PI0018361 (gene) Melon (PI 482460) v1

Overview


Name	PI0018361
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chr01: 22904213 .. 22908880 (-)
RNA-Seq Expression	PI0018361
Synteny	PI0018361

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCAACTTCAAAGACGGTACCTTCCGCTTCTTCCATTGTTAAACCTAACCTCTCTTCCTCTCTATTTACTCACTCTCCTACCATTCCATCATCAAATCCCCAAATTTCATCTGCAATTCATCCTATATCCCTAAATGTATCACCCCAAAACTTCATTCTATCCATTTCGTTTCAACAGCAGCTTTCAGTGTTCCTACACAATTGCAAGACAGGTAACATTAGTGCAACTCAAGCCTTCCAATTCTTTCACCAAATGATGCGTTCAAATCCTACCCCTCCCTTATCTTCTTTCACTCATTTACTTTCTGGACTTACTAAGATTAAGCATTACTCTCATGTATTTTATCTCTATAATCGAATGCGTCTATCTGGACTTTCACCTGATTGCTGCACTCTGAATATATTGTTGGATTGCCTTTGTAATGTGAATCGGGTTGGCGAAGGTCTTGCGGTCATGGCAGGGATTTTAAGGAGAGGTTACATTCCTGATATAGTTACATATACCACCTTAATTAAGGGCTTGTGTATGGAGCATAGGATTAGTGAAGCTACACGGCTATTTAGGAGAATGCAAAAGTTAGGTTGTAGGCCTAATGTGATTACTTATGGGACTTTAATGAAGGGGCTCTGTCAAACGGGGAATATTAACGTTGCACTTGATTTACATCAAGAAATGCTCAATGACAATAGTCAATATGGGATTAAATGTAAACCTACTGTTATTTCCTATAATATCGTTATAGATGGACTTTGTAAGGATAAACGGGAAGACGAGGCAATAGAACTTTTCAAGGAAATGAAAGCTCAGGGGATGATGCCCGATGTCATTTCATATACCTCTTTGATTCATGGATTTTGTTGTGGTGGAAAGTGGGAAAAGGCTAAACATATGTTTGACGAGATGGTGAATCAAGGTGTTCAACCAAACATGGTCACATTCAATGTGTTGATTGATGTGCTTTGCAAAGAAGGAAAGGTTATTGAGGCTAAGGAGTTGCTAGAGGTAATGATTCAAAGAGGCATCGTTCCTAATTTGCTTACTTATAATTCAATGATTTATGGGTTTTGTTTGGTTGGTGATCTTAATAGTGCAAGGGAATTATTTGTTAGCATGTCAAGTAAGGGATATGAACCGGATGTGATTTGCTACACTGTGCTAATTAATGGGTATTGTAAAACCTTGAAGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAGTGGGAAAGAGGCCAGATGTGAAAACATATGGTGCCTTGTTAATAGGGCTTTTCCAGAGAGGCAATGTTGGTGATGCAAAGAAGCTATTTGGTGTCATGAAAGCTTATGGTATTCCTAAAGATTTATATATATATGGTATTTTCTTAAATGGGTTGTTTAAGAATGGTTGTTTATTTGAAGCGATGGAACTTTTCAATAAACTAAAATCATACAACATGAAATTGGACATTGAATGCTTTAATTGTCTAATTGATGGCCTATGCAAAGTAGGGAAACTTGAAACTGCTTGGGAGCTATTCGAAAAACTACCCCAAGAAGGGCTTCAACCAGATAGTGTGACGTATAATATTATGATCCATGGATTTTGCAGAGGGGGACAAGTAGATAAGGCAAATATTCTATTTCAAAAGATGGAAAAAAATGGTTGTACTCCCAACAGAATTACTTATACTACACTTCTGCGAGGTTTCTTTGAAAGTAATAAATTAGAGAAGGTAGTTGAAGTTCTTCATATGATGGTTCAGAGGGATGTATCGCTAGATGCCAACATTTTGCGTCAATATCATAGGCACCCTTTGCAAAATTGAAAAATATTAAGAATGTCTAGACTTGCTTCCAAGGTTTTCTGTCCAAGAGTATTAACGTTGATAATATAACACTTATTGGTAGACTCATTAAGGGCCAACGACTTGTAAATTTCTAATCAACTACAAGAAGAAACGAAACATTGTTTTATGGACTCGATAGGTATCCACTTCTTTTTCTTCTATGTTCCACTTTTTAGTATTGTAGATTGCTTGCCTTTATAGGTCCTTTCACTTTGATTTTTTGATATGCGTTATTGGGGTTTCAGGAGGATCATATTTATCAGCACATTAGCTTGCATGGAACAAATAAGTACGTTCTCTTAGTCATTGAATCTATCTTTTATGTTTTTCACTCAACATTGTTTGTCCGATTTAGTTTACTGAATATGTGATTGATTGTTGATGTAATCAAATGCGCAATTTGTCAATCATTGCATCCAAATTCAAGTATAAGAAAACAAGATAGTGTTGAAGATCATCGAAGTGATGAGAACCATAATAGCTATTAGATTGAGGATTATTGTTGTATTCTATTAATACTAAGGGAATGTTTGGAGTAAAGAGTGGAGTTGTCATGAGGCCCCCAATATAAGGATTTAATACGACATGCAATAGATGTTTTTAATTGTGGGCCCATGAACTTCTTGGCAAAACAAAGAGTGGAGTTAGCAACTGTACTCCCCTAATTCGAACTTCTTGGACCAAACAACCCCTAATCGTTTCTATTGAAAAGAAAAGACAAGATATACGTGGAAAACCCTAGTACAGGGAGAAAAAACCACAATAAAGGCCACTCTTATTATTTTCTAATAATCAAAAGAGTACAAGAGGGGAGAATATATATAGGCTATAATAAGCCCTAACAAAAAAGGAAATAAAACTAGGGTACAATAAATTAGACAAATACCATTAGGGCTATAAACACTCCACTAGCCCTAATTTCCAACACTCCCCCTCAAGTTGGAGCATAGATGTCAATTAGGCCCAACTTGCTAACACAATGGTCAAAGCTCTGCCTGAGTAACACTTTGGTGAGGACATCAACAATTTGTTAACTAGAAGAAATGTACGGGATGTAGATACTGCCATTGTCAAGTTTCTCCTTTATAAAATGTTTGTCCATCTCCACATGTTTCGTTCTGTCACGTTGAACTGGGTTATTAGCTATGCTTAGAGCAACTTTATTGTCACAGAAGAGCTTCATAGGTAACTCATAGTCCTGGTGAAGATCAGACAACTTTCTGCAGCCAGATCTCTTCACAGGTTCCCAAACTCATAGCTCTATATTCGGCTTTAGCACTACTCCTAGCTACAACACCCTGCTTCTTACTCCTCCAAGTAACATGATTACCCCACAAAAGGTACAATATCCTAAAGTGGACTTTCTATCAGTAACTGATCCTGCCCAATCAGAGTCAGTATAAACCTTAATCCATTTTCTATCAGTTTTCCGGAACATCAGACCTTTACCTGGAGTAGTTTTCAAGTATCTCAAAATGCGATTCACAGCTTCCATGTGTTCTTTTTAGGGTGCTTGCATAAACTAACTAACAGTGCTAACTGCATAGGAGATATTTGGTCTTGTGTGAGATAGATAAATCAACTTTCCCACTAAACATTGATACTTCTCTTTGTCAATAGGAACTTTGTCACTAGGATTTCCCAGTTTTGCGTTGAATTCCATAGGGGTATCAGCAGGTCTGCATCTAGTCATACATGTTTCCTTTAACAAGTCAAGAGTATACTTCTTTTGTGAAACAGAGATTCCTTCCCTCGATTGAGCCACCTCCATCCCAAGGAAGTACTTCAAATTCCCTAGGTCCAAACTTGTCACCCATATTCTTTTTCAGCCTGGTAATCTCAACAACATCATCTCCAGACAAGACAATATCATCGACCTACACAATCAACACGGCAATTTTCCTAGATTCAGACCTTTTTGTAAACAGTGTGTGATCATAATATCCCTGAGAGAAGCCTTGAGATTTAACGATGGCGGTAAATCTGTCAAACCATGTCCTGGGAGATTGTTTCAAACCATAAAGAGATTTTCGAAGCTTACAAACTTGGTGGTCAAACTGAACTTCAAAGCCTGGAGGAGGACTCGTGTACACTTCTTCTTCCAAATCACCATTTAGGAAATCATTTTTTACATCAAGTTGATAGAGAGGCCACTCTTTATTGACTGCAACAGACAGAAGAACCCTGATTGTGTTTAACTTTGCCACAGGAGAAAAAGACATTGAATAATCCACCCCATAAGTTTGAGTGAACCCTTTTGCAACAAGCCTTGCCTTGTACCTATCAAGGTCCCATTTGATTTGTACTTCAGAGTGAACACCCATTTGCATCCCACTATCTTGTGCCCTTTAGGAAGAGTGCAAAGATCCCATGTCTTATTCTTCTCAAGTGCTCCCATTTCTTCCATGACAGTCATCTTCCACTCAGGACTTTCCATAGCTTCATGTATGTTCTTTGGTATTGTTGCAGCATCGAGACTTGAAGTAAACGCCTTGAACTTAGGCGATAGATTACTGTAAGACATGTAATTACACATAGAGTGCTTCGTACAAGACCTAGTATCCTTTCTCAAGGCAATGGGCATGTCAAGGGAGGGATCATAACTCTCTAGCTTTTCTAAGCCATCCGAGCTAGTCTCACGCACCTGTGTCTGTTAGAGTTTCATCGCTTCTGGCAATCCTATTCTCTTCTGGAACTGTCATATTAGTTCTGTCATCCTCAACCACATCAACAATATCATCCTCAACACACAAGTTATTATTACTAAGTTCAGGAGTACCTTGAGCTTGTGTTGGTTCAGATTCATGGACCAAGCCAACGAAGCAGTAG

mRNA sequence

ATGGCTTCAACTTCAAAGACGGTACCTTCCGCTTCTTCCATTGTTAAACCTAACCTCTCTTCCTCTCTATTTACTCACTCTCCTACCATTCCATCATCAAATCCCCAAATTTCATCTGCAATTCATCCTATATCCCTAAATGTATCACCCCAAAACTTCATTCTATCCATTTCGTTTCAACAGCAGCTTTCAGTGTTCCTACACAATTGCAAGACAGGTAACATTAGTGCAACTCAAGCCTTCCAATTCTTTCACCAAATGATGCGTTCAAATCCTACCCCTCCCTTATCTTCTTTCACTCATTTACTTTCTGGACTTACTAAGATTAAGCATTACTCTCATGTATTTTATCTCTATAATCGAATGCGTCTATCTGGACTTTCACCTGATTGCTGCACTCTGAATATATTGTTGGATTGCCTTTGTAATGTGAATCGGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAGTGGGAAAGAGGCCAGATGTGAAAACATATGGTGCCTTGTTAATAGGGCTTTTCCAGAGAGGCAATGTTGGTGATGCAAAGAAGCTATTTGGTGTCATGAAAGCTTATGAATGTCTAGACTTGCTTCCAAGGAGGATCATATTTATCAGCACATTAGCTTGCATGGAACAAATAAATCTCTTCACAGGTTCCCAAACTCATACTTGTGTTGGTTCAGATTCATGGACCAAGCCAACGAAGCAGTAG

Coding sequence (CDS)

ATGGCTTCAACTTCAAAGACGGTACCTTCCGCTTCTTCCATTGTTAAACCTAACCTCTCTTCCTCTCTATTTACTCACTCTCCTACCATTCCATCATCAAATCCCCAAATTTCATCTGCAATTCATCCTATATCCCTAAATGTATCACCCCAAAACTTCATTCTATCCATTTCGTTTCAACAGCAGCTTTCAGTGTTCCTACACAATTGCAAGACAGGTAACATTAGTGCAACTCAAGCCTTCCAATTCTTTCACCAAATGATGCGTTCAAATCCTACCCCTCCCTTATCTTCTTTCACTCATTTACTTTCTGGACTTACTAAGATTAAGCATTACTCTCATGTATTTTATCTCTATAATCGAATGCGTCTATCTGGACTTTCACCTGATTGCTGCACTCTGAATATATTGTTGGATTGCCTTTGTAATGTGAATCGGGTGGAAGAAGCAATGAAGATTTACAATGAAATGCTTCAAGTGGGAAAGAGGCCAGATGTGAAAACATATGGTGCCTTGTTAATAGGGCTTTTCCAGAGAGGCAATGTTGGTGATGCAAAGAAGCTATTTGGTGTCATGAAAGCTTATGAATGTCTAGACTTGCTTCCAAGGAGGATCATATTTATCAGCACATTAGCTTGCATGGAACAAATAAATCTCTTCACAGGTTCCCAAACTCATACTTGTGTTGGTTCAGATTCATGGACCAAGCCAACGAAGCAGTAG

Protein sequence

MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQQQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLFGVMKAYECLDLLPRRIIFISTLACMEQINLFTGSQTHTCVGSDSWTKPTKQ

Homology

[Close]

BLAST of PI0018361 vs. ExPASy Swiss-Prot
Match: Q9FMD3 (Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g16640 PE=2 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15
Identity = 40/110 (36.36%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 83  FFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSPDCCTLNILLDCLC 142
           FFH M++  P P ++ F+ LLS ++K+K Y  V YL+ +M++ G+  + CT NILL+C C
Sbjct: 69  FFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 128

Query: 143 NVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLFGVM 193
             +++  A+    +M+++G  P + T+G+LL G  +   V DA  +F  M
Sbjct: 129 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177

[Close]

BLAST of PI0018361 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 8.4e-14
Identity = 40/125 (32.00%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 70  CKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSP 129
           C+ G++   +A + FH+M      P   +FT L++G  K  H    F ++N M  +G SP
Sbjct: 397 CQIGDM--VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 456

Query: 130 DCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLF 189
           +  T   L+D LC    ++ A ++ +EM ++G +P++ TY +++ GL + GN+ +A KL 
Sbjct: 457 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 516

Query: 190 GVMKA 195
           G  +A
Sbjct: 517 GEFEA 519

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BLAST of PI0018361 vs. ExPASy Swiss-Prot
Match: Q9SI78 (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana OX=3702 GN=At1g62720 PE=2 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 9.3e-13
Identity = 38/123 (30.89%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 71  KTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSPD 130
           K  +++  +    F +M++S P P +  F+ +LS + K K+Y  V  L++ M + G+  D
Sbjct: 44  KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103

Query: 131 CCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLFG 190
             + NI+++CLC  +R   A+ +  +M++ G  PDV T  +L+ G  Q   V DA  L  
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163

Query: 191 VMK 194
            M+
Sbjct: 164 KME 166

[Close]

BLAST of PI0018361 vs. ExPASy Swiss-Prot
Match: Q9SIC9 (Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g31400 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 43/124 (34.68%), Postives = 61/124 (49.19%), Query Frame = 0


Query: 70  CKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSP 129
           CK G +    AF+   QM      P + S++ ++ G  K   +     L+  MR  G++ 
Sbjct: 385 CKGGQMDL--AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIAL 444

Query: 130 DCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLF 189
           D  + N LL     V R EEA+ I  EM  VG + DV TY ALL G  ++G   + KK+F
Sbjct: 445 DRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVF 504

Query: 190 GVMK 194
             MK
Sbjct: 505 TEMK 506

[Close]

BLAST of PI0018361 vs. ExPASy Swiss-Prot
Match: Q9LFC5 (Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX=3702 GN=At5g01110 PE=2 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 64  SVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMR 123
           S+ +  CK G++  T+  + F  M   +  P L  F+ ++S  T+  +       +N ++
Sbjct: 345 SLLMEACKKGDVVETE--KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 404

Query: 124 LSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVG 183
            +GL PD     IL+   C    +  AM + NEMLQ G   DV TY  +L GL +R  +G
Sbjct: 405 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 464

Query: 184 DAKKLFGVM 193
           +A KLF  M
Sbjct: 465 EADKLFNEM 471

[Close]

BLAST of PI0018361 vs. ExPASy TrEMBL
Match: A0A0A0K5F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374710 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 3.9e-99
Identity = 201/257 (78.21%), Postives = 213/257 (82.88%), Query Frame = 0


Query: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQ 60
           MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNP  SSA+H  SLNVSPQNF   ISFQ
Sbjct: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQ 60

Query: 61  QQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYN 120
           QQLS+FLHNCKTGNI+ATQAFQFFH MM SNPTPPLSSFTHLLSGL KIKHYS VFYLYN
Sbjct: 61  QQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYN 120

Query: 121 RMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRG 180
           +MRLSG+SPDCCTLNILL+CLCNVNRVEEAMK+YN MLQVGKRPDVKTYGALL GLFQ G
Sbjct: 121 QMRLSGISPDCCTLNILLNCLCNVNRVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 180

Query: 181 NVGDAKKLFGVMKAY----------ECLDLLPRRIIFI-STLACMEQIN--LFT------ 238
            VGDAKKLFGVMK Y           CLDLLPRRIIFI STLACMEQI+  L T      
Sbjct: 181 KVGDAKKLFGVMKVYGMPCKIEKYQACLDLLPRRIIFINSTLACMEQISWRLLTLTSWVD 240

[Close]

BLAST of PI0018361 vs. ExPASy TrEMBL
Match: A0A5D3CCW0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold886G00420 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 6.5e-70
Identity = 143/197 (72.59%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQ 60
           MASTSKTVPSASSIV+PNLSSSLFTHSP IPSSNPQ SS IHP SL+VSPQNF   IS Q
Sbjct: 1   MASTSKTVPSASSIVRPNLSSSLFTHSPIIPSSNPQFSSPIHPKSLHVSPQNFNTPISCQ 60

Query: 61  QQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYN 120
           QQLS+FLHNCKTGNI+ATQAF FFH MM SNPTPPLSSFTHLLSGLTKIKHYS VFYLYN
Sbjct: 61  QQLSMFLHNCKTGNITATQAFHFFHLMMCSNPTPPLSSFTHLLSGLTKIKHYSQVFYLYN 120

Query: 121 RMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRG 180
           +MRLSGLSPDCCTLNILL+CLCN+NRV E + +   +L+ G  PD+ TY  L+ GL    
Sbjct: 121 QMRLSGLSPDCCTLNILLNCLCNLNRVGEGLAVMAGILRRGYVPDIVTYTTLIKGLCMEH 180

Query: 181 NVGDAKKLFGVMKAYEC 198
            +  A  LF  M+   C
Sbjct: 181 RISKATLLFTRMQKLGC 197

[Close]

BLAST of PI0018361 vs. ExPASy TrEMBL
Match: A0A1S4DYL3 (pentatricopeptide repeat-containing protein At1g63330-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492587 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 6.5e-70
Identity = 143/197 (72.59%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQ 60
           MASTSKTVPSASSIV+PNLSSSLFTHSP IPSSNPQ SS IHP SL+VSPQNF   IS Q
Sbjct: 1   MASTSKTVPSASSIVRPNLSSSLFTHSPIIPSSNPQFSSPIHPKSLHVSPQNFNTPISCQ 60

Query: 61  QQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYN 120
           QQLS+FLHNCKTGNI+ATQAF FFH MM SNPTPPLSSFTHLLSGLTKIKHYS VFYLYN
Sbjct: 61  QQLSMFLHNCKTGNITATQAFHFFHLMMCSNPTPPLSSFTHLLSGLTKIKHYSQVFYLYN 120

Query: 121 RMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRG 180
           +MRLSGLSPDCCTLNILL+CLCN+NRV E + +   +L+ G  PD+ TY  L+ GL    
Sbjct: 121 QMRLSGLSPDCCTLNILLNCLCNLNRVGEGLAVMAGILRRGYVPDIVTYTTLIKGLCMEH 180

Query: 181 NVGDAKKLFGVMKAYEC 198
            +  A  LF  M+   C
Sbjct: 181 RISKATLLFTRMQKLGC 197

[Close]

BLAST of PI0018361 vs. ExPASy TrEMBL
Match: A0A0A0K784 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380110 PE=4 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 7.8e-55
Identity = 127/192 (66.15%), Postives = 141/192 (73.44%), Query Frame = 0


Query: 5   SKT-VPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQQQL 64
           SKT +PS S   KPNL S L THS TIPSS PQ SS  HP  +  +  N    ISF   L
Sbjct: 3   SKTLLPSPS--FKPNL-SPLSTHSSTIPSSIPQTSSTHHPNPILPAAFN-REEISFHHPL 62

Query: 65  SVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMR 124
           S+FL NCKTGNI+A QAF FF  MMRS+P PP+SSF  LL GL KI HYS +F LYN MR
Sbjct: 63  SLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMR 122

Query: 125 LSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVG 184
           L+GLSPD  TL+IL +CLCNVNRV+EAM +YNEMLQVGKRP+  TYG LL GLFQ G VG
Sbjct: 123 LAGLSPDLFTLSILANCLCNVNRVKEAMNLYNEMLQVGKRPNATTYGTLLTGLFQTGKVG 182

Query: 185 DAKKLFGVMKAY 196
           DAKKLFGVMK Y
Sbjct: 183 DAKKLFGVMKTY 190

[Close]

BLAST of PI0018361 vs. ExPASy TrEMBL
Match: A0A0A0K5M0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387770 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.9e-53
Identity = 126/192 (65.62%), Postives = 142/192 (73.96%), Query Frame = 0


Query: 5   SKT-VPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQQQL 64
           SKT +PSAS   KPNL S L T S TIPSS PQ SS  HP ++  +  N    ISF   L
Sbjct: 3   SKTLLPSAS--FKPNL-SPLCTLSSTIPSSIPQTSSTNHPNTVLPAAFN-RKGISFHHPL 62

Query: 65  SVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMR 124
           S+FL NCKTGNI+ATQAF FF  M+RS P PP+SSF  LL GL KI HYS +F LYN+MR
Sbjct: 63  SLFLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFNCLLGGLAKINHYSQLFSLYNKMR 122

Query: 125 LSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVG 184
           L+GLSPD  TL+IL +CLCNVNRVEEAM +YNEMLQVGKRP+  TYG LL GLFQ G VG
Sbjct: 123 LAGLSPDLFTLSILANCLCNVNRVEEAMNLYNEMLQVGKRPNATTYGTLLTGLFQTGKVG 182

Query: 185 DAKKLFGVMKAY 196
           DAKKLF V+K Y
Sbjct: 183 DAKKLFRVLKTY 190

[Close]

BLAST of PI0018361 vs. NCBI nr
Match: KAE8646284.1 (hypothetical protein Csa_016592 [Cucumis sativus])

HSP 1 Score: 279.3 bits (713), Expect = 3.2e-71
Identity = 145/197 (73.60%), Postives = 159/197 (80.71%), Query Frame = 0


Query: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQ 60
           MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNP  SSA+H  SLNVSPQNF   ISFQ
Sbjct: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQ 60

Query: 61  QQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYN 120
           QQLS+FLHNCKTGNI+ATQAFQFFH MM SNPTPPLSSFTHLLSGL KIKHYS VFYLYN
Sbjct: 61  QQLSMFLHNCKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYN 120

Query: 121 RMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRG 180
           +MRLSG+SPDCCTLNILL+CLCNVNRV E + +   +L+ G  PD+ TY  L+ GL    
Sbjct: 121 QMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEH 180

Query: 181 NVGDAKKLFGVMKAYEC 198
            +  A  LF  M+   C
Sbjct: 181 RISKAALLFTRMQKLGC 197

[Close]

BLAST of PI0018361 vs. NCBI nr
Match: XP_016901072.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X3 [Cucumis melo])

HSP 1 Score: 273.9 bits (699), Expect = 1.4e-69
Identity = 143/197 (72.59%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQ 60
           MASTSKTVPSASSIV+PNLSSSLFTHSP IPSSNPQ SS IHP SL+VSPQNF   IS Q
Sbjct: 1   MASTSKTVPSASSIVRPNLSSSLFTHSPIIPSSNPQFSSPIHPKSLHVSPQNFNTPISCQ 60

Query: 61  QQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYN 120
           QQLS+FLHNCKTGNI+ATQAF FFH MM SNPTPPLSSFTHLLSGLTKIKHYS VFYLYN
Sbjct: 61  QQLSMFLHNCKTGNITATQAFHFFHLMMCSNPTPPLSSFTHLLSGLTKIKHYSQVFYLYN 120

Query: 121 RMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRG 180
           +MRLSGLSPDCCTLNILL+CLCN+NRV E + +   +L+ G  PD+ TY  L+ GL    
Sbjct: 121 QMRLSGLSPDCCTLNILLNCLCNLNRVGEGLAVMAGILRRGYVPDIVTYTTLIKGLCMEH 180

Query: 181 NVGDAKKLFGVMKAYEC 198
            +  A  LF  M+   C
Sbjct: 181 RISKATLLFTRMQKLGC 197

[Close]

BLAST of PI0018361 vs. NCBI nr
Match: KAA0059626.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08159.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 273.9 bits (699), Expect = 1.4e-69
Identity = 143/197 (72.59%), Postives = 158/197 (80.20%), Query Frame = 0


Query: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQ 60
           MASTSKTVPSASSIV+PNLSSSLFTHSP IPSSNPQ SS IHP SL+VSPQNF   IS Q
Sbjct: 1   MASTSKTVPSASSIVRPNLSSSLFTHSPIIPSSNPQFSSPIHPKSLHVSPQNFNTPISCQ 60

Query: 61  QQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYN 120
           QQLS+FLHNCKTGNI+ATQAF FFH MM SNPTPPLSSFTHLLSGLTKIKHYS VFYLYN
Sbjct: 61  QQLSMFLHNCKTGNITATQAFHFFHLMMCSNPTPPLSSFTHLLSGLTKIKHYSQVFYLYN 120

Query: 121 RMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRG 180
           +MRLSGLSPDCCTLNILL+CLCN+NRV E + +   +L+ G  PD+ TY  L+ GL    
Sbjct: 121 QMRLSGLSPDCCTLNILLNCLCNLNRVGEGLAVMAGILRRGYVPDIVTYTTLIKGLCMEH 180

Query: 181 NVGDAKKLFGVMKAYEC 198
            +  A  LF  M+   C
Sbjct: 181 RISKATLLFTRMQKLGC 197

[Close]

BLAST of PI0018361 vs. NCBI nr
Match: XP_011659250.2 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 [Cucumis sativus] >KAE8646286.1 hypothetical protein Csa_016185 [Cucumis sativus])

HSP 1 Score: 184.5 bits (467), Expect = 1.1e-42
Identity = 106/197 (53.81%), Postives = 123/197 (62.44%), Query Frame = 0


Query: 1   MASTSKTVPSASSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQ 60
           MASTS TVPSASSI   NL SSLFTHS  IPS NPQI                       
Sbjct: 47  MASTSNTVPSASSIRNSNL-SSLFTHSSAIPSPNPQI----------------------- 106

Query: 61  QQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYN 120
              + FL +CKTGN++AT A  FFH MMRS PTP LSSF HLLSGL KIKHYS VF LYN
Sbjct: 107 ---AFFLRHCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYN 166

Query: 121 RMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRG 180
           +MRLSGLS D CTLNILL+CLCNVNR+ E    +  +L+ G  P++ TY  L+ GL    
Sbjct: 167 QMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEH 216

Query: 181 NVGDAKKLFGVMKAYEC 198
            + +A +LF  M+   C
Sbjct: 227 RISEATRLFLRMQKLGC 216

[Close]

BLAST of PI0018361 vs. NCBI nr
Match: XP_038896203.1 (pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida])

HSP 1 Score: 182.2 bits (461), Expect = 5.4e-42
Identity = 109/204 (53.43%), Postives = 132/204 (64.71%), Query Frame = 0


Query: 1   MASTSKTVPSASSIV----KPNLSSSLFTHSPTIPSSNPQISSAIHPISLN---VSPQNF 60
           ++  SKT+PSASS V    +P L SSLFTHSPTIPSS PQIS + HP S      SPQNF
Sbjct: 6   LSMASKTLPSASSTVSISSQPKL-SSLFTHSPTIPSSIPQISPSNHPKSPPQPLPSPQNF 65

Query: 61  ILSISFQQQLSVFLHNCKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYS 120
           I  IS Q +L  FL NC+ G I+AT+A  FF  M+RSNPTPP  SF  LL GL +IKHYS
Sbjct: 66  ITRISSQHRLPTFLQNCRIGKITATEALHFFDLMLRSNPTPPTYSFNLLLGGLAQIKHYS 125

Query: 121 HVFYLYNRMRLSGLSPDCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALL 180
            VF LYN+M L+GL P+  TLNIL++CLCNVNRV E       +L+ G  PD  TY  L+
Sbjct: 126 QVFSLYNKMCLAGLFPNFFTLNILINCLCNVNRVSEGFAAMAGILRRGYIPDKITYSTLI 185

Query: 181 IGLFQRGNVGDAKKLFGVMKAYEC 198
            GL     + +A +LF  M+   C
Sbjct: 186 KGLCMEYRISEATRLFMRMQKLGC 208

[Close]

BLAST of PI0018361 vs. TAIR 10
Match: AT5G16640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16
Identity = 40/110 (36.36%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 83  FFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSPDCCTLNILLDCLC 142
           FFH M++  P P ++ F+ LLS ++K+K Y  V YL+ +M++ G+  + CT NILL+C C
Sbjct: 69  FFH-MVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFC 128

Query: 143 NVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLFGVM 193
             +++  A+    +M+++G  P + T+G+LL G  +   V DA  +F  M
Sbjct: 129 RCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177

[Close]

BLAST of PI0018361 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.9e-15
Identity = 40/125 (32.00%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 70  CKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSP 129
           C+ G++   +A + FH+M      P   +FT L++G  K  H    F ++N M  +G SP
Sbjct: 397 CQIGDM--VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 456

Query: 130 DCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLF 189
           +  T   L+D LC    ++ A ++ +EM ++G +P++ TY +++ GL + GN+ +A KL 
Sbjct: 457 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 516

Query: 190 GVMKA 195
           G  +A
Sbjct: 517 GEFEA 519

[Close]

BLAST of PI0018361 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 79.0 bits (193), Expect = 5.9e-15
Identity = 40/125 (32.00%), Postives = 71/125 (56.80%), Query Frame = 0


Query: 70  CKTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSP 129
           C+ G++   +A + FH+M      P   +FT L++G  K  H    F ++N M  +G SP
Sbjct: 397 CQIGDM--VEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSP 456

Query: 130 DCCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLF 189
           +  T   L+D LC    ++ A ++ +EM ++G +P++ TY +++ GL + GN+ +A KL 
Sbjct: 457 NVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 516

Query: 190 GVMKA 195
           G  +A
Sbjct: 517 GEFEA 519

[Close]

BLAST of PI0018361 vs. TAIR 10
Match: AT1G62720.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 75.5 bits (184), Expect = 6.6e-14
Identity = 38/123 (30.89%), Postives = 67/123 (54.47%), Query Frame = 0


Query: 71  KTGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSPD 130
           K  +++  +    F +M++S P P +  F+ +LS + K K+Y  V  L++ M + G+  D
Sbjct: 44  KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103

Query: 131 CCTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLFG 190
             + NI+++CLC  +R   A+ +  +M++ G  PDV T  +L+ G  Q   V DA  L  
Sbjct: 104 LYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163

Query: 191 VMK 194
            M+
Sbjct: 164 KME 166

[Close]

BLAST of PI0018361 vs. TAIR 10
Match: AT3G16710.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 4.7e-12
Identity = 54/203 (26.60%), Postives = 97/203 (47.78%), Query Frame = 0


Query: 12  SSIVKPNLSSSLFTHSPTIPSSNPQISSAIHPISLNVSPQNFILSISFQQQLSVFLHNCK 71
           +SIVK      L +H   +  SNP+ ++++         + F    S+++ L   LH   
Sbjct: 10  ASIVK---GFHLHSHRHRLQISNPRTAASLSLCGFCFWIRAF---SSYRKILRNGLH--- 69

Query: 72  TGNISATQAFQFFHQMMRSNPTPPLSSFTHLLSGLTKIKHYSHVFYLYNRMRLSGLSPDC 131
             N+    A   F +M+ S P P +  FT LLS + K+  Y  V  L+ +M++ G+ P  
Sbjct: 70  --NLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLL 129

Query: 132 CTLNILLDCLCNVNRVEEAMKIYNEMLQVGKRPDVKTYGALLIGLFQRGNVGDAKKLFGV 191
           CT NI++ C+C  ++   A     +M+++G  PD+ T+ +LL G      + DA  LF  
Sbjct: 130 CTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQ 189

Query: 192 MKAYECLDLLPRRIIFISTLACM 215
           +     +   P  + + + + C+
Sbjct: 190 ILG---MGFKPNVVTYTTLIRCL 198

The following BLAST results are available for this feature:

BLAST of PI0018361 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMD3	1.5e-15	36.36	Pentatricopeptide repeat-containing protein At5g16640, mitochondrial OS=Arabidop...	[more]
Q0WVK7	8.4e-14	32.00	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9SI78	9.3e-13	30.89	Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana OX...	[more]
Q9SIC9	1.7e-11	34.68	Pentatricopeptide repeat-containing protein At2g31400, chloroplastic OS=Arabidop...	[more]
Q9LFC5	1.7e-11	32.56	Pentatricopeptide repeat-containing protein At5g01110 OS=Arabidopsis thaliana OX...	[more]

BLAST of PI0018361 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K5F6	3.9e-99	78.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G374710 PE=4 SV=1	[more]
A0A5D3CCW0	6.5e-70	72.59	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S4DYL3	6.5e-70	72.59	pentatricopeptide repeat-containing protein At1g63330-like isoform X3 OS=Cucumis...	[more]
A0A0A0K784	7.8e-55	66.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380110 PE=4 SV=1	[more]
A0A0A0K5M0	1.9e-53	65.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387770 PE=4 SV=1	[more]

BLAST of PI0018361 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646284.1	3.2e-71	73.60	hypothetical protein Csa_016592 [Cucumis sativus]	[more]
XP_016901072.1	1.4e-69	72.59	PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X3...	[more]
KAA0059626.1	1.4e-69	72.59	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK08159...	[more]
XP_011659250.2	1.1e-42	53.81	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1 ...	[more]
XP_038896203.1	5.4e-42	53.43	pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida]	[more]

BLAST of PI0018361 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16640.1	1.1e-16	36.36	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G05670.1	5.9e-15	32.00	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	5.9e-15	32.00	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G62720.1	6.6e-14	30.89	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT3G16710.1	4.7e-12	26.60	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 133..176 e-value: 3.1E-11 score: 43.3
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 168..197 e-value: 5.1E-4 score: 18.0 coord: 133..166 e-value: 1.4E-8 score: 32.4 coord: 98..131 e-value: 9.2E-6 score: 23.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 98..127 e-value: 0.12 score: 12.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 130..164 score: 11.553267
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 165..199 score: 8.560833
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 63..235 e-value: 2.8E-29 score: 104.5
None	No IPR available	PANTHER	PTHR45613:SF207	OS10G0495100 PROTEIN	coord: 70..192
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 142..194
None	No IPR available	PANTHER	PTHR45613:SF207	OS10G0495100 PROTEIN	coord: 142..194
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 70..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018361.1	PI0018361.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding