PI0018354 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCAATTCTCATCGGATGCTCTGTCTTTCACTCTAAAACGTCCCGTCGCCGCTCTTATTTCTTCCTTCCTTTCTAATGGAACCCTACGTTGACACCAGGAAGCGGCTACGGGAAGATTCCAACGATTCCCTCTTCAATTCCATCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATCCCGCCGACTCGAACTTCGATGCGCCGGTTTCACAATCGATCGATTCGTTTCAGTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGCGATTCAAGATCTCGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCAGTGCTGGTGCCTGTTGTTCAGCCTGAACTTGGATTTCTTCTAGAAGCGTCGGATGATGAATTAGGGCTTCCTCCTGCTGGTGAGAAAGAGCAAATTGAAGAAGCGCAGTTTTCAGGTAGCGGTGGTGTGAAAGGGATTTTAGGGTTTGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGAGAATTTGAGGTGTGAGATTAAAGAATGGAGTCCGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGTGGCGGAGTTGCCGACGGCGTATCGATCGGAGACGATGCCGTGTTTATAATAGTTAACTGAACACTGTATTATTTGTATTTGTATCCGTAAGTTGAAGAAACTAAAAACTTGGGGGAAAAAAGAAAAGAAAACTGAATGTGTGGAATTTGTTTAAGAAATTACAAGGGGTAACCC CCAATTCTCATCGGATGCTCTGTCTTTCACTCTAAAACGTCCCGTCGCCGCTCTTATTTCTTCCTTCCTTTCTAATGGAACCCTACGTTGACACCAGGAAGCGGCTACGGGAAGATTCCAACGATTCCCTCTTCAATTCCATCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATCCCGCCGACTCGAACTTCGATGCGCCGGTTTCACAATCGATCGATTCGTTTCAGTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGCGATTCAAGATCTCGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCAGTGCTGGTGCCTGTTGTTCAGCCTGAACTTGGATTTCTTCTAGAAGCGTCGGATGATGAATTAGGGCTTCCTCCTGCTGGTGAGAAAGAGCAAATTGAAGAAGCGCAGTTTTCAGGTAGCGGTGGTGTGAAAGGGATTTTAGGGTTTGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGAGAATTTGAGGTGTGAGATTAAAGAATGGAGTCCGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGTGGCGGAGTTGCCGACGGCGTATCGATCGGAGACGATGCCGTGTTTATAATAGTTAACTGAACACTGTATTATTTGTATTTGTATCCGTAAGTTGAAGAAACTAAAAACTTGGGGGAAAAAAGAAAAGAAAACTGAATGTGTGGAATTTGTTTAAGAAATTACAAGGGGTAACCC ATGGAACCCTACGTTGACACCAGGAAGCGGCTACGGGAAGATTCCAACGATTCCCTCTTCAATTCCATCGGATCCAACTCCAAGTTCCTCCGACTTGAAAATCCCGCCGACTCGAACTTCGATGCGCCGGTTTCACAATCGATCGATTCGTTTCAGTCGCATCACACAATTCAGGAAGACCTGCTGAAGATTCTAGACGATACCGACGCTTCCATAGATCGGGAGGCGGCGATTCAAGATCTCGATTCGGTGATTAGAAGCTTCGAGAAGGAAATTGAAGTGCCAGTGCTGGTGCCTGTTGTTCAGCCTGAACTTGGATTTCTTCTAGAAGCGTCGGATGATGAATTAGGGCTTCCTCCTGCTGGTGAGAAAGAGCAAATTGAAGAAGCGCAGTTTTCAGGTAGCGGTGGTGTGAAAGGGATTTTAGGGTTTGAGGATGAAATTGTTTCGAATTACTGTTGGTTTGAGAATTTGAGGTGTGAGATTAAAGAATGGAGTCCGGAAGAGGAAGAGGAGGTGGTGGCGTTGGGTGGATTGTTTGATCATACGGATGTGGTGGCGGAGTTGCCGACGGCGTATCGATCGGAGACGATGCCGTGTTTATAA MEPYVDTRKRLREDSNDSLFNSIGSNSKFLRLENPADSNFDAPVSQSIDSFQSHHTIQEDLLKILDDTDASIDREAAIQDLDSVIRSFEKEIEVPVLVPVVQPELGFLLEASDDELGLPPAGEKEQIEEAQFSGSGGVKGILGFEDEIVSNYCWFENLRCEIKEWSPEEEEEVVALGGLFDHTDVVAELPTAYRSETMPCL Homology
BLAST of PI0018354 vs. ExPASy TrEMBL
Match: A0A5D3DXI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00410 PE=4 SV=1) HSP 1 Score: 371.3 bits (952), Expect = 2.5e-99 Identity = 189/202 (93.56%), Postives = 195/202 (96.53%), Query Frame = 0
BLAST of PI0018354 vs. ExPASy TrEMBL
Match: A0A5A7UZW3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34725G00010 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98 Identity = 188/202 (93.07%), Postives = 194/202 (96.04%), Query Frame = 0
BLAST of PI0018354 vs. ExPASy TrEMBL
Match: A0A1S3BWV1 (uncharacterized protein LOC103494333 OS=Cucumis melo OX=3656 GN=LOC103494333 PE=4 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 1.3e-98 Identity = 188/202 (93.07%), Postives = 194/202 (96.04%), Query Frame = 0
BLAST of PI0018354 vs. ExPASy TrEMBL
Match: A0A0A0LS21 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G022530 PE=4 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 4.9e-95 Identity = 184/204 (90.20%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of PI0018354 vs. ExPASy TrEMBL
Match: A0A6J1E5H5 (uncharacterized protein LOC111429674 OS=Cucurbita moschata OX=3662 GN=LOC111429674 PE=4 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 3.7e-66 Identity = 148/211 (70.14%), Postives = 166/211 (78.67%), Query Frame = 0
BLAST of PI0018354 vs. NCBI nr
Match: TYK28413.1 (uncharacterized protein E5676_scaffold629G00410 [Cucumis melo var. makuwa]) HSP 1 Score: 371.3 bits (952), Expect = 5.2e-99 Identity = 189/202 (93.56%), Postives = 195/202 (96.53%), Query Frame = 0
BLAST of PI0018354 vs. NCBI nr
Match: XP_008453684.1 (PREDICTED: uncharacterized protein LOC103494333 [Cucumis melo]) HSP 1 Score: 369.0 bits (946), Expect = 2.6e-98 Identity = 188/202 (93.07%), Postives = 194/202 (96.04%), Query Frame = 0
BLAST of PI0018354 vs. NCBI nr
Match: KAA0059746.1 (uncharacterized protein E6C27_scaffold34725G00010 [Cucumis melo var. makuwa]) HSP 1 Score: 369.0 bits (946), Expect = 2.6e-98 Identity = 188/202 (93.07%), Postives = 194/202 (96.04%), Query Frame = 0
BLAST of PI0018354 vs. NCBI nr
Match: KGN63814.1 (hypothetical protein Csa_013978 [Cucumis sativus]) HSP 1 Score: 357.1 bits (915), Expect = 1.0e-94 Identity = 184/204 (90.20%), Postives = 190/204 (93.14%), Query Frame = 0
BLAST of PI0018354 vs. NCBI nr
Match: XP_038890344.1 (uncharacterized protein LOC120079943 [Benincasa hispida]) HSP 1 Score: 322.8 bits (826), Expect = 2.1e-84 Identity = 173/206 (83.98%), Postives = 182/206 (88.35%), Query Frame = 0
BLAST of PI0018354 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 8.8e-12 Identity = 62/187 (33.16%), Postives = 88/187 (47.06%), Query Frame = 0
BLAST of PI0018354 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 65.9 bits (159), Expect = 4.4e-11 Identity = 52/138 (37.68%), Postives = 67/138 (48.55%), Query Frame = 0
BLAST of PI0018354 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 65.9 bits (159), Expect = 4.4e-11 Identity = 52/138 (37.68%), Postives = 67/138 (48.55%), Query Frame = 0
BLAST of PI0018354 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 8.5e-07 Identity = 38/104 (36.54%), Postives = 51/104 (49.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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