHAVKN 224

The following BLAST results are available for this feature:

BLAST of PI0018468 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80460	3.6e-05	36.56	Precursor of CEP3 OS=Arabidopsis thaliana OX=3702 GN=CEP3 PE=1 SV=1	[more]
B3H5A9	4.7e-05	45.10	Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1	[more]
P0DN97	8.1e-05	30.12	Precursor of CEP8 OS=Arabidopsis thaliana OX=3702 GN=CEP8 PE=2 SV=1	[more]

BLAST of PI0018468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CP07	1.4e-44	96.81	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0KIB5	9.2e-44	95.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G490780 PE=3 SV=1	[more]
A0A7N2M1D5	4.9e-13	55.95	Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1	[more]
M5W563	1.0e-10	48.81	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G136000 PE=3 SV=1	[more]
A0A314Z944	2.3e-10	47.73	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_359...	[more]

BLAST of PI0018468 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK12898.1	2.9e-44	96.81	hypothetical protein E5676_scaffold255G004920 [Cucumis melo var. makuwa]	[more]
KGN48514.1	1.9e-43	95.74	hypothetical protein Csa_002922 [Cucumis sativus]	[more]
KAG6604188.1	5.4e-22	65.98	Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]	[more]
ONH96545.1	2.1e-10	48.81	hypothetical protein PRUPE_7G136000 [Prunus persica]	[more]
PQQ18182.1	4.7e-10	47.73	hypothetical protein Pyn_35999 [Prunus yedoensis var. nudiflora]	[more]

BLAST of PI0018468 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G23440.1	2.6e-06	36.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G66816.1	3.4e-06	45.10	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G50610.1	4.1e-04	75.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 92..94
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..94
None	No IPR available	PANTHER	PTHR33348:SF28	PRECURSOR OF CEP7	coord: 4..93
IPR033250	C-terminally encoded peptide	PANTHER	PTHR33348	PRECURSOR OF CEP5	coord: 4..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018468.1	PI0018468.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902025	nitrate import
biological_process	GO:1901371	regulation of leaf morphogenesis
biological_process	GO:2000280	regulation of root development
biological_process	GO:0007165	signal transduction
biological_process	GO:0048364	root development
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005179	hormone activity