PI0018352 (gene) Melon (PI 482460) v1

Overview


Name	PI0018352
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Methyltransferase-related protein
Location	chr02: 22283702 .. 22284589 (-)
RNA-Seq Expression	PI0018352
Synteny	PI0018352

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTTTATTTTTGCATATAATATTTAGCTTGTGGCATTGTGGGTTATCACTAACCATATCTTTAACTTTATCTGATTATTATTATTATTTGTCTTTGACATCCCTTTCATTTAATTATTCATAAGAAATGATAGAAAATGAGTGGTTAGGTTAGGTGGAAAACCAAGCAAACTCCAAATTCCCCAATTTTCTAAACCCAATTTTGACAATTCCTTCACTTCACTTCCCTTCCTTTGATTTTACCCTAAAATTCTCTCTCTTAATTCAGATCCAAAGGTTAGAGAAGAAGTAGAAGAAAAAAAAAAAAAAATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCCGACGATAACTCCAAGGAATTGGATTCCTCCGATTCGTCGTCCTGCTCAAAGGTTCTTGTAATTGTTCTTCATCAGAATCTTGCATTTTCTTTTTTATTTTTCTTTGTTTGTGTCTGAATGGAATGATTGTGGTGGTATGTTTGAACAGGTGTCTTCGGGGTTCTGGACGGTGGTGGACATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCGTCGTCGAAGAAGCCTTCCGATTGACGACACGATGTCTGACTTGCGAGTGTTCCGGCGGCCTAGGGCTCACCTTCTTCTGTTGTATGGATAATTATCTCTTTTTCCCTTTCCACCTTCGAGTAGATTTTGTAAAATTCCTCTTTTGCAATATCCAATATCGTCGTTAACATCTAAATCTGTATAATGTAATCAAAATACATGGTGATCGAACGTTTTGTGGATTCGATTTGTGATACAAAATTTTCTAATA

mRNA sequence

TTTGTTTATTTTTGCATATAATATTTAGCTTGTGGCATTGTGGGTTATCACTAACCATATCTTTAACTTTATCTGATTATTATTATTATTTGTCTTTGACATCCCTTTCATTTAATTATTCATAAGAAATGATAGAAAATGAGTGGTTAGGTTAGGTGGAAAACCAAGCAAACTCCAAATTCCCCAATTTTCTAAACCCAATTTTGACAATTCCTTCACTTCACTTCCCTTCCTTTGATTTTACCCTAAAATTCTCTCTCTTAATTCAGATCCAAAGGTTAGAGAAGAAGTAGAAGAAAAAAAAAAAAAAATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCCGACGATAACTCCAAGGAATTGGATTCCTCCGATTCGTCGTCCTGCTCAAAGGTGTCTTCGGGGTTCTGGACGGTGGTGGACATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCGTCGTCGAAGAAGCCTTCCGATTGACGACACGATGTCTGACTTGCGAGTGTTCCGGCGGCCTAGGGCTCACCTTCTTCTGTTGTATGGATAATTATCTCTTTTTCCCTTTCCACCTTCGAGTAGATTTTGTAAAATTCCTCTTTTGCAATATCCAATATCGTCGTTAACATCTAAATCTGTATAATGTAATCAAAATACATGGTGATCGAACGTTTTGTGGATTCGATTTGTGATACAAAATTTTCTAATA

Coding sequence (CDS)

ATGTGTCCGCTGAGATTTATTCTCATATTTCTCTCAGCGACGCTTGCCGGATTCTTCGTTCTCCGCAACCTCAAATCTCAGCCTCAAGATTTCGTGGCCGGCGATAATTCCGACGATAACTCCAAGGAATTGGATTCCTCCGATTCGTCGTCCTGCTCAAAGGTGTCTTCGGGGTTCTGGACGGTGGTGGACATGGCCAGCGGCCGCTACTTGTGGAGGCATTTGTTTCCGTCGTCGAAGAAGCCTTCCGATTGA

Protein sequence

MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSCSKVSSGFWTVVDMASGRYLWRHLFPSSKKPSD

Homology

[Close]

BLAST of PI0018352 vs. ExPASy TrEMBL
Match: A0A1S3BWD8 (uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.1e-37
Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSCSKVSSGFW 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDD+SKELDSSDS+SCSKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFPSSKKPSD 85
          TVVDMASGRYLWRHLFPSSKKPSD
Sbjct: 61 TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of PI0018352 vs. ExPASy TrEMBL
Match: A0A0A0LV42 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.3e-37
Identity = 81/84 (96.43%), Postives = 82/84 (97.62%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSCSKVSSGFW 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNS E DSSDSSSCSKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSNEFDSSDSSSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFPSSKKPSD 85
          T+VDMASGRYLWRHLFPSSKKPSD
Sbjct: 61 TLVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of PI0018352 vs. ExPASy TrEMBL
Match: A0A6J1KER9 (uncharacterized protein LOC111492605 OS=Cucurbita maxima OX=3661 GN=LOC111492605 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-26
Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSS--CSKVSSG 60
           MCPLRFILIFLSATLAGFFVLRNLKSQPQDF A +NSD +S +L S+ +SS   S + SG
Sbjct: 68  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADENSDAHSNDLSSNSTSSKVTSAMQSG 127

Query: 61  FWTVVDMASGRYLWRHLFPSSKKPSD 85
           FWTVVDMASGRYLWRHLFPSS+K SD
Sbjct: 128 FWTVVDMASGRYLWRHLFPSSQKRSD 153

[Close]

BLAST of PI0018352 vs. ExPASy TrEMBL
Match: A0A6J1DPZ0 (uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022014 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 68/84 (80.95%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDF-VAGDNSDDNSKELDSSDSS-SCSKVSSG 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDF  A DNSD +S +  ++ SS S SKVSSG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEAADDNSDAHSNDSSAAHSSNSTSKVSSG 60

Query: 61 FWTVVDMASGRYLWRHLFPSSKKP 83
          FWTVVDMASGRYLWRHLFPSS  P
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSSSP 84

[Close]

BLAST of PI0018352 vs. ExPASy TrEMBL
Match: A0A6J1GAZ0 (uncharacterized protein LOC111452533 OS=Cucurbita moschata OX=3662 GN=LOC111452533 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.0e-25
Identity = 66/86 (76.74%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSS--CSKVSSG 60
          MCPLRFILIFLSATLAGFFVLRN+KSQPQDF A DNSD +S +L S+ +SS   S + SG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNIKSQPQDFEAEDNSDAHSNDLSSNSTSSKVTSAMQSG 60

Query: 61 FWTVVDMASGRYLWRHLFPSSKKPSD 85
          FWTVVDMASGRYLWR+LFPSS+K SD
Sbjct: 61 FWTVVDMASGRYLWRNLFPSSQKRSD 86

[Close]

BLAST of PI0018352 vs. NCBI nr
Match: XP_008453499.1 (PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 2.4e-37
Identity = 82/84 (97.62%), Postives = 84/84 (100.00%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSCSKVSSGFW 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDD+SKELDSSDS+SCSKVSSGFW
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDSSKELDSSDSTSCSKVSSGFW 60

Query: 61 TVVDMASGRYLWRHLFPSSKKPSD 85
          TVVDMASGRYLWRHLFPSSKKPSD
Sbjct: 61 TVVDMASGRYLWRHLFPSSKKPSD 84

[Close]

BLAST of PI0018352 vs. NCBI nr
Match: XP_038879201.1 (uncharacterized protein LOC120071167 [Benincasa hispida])

HSP 1 Score: 137.1 bits (344), Expect = 6.9e-29
Identity = 76/112 (67.86%), Postives = 79/112 (70.54%), Query Frame = 0


Query: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSC-------- 60
           MCPLRFILIFLSATLAGFF+LRNLKS PQDFVAGDNSDDNSKEL+S  SSS         
Sbjct: 1   MCPLRFILIFLSATLAGFFLLRNLKSPPQDFVAGDNSDDNSKELNSDSSSSSEVLVIVLH 60

Query: 61  --------------------SKVSSGFWTVVDMASGRYLWRHLFPSSKKPSD 85
                                +VSSGFWTVVDMASGRYLWRHLFPSSKKPSD
Sbjct: 61  RNLAFPFSLFVSEWNDCGMFEQVSSGFWTVVDMASGRYLWRHLFPSSKKPSD 112

[Close]

BLAST of PI0018352 vs. NCBI nr
Match: XP_038895770.1 (uncharacterized protein LOC120083933 [Benincasa hispida])

HSP 1 Score: 134.8 bits (338), Expect = 3.4e-28
Identity = 71/85 (83.53%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDS-SDSSSCSKVSSGF 60
          MCPLRFILIFLSATLAGFF+LRNLKS  QDF A DNSD +SK+LDS S SSS SK+SSGF
Sbjct: 1  MCPLRFILIFLSATLAGFFLLRNLKSPSQDFQADDNSDSHSKDLDSNSSSSSSSKLSSGF 60

Query: 61 WTVVDMASGRYLWRHLFPSSKKPSD 85
          WTVVDMASGRYLWRHLF SS+KPSD
Sbjct: 61 WTVVDMASGRYLWRHLFSSSEKPSD 85

[Close]

BLAST of PI0018352 vs. NCBI nr
Match: XP_023525661.1 (uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-26
Identity = 68/86 (79.07%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSS--CSKVSSG 60
          MCPLRFILIFLSATLAGFFVLRNLKSQPQDF A DNSD +S +L S+ +SS   S + SG
Sbjct: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADDNSDAHSNDLSSNSTSSKVTSAMQSG 60

Query: 61 FWTVVDMASGRYLWRHLFPSSKKPSD 85
          FWTVVDMASGRYLWRHLFPSS+K SD
Sbjct: 61 FWTVVDMASGRYLWRHLFPSSQKRSD 86

[Close]

BLAST of PI0018352 vs. NCBI nr
Match: XP_022997733.1 (uncharacterized protein LOC111492605 [Cucurbita maxima])

HSP 1 Score: 127.9 bits (320), Expect = 4.2e-26
Identity = 67/86 (77.91%), Postives = 74/86 (86.05%), Query Frame = 0


Query: 1   MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSS--CSKVSSG 60
           MCPLRFILIFLSATLAGFFVLRNLKSQPQDF A +NSD +S +L S+ +SS   S + SG
Sbjct: 68  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFEADENSDAHSNDLSSNSTSSKVTSAMQSG 127

Query: 61  FWTVVDMASGRYLWRHLFPSSKKPSD 85
           FWTVVDMASGRYLWRHLFPSS+K SD
Sbjct: 128 FWTVVDMASGRYLWRHLFPSSQKRSD 153

[Close]

BLAST of PI0018352 vs. TAIR 10
Match: AT5G58375.1 (Methyltransferase-related protein )

HSP 1 Score: 80.1 bits (196), Expect = 9.3e-16
Identity = 48/87 (55.17%), Postives = 58/87 (66.67%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSCSKV----S 60
          MCPLR ILIFLSATLAGFFVL+ L S   D +  D+S  +++  D    S  SKV     
Sbjct: 1  MCPLRLILIFLSATLAGFFVLQKLNSTSDDPL--DDSFTDAEHADDDSVSGFSKVGMAMK 60

Query: 61 SGFWTVVDMASGRYLWRHLFPSSKKPS 84
          SGFWT VDMASGRYLW +L  ++K+ S
Sbjct: 61 SGFWTCVDMASGRYLWNNLCSNAKRSS 85

[Close]

BLAST of PI0018352 vs. TAIR 10
Match: AT5G18150.1 (Methyltransferase-related protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.3e-11
Identity = 34/76 (44.74%), Postives = 47/76 (61.84%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSC-SKVSSGF 60
          MCP+RF+L+F SA LAG+F  + + S P+         D+  EL+     +   K+ +GF
Sbjct: 1  MCPMRFLLVFFSAVLAGYFAWKTVSSSPE--------FDSPDELNEKQELNLKKKMENGF 60

Query: 61 WTVVDMASGRYLWRHL 76
          W  VDMASGRYLWR+L
Sbjct: 61 WVFVDMASGRYLWRNL 68

[Close]

BLAST of PI0018352 vs. TAIR 10
Match: AT5G14602.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: Methyltransferase-related protein (TAIR:AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 6.9e-11
Identity = 36/75 (48.00%), Postives = 47/75 (62.67%), Query Frame = 0


Query: 1  MCPLRFILIFLSATLAGFFVLRNLKSQPQDFVAGDNSDDNSKELDSSDSSSCSKVSSGFW 60
          MCPLRF+L+F SA LAG+   R + S P+ F + +     +KE    D     K+ +G W
Sbjct: 1  MCPLRFVLVFFSAVLAGYIAWRTVNSTPELF-SDELLQAEAKEKQGLDFK--RKMDNGLW 60

Query: 61 TVVDMASGRYLWRHL 76
          T VDMASGRYLWR+L
Sbjct: 61 TFVDMASGRYLWRNL 72

The following BLAST results are available for this feature:

BLAST of PI0018352 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018352 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BWD8	1.1e-37	97.62	uncharacterized protein LOC103494193 OS=Cucumis melo OX=3656 GN=LOC103494193 PE=...	[more]
A0A0A0LV42	3.3e-37	96.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G025180 PE=4 SV=1	[more]
A0A6J1KER9	2.0e-26	77.91	uncharacterized protein LOC111492605 OS=Cucurbita maxima OX=3661 GN=LOC111492605...	[more]
A0A6J1DPZ0	1.0e-25	80.95	uncharacterized protein LOC111022014 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A6J1GAZ0	1.0e-25	76.74	uncharacterized protein LOC111452533 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]

BLAST of PI0018352 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008453499.1	2.4e-37	97.62	PREDICTED: uncharacterized protein LOC103494193 [Cucumis melo]	[more]
XP_038879201.1	6.9e-29	67.86	uncharacterized protein LOC120071167 [Benincasa hispida]	[more]
XP_038895770.1	3.4e-28	83.53	uncharacterized protein LOC120083933 [Benincasa hispida]	[more]
XP_023525661.1	1.4e-26	79.07	uncharacterized protein LOC111789199 [Cucurbita pepo subsp. pepo]	[more]
XP_022997733.1	4.2e-26	77.91	uncharacterized protein LOC111492605 [Cucurbita maxima]	[more]

BLAST of PI0018352 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58375.1	9.3e-16	55.17	Methyltransferase-related protein	[more]
AT5G18150.1	5.3e-11	44.74	Methyltransferase-related protein	[more]
AT5G14602.1	6.9e-11	48.00	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..55
None	No IPR available	PANTHER	PTHR34132	EMB\|CAB87627.1-RELATED	coord: 1..83
None	No IPR available	PANTHER	PTHR34132:SF4	EXPRESSED PROTEIN	coord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018352.1	PI0018352.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity