PI0018417 (gene) Melon (PI 482460) v1

Overview


Name	PI0018417
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr02: 16605252 .. 16606517 (+)
RNA-Seq Expression	PI0018417
Synteny	PI0018417

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCTGAGTTAGTTTACAATGAACCAAATATGTTTGAGAGCTACTACTGATATTGCAATTCTATATTAAAGTAAAATCTCTTAGGATTTCCTATTTTCTTGAGTTCCTCCACTATAGGCAATGTATTTTACGAATAATTATCATGAATGATATGCCTTCTCTCCCGTTTGTACTCTCATGTTACTATGTTTCAACTCTATATCTGAGTGTAGTTTGAGAGCAAATTTCTAGAAGCTGACGCAGGGTAGCACAAGGGTTTCACATTACTATATTGACACAAATCCCATAAACGATTTGTTACAATTGGTCTTTTTTGTTATCATTATTTTTTCTTATGCAACTCCTTGTTGTTTTCCAAGAACGTGACTGGATACAATTATTAACTATTAGAGAAAAAAGCCTTTCCCTTTCTCAAAGGCCTGTCGTGATTAGCTACGGCTAAACGACAGTTGATTGTGTAATATCAGAGTAAGTATAAATTTGTATGGTGCATGCTTACAGAAATAGGCAATCTACTCTACTTGCAGTCTGAATCATTTTTTTATCAATTGGGGTTGGATTTATGTAGTCATTGACTTTCTAGATAGCCACTGAATATAGTATATAATGGTTCTCACTTTGCAGGATGCATTATACAAGTACTTGAAAATTCCCAACTTTAAAAATTCGTTGGTTGCAAACTAACTTCTTGGATACAAGTCAAACTTTCATTCTTTGCCAGATATATTGAAAGTGCGGAGGTCCCAGTGTCAGCAGCAGTTGATGATTTGCAGCTTCAACCACGTACTTCTATTCTTCCCTTTCTCTCTTTTGAAGAATCATCCATCCACAGGGCATCTGCTTTGGCTTCCTGTCTTATTTCACTCATGGTATGTTCTATCAACTTCATCTAGACAGCTTTTTCATCTTTCTTGATTCTTCAATTCCTTTTCCTTGTTTGATAACAACATATATGTATCTGATATTCAATACTTCAGTTAATTTTTTTTCATATCCTCAACTGTCAGTTATTGAACAATCAACAATGAACCTTCTCTTTTTCTTTTTTTTGGTCGCAGAATCTTACCCCTTTCTGTTTAGGTCACTCGTAAGGCTGCTACTATCCCTAATTGTCCAGCCTGCAGCCTCTGTCTCAACCTTGCTTTTTTACAGTGACATTCTTCCTCAGCATATGGTTTCGGAGCGACTTGTACGACATGAATTGCTCGATCGAGAAAACTACCTATTCCATTTTCTTGTTAACTTTTTGAAGTGCTTTTGGTGA

mRNA sequence

ATGAAATCTTACCCCTTTCTGTTTAGGTCACTCGTAAGGCTGCTACTATCCCTAATTGTCCAGCCTGCAGCCTCTGTCTCAACCTTGCTTTTTTACAGTGACATTCTTCCTCAGCATATGGTTTCGGAGCGACTTGTACGACATGAATTGCTCGATCGAGAAAACTACCTATTCCATTTTCTTGTTAACTTTTTGAAGTGCTTTTGGTGA

Coding sequence (CDS)

ATGAAATCTTACCCCTTTCTGTTTAGGTCACTCGTAAGGCTGCTACTATCCCTAATTGTCCAGCCTGCAGCCTCTGTCTCAACCTTGCTTTTTTACAGTGACATTCTTCCTCAGCATATGGTTTCGGAGCGACTTGTACGACATGAATTGCTCGATCGAGAAAACTACCTATTCCATTTTCTTGTTAACTTTTTGAAGTGCTTTTGGTGA

Protein sequence

MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHFLVNFLKCFW

Homology

[Close]

BLAST of PI0018417 vs. ExPASy TrEMBL
Match: A0A0A0LTU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G366970 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-26
Identity = 65/69 (94.20%), Postives = 65/69 (94.20%), Query Frame = 0


Query: 1  MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60
          M   PFLFRSLVRLLLSLIVQP ASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF
Sbjct: 1  MNLTPFLFRSLVRLLLSLIVQPVASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60

Query: 61 LVNFLKCFW 70
          LVNFLKCFW
Sbjct: 61 LVNFLKCFW 69

[Close]

BLAST of PI0018417 vs. ExPASy TrEMBL
Match: A0A2P6RJI3 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090511 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-20
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 5  PFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHFLVNF 64
          P +FRSLVRLL SLI  PAAS+STLLFYS++LPQ++V ERLVRHELLD+ENYLFHFLVNF
Sbjct: 5  PLMFRSLVRLLTSLIRDPAASISTLLFYSELLPQNIVLERLVRHELLDQENYLFHFLVNF 64

Query: 65 LKCFW 70
          L+CFW
Sbjct: 65 LRCFW 69

[Close]

BLAST of PI0018417 vs. ExPASy TrEMBL
Match: A0A314UPA4 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_28550 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-20
Identity = 51/69 (73.91%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60
          M   P +FRSL+RLL SLI +PAASVSTLL+YS++LPQ+++ ERLVRHELLDRENYLFHF
Sbjct: 1  MSLTPLMFRSLMRLLTSLIGEPAASVSTLLYYSELLPQNIILERLVRHELLDRENYLFHF 60

Query: 61 LVNFLKCFW 70
          L+NFL+CFW
Sbjct: 61 LINFLRCFW 69

[Close]

BLAST of PI0018417 vs. ExPASy TrEMBL
Match: A0A315A6J3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_16745 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 4.0e-20
Identity = 51/69 (73.91%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60
          M   P +FRSL+RLL SLI +PAASVSTLL+YS++LPQ+++ ERLVRHELLDRENYLFHF
Sbjct: 1  MSLTPLMFRSLMRLLTSLIGEPAASVSTLLYYSELLPQNIILERLVRHELLDRENYLFHF 60

Query: 61 LVNFLKCFW 70
          L+NFL+CFW
Sbjct: 61 LINFLRCFW 69

[Close]

BLAST of PI0018417 vs. ExPASy TrEMBL
Match: A0A438JQ32 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_013430 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 8.9e-20
Identity = 50/69 (72.46%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1   MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60
           M   P +FRSLVRL+ SL+ QPAAS+STLL+YSD+LPQ++V ERLV+HELLD+ENYLFHF
Sbjct: 72  MSLTPLMFRSLVRLVSSLVGQPAASISTLLYYSDLLPQNIVLERLVQHELLDQENYLFHF 131

Query: 61  LVNFLKCFW 70
           L+NFL+CFW
Sbjct: 132 LINFLRCFW 140

[Close]

BLAST of PI0018417 vs. NCBI nr
Match: KAE8653118.1 (hypothetical protein Csa_023927, partial [Cucumis sativus])

HSP 1 Score: 126.7 bits (317), Expect = 7.7e-26
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0


Query: 5  PFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHFLVNF 64
          PFLFRSLVRLLLSLIVQP ASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHFLVNF
Sbjct: 4  PFLFRSLVRLLLSLIVQPVASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHFLVNF 63

Query: 65 LKCFW 70
          LKCFW
Sbjct: 64 LKCFW 68

[Close]

BLAST of PI0018417 vs. NCBI nr
Match: PRQ46575.1 (hypothetical protein RchiOBHm_Chr2g0090511 [Rosa chinensis])

HSP 1 Score: 106.7 bits (265), Expect = 8.2e-20
Identity = 52/65 (80.00%), Postives = 60/65 (92.31%), Query Frame = 0


Query: 5  PFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHFLVNF 64
          P +FRSLVRLL SLI  PAAS+STLLFYS++LPQ++V ERLVRHELLD+ENYLFHFLVNF
Sbjct: 5  PLMFRSLVRLLTSLIRDPAASISTLLFYSELLPQNIVLERLVRHELLDQENYLFHFLVNF 64

Query: 65 LKCFW 70
          L+CFW
Sbjct: 65 LRCFW 69

[Close]

BLAST of PI0018417 vs. NCBI nr
Match: PQM39313.1 (hypothetical protein Pyn_28550 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 106.7 bits (265), Expect = 8.2e-20
Identity = 51/69 (73.91%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60
          M   P +FRSL+RLL SLI +PAASVSTLL+YS++LPQ+++ ERLVRHELLDRENYLFHF
Sbjct: 1  MSLTPLMFRSLMRLLTSLIGEPAASVSTLLYYSELLPQNIILERLVRHELLDRENYLFHF 60

Query: 61 LVNFLKCFW 70
          L+NFL+CFW
Sbjct: 61 LINFLRCFW 69

[Close]

BLAST of PI0018417 vs. NCBI nr
Match: PQQ09806.1 (hypothetical protein Pyn_16745 [Prunus yedoensis var. nudiflora])

HSP 1 Score: 106.7 bits (265), Expect = 8.2e-20
Identity = 51/69 (73.91%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1  MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60
          M   P +FRSL+RLL SLI +PAASVSTLL+YS++LPQ+++ ERLVRHELLDRENYLFHF
Sbjct: 1  MSLTPLMFRSLMRLLTSLIGEPAASVSTLLYYSELLPQNIILERLVRHELLDRENYLFHF 60

Query: 61 LVNFLKCFW 70
          L+NFL+CFW
Sbjct: 61 LINFLRCFW 69

[Close]

BLAST of PI0018417 vs. NCBI nr
Match: XP_002281062.2 (PREDICTED: uncharacterized protein LOC100257802 isoform X1 [Vitis vinifera] >RVW47572.1 hypothetical protein CK203_073758 [Vitis vinifera])

HSP 1 Score: 105.5 bits (262), Expect = 1.8e-19
Identity = 50/69 (72.46%), Postives = 62/69 (89.86%), Query Frame = 0


Query: 1   MKSYPFLFRSLVRLLLSLIVQPAASVSTLLFYSDILPQHMVSERLVRHELLDRENYLFHF 60
           M   P +FRSLVRL+ SL+ QPAAS+STLL+YSD+LPQ++V ERLV+HELLD+ENYLFHF
Sbjct: 72  MSLTPLMFRSLVRLVSSLVGQPAASISTLLYYSDLLPQNIVLERLVQHELLDQENYLFHF 131

Query: 61  LVNFLKCFW 70
           L+NFL+CFW
Sbjct: 132 LINFLRCFW 140

The following BLAST results are available for this feature:

BLAST of PI0018417 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018417 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LTU9	2.8e-26	94.20	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G366970 PE=4 SV=1	[more]
A0A2P6RJI3	4.0e-20	80.00	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0090511 PE=4...	[more]
A0A314UPA4	4.0e-20	73.91	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_285...	[more]
A0A315A6J3	4.0e-20	73.91	Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_167...	[more]
A0A438JQ32	8.9e-20	72.46	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_013430 PE=4 SV=1	[more]

BLAST of PI0018417 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653118.1	7.7e-26	98.46	hypothetical protein Csa_023927, partial [Cucumis sativus]	[more]
PRQ46575.1	8.2e-20	80.00	hypothetical protein RchiOBHm_Chr2g0090511 [Rosa chinensis]	[more]
PQM39313.1	8.2e-20	73.91	hypothetical protein Pyn_28550 [Prunus yedoensis var. nudiflora]	[more]
PQQ09806.1	8.2e-20	73.91	hypothetical protein Pyn_16745 [Prunus yedoensis var. nudiflora]	[more]
XP_002281062.2	1.8e-19	72.46	PREDICTED: uncharacterized protein LOC100257802 isoform X1 [Vitis vinifera] >RVW...	[more]

BLAST of PI0018417 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37900:SF7	SUBFAMILY NOT NAMED	coord: 4..68
None	No IPR available	PANTHER	PTHR37900	FAMILY NOT NAMED	coord: 4..68

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018417.1	PI0018417.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane