PI0018244 (gene) Melon (PI 482460) v1

Overview


Name	PI0018244
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Caspase-6 protein
Location	chr06: 10685829 .. 10689555 (+)
RNA-Seq Expression	PI0018244
Synteny	PI0018244

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGGCGCTCATCTGGATCTTTATCTCGCTCCCTCATTTCCTCCGTTAGGGCTTCTTCTCTCCGATCAACTCCTTCTCTTCCTCGCCTCCGCCCCCCACCTCTCCCCTCTCGTCCTGGCCTTCAATCTCGTCGCTTTTCTTTTTCTCCTTCCAGGTACTTCTCAAAGTTTCTAAATTACCTTTTCATCAATAAAAGTTTCTAAATTATCTGTTTGATTTCTGTGGTCAAATGAATGAATTTCTGAGGAAGAAATGCAGTTGAATTTTGACCATATATTTGGATGCTAGATGCTTGTTTCTGTTGCCGCCTTCAAATCACGATCTTTGTCGCTTGTAATTTTCCACATTACGTTATTGTAACAAAATTTCAGACTGTCAGTTGATGGTATTCATTTTAAATATCTATAAATAACCTGACATATTACAGTGCTTACTTTTCACTAATGTCGGGGATGTCTGGTAAACTTTAGATAATTAAAAGGCGAGACACTGATGAAGTTTTTAGATGTATAGGAACTAGCTCAAAATCAATTTACCCATATATTACTGATGGAAGACAACACTTCAAGAGCTTGCTGAAAGGAGGTTAATGTAGGAAGGAGTGTAGGTGTAGTTGCGAACATTTGGAAGTGGCCACTCACTCTAGCTTCACCCAACTGCCATTGATCATTTTTTGCTTTGGGGCCACCCCTTACTCTACCGTTATTATAGGGGTGTGGTGTTCATGAAAAAGAAATATCTCGAGGACGAGAACCGCATGACACTGTAAAATTTATCTTTGACCAACGCCCACTGGTTTTAAATATACCAAAGAAGGAAGAAACGAAAAAGACGTCATATTGACAGATGAACTGGTGAAGAAAGGTTGCTTCTTTCTCAAAGCATGTGAGAACTCAAGAATTCGAGCCCTAGCTTTTGTTTTTTCATGGTTAGTTTCCAATGTCACATGTAGTATATTTTCTCCTAACAACTTTGCGCCATACACAATCGGCTGTGTATCTCCAAAGCCAGTTAATATCATTTTTTGTTGCCATGTTATCATTCAAATACTTGAAAAGAAGGAAACCAATCTTCCAGTTTATGAGATGGCACCCTCAATCTTAGTTTACCTCTTCCTGAAGAAGAAAATCTTTAAAGGGCTTTTATATATCTGTAGCTACATTTTCTGGATCTTTGAAAACTGAGAGGAAGTACGTGAGATTTTCCTCCCTGCCTTCTTTGCTGGGATGGGAACATTGGAACAATATAGAGATCAAGGGATCGTAACCACACTAGTTGATTGACGATGATCTTCCCAGCCTAATTCCTTTCAATCAGTAGTAGCTTTATTTATCTCCCCTTCCAAATTACTAACTACATTTTGGCTTTGAAGCAAACTCTCTGCTTTCTTCTGGTAGACCCTGCCAATTCTAACATCTGTTTCCCAACTACCAGGGGATATCACCACCACTTTATATGCTTTTCAAGTTTGACTCATTTCGAGGTAGTTAAGTTACATCCCCTTTTTCTTTTTTAAAAAAATATTAGTATGAAAACATCAACTTTCATTGAAAAAAAATAAAAGAAGGGATGTACAAAAAACCAAGCCCACAAAATGAGGGGACTACCTTTACAAGAAAGGACTTCAACTATGTGAAATTGTTCTGTAGAATAATTACCAATTTTCTGAGTATCATGTTGCACCAGCTTGGTTTTCTTCGTTGTAGATGAGAAACCATTACCTTCTATCAATACGGTAGACTTGAGCACCTCCATCGTGCCTTCTGTGGCCCACCAAAGAAGGTTTCATTGACCACATTATTCATTACAAGAGAAAGATACAGCCATTTTTTTAATTGAATGTATGTAATGTAACCTTAACAACTTCAGAATTTTCGGAGAATTACTTTTCAGGTATACTCAGCCTGTCAGGTTTCTTATTACCTTATGGCCTTCTCAACCATGCTGAAATCAAAGGTTTTTAATCACATGAAAGTGAACCCCAGAAACATTTCCATTATACTCTAGTCTCTACCATCTCTTAATTGATTTTTTTTTATTTACATTATTACTTATTATCTTCTCTCTCTTGATCAACTTTCATTGGTTGGCTTTTTTTTGCGGTCCTTCCTTTTGGGAAAAGGGGTTTCCTCTTCGCTGGCTCTAGGATGCCCTCTTTTCACTCTCTTGTTTTTAATACAGTTTCTGGGTTAAAAAATCTTTGTAATATTCTCTCTCTGGTGCTTGAATGCAAATTTCTGGATTTCTCACGAGTTAGACTTAGAGCCATGATTTAACCCTTTTTGTTTCAAAATGTCCTTTACAGGAACCTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCTGGGTACTACCTGCTTGACATCCCACCTATGTGTTAGCGTGCGGGCTTTTTGCGAGCTGTCTCATGGTACCTTCTACCGTACTTGTCAGGATCGCTAGTATCCTCTTTGTGAGTCTTGTTACAGGAAACGTGAAAAACATAATAGTAAATGTTTCTTGATAAGGTCATTATTGTGTGTGATCATCTTTTATAATGATGGTATCATAACATCTCAGTGAGATTTTGTGTTTGGATGATATGATGTGGCATAGATTAGGAATTTTTTTTTACCGTCAAAATGTCATTAATAAGAAGAAATTGGGATTGGGATTGATAGGAAGGAATGGAAAAGATGGGTGATGCACGAGGACATTCTATCGTTCGAAAGCGGGAGACTGTCGCAACATTTGTAGGTCCCCCTTTTTTGGCTTTTTTTTATTCATTTCCATTTTGTAGTATTTTTTTGTGGACTTTTCTAAACTTCATTAAGAAAAAATATCTGAAGTAGTGCTGGTGATGGTGAAGATATGCTGTTGAGGTGGGTGAGAAAGAAGGAGGTACATCTATGGGAAGAGAGAAAGAGGATGTTCAATCCTGTTTAATGAATTAACTTCCTTTATTTGTTAATGGTGAAGGTGGGGAATTACTGAGGCGTGATATTAGTGAGTTATATTGCCCGCTCACTTAAATTATTTGAGAAAAAATGTAATTGAGATTGATGAGGGCATACTTATCGAGGATGGTGTTAGAAACTTAAAAGCTTCTGCCATGATAAACGATACTTCATCTTAATCATACATTACTTCCCTGGAAAATCTGTGCTATACTGTTAAGCTGGACATAAGTACAATACTAGAAGGCTGAGAAGGTTGATAACTTGTTTACACACTCTGTTCATTATTGGATCCCGTAAGTTGAATTGAAAATAATATAACCTTCTCCTCTTCATAGTGTAAATCTTACACAAATATTATCCATTGTTCTTTGTGATTATACCATGAAGTTTGATGCTTTCCTCCGTCTTTTTATTATTATATTAATCTTTTCTTGGTACGCTTATAGCTATTCCCTTTCTTCCCTTATAGGCTTTCCTGGATTAGGGAACTTTGGTTTTAAATTTTGTCGGATCTTGTAGCAGTCATTTTTAATTAATGGTATTGGTAGTCTGTGACAAACACAAAATATGAATGAAACAAGGCATTCATTAGAAATGAAACTGTAGAGCAGAACAATTTGTGCTGTTGATATTTTTATGATGCACTTTCAGAGTCATGAAGCATTTCATCATTGAACAAAAACACTTTAATTACAAAAAAAGCAAATAAAATTGTAAGATGTCCGCGTGTTATCAAATTCTTATGCTTTTCCCTTTTGTTTTACATTGTAGGTACTTGA

mRNA sequence

ATGGCTTGGCGCTCATCTGGATCTTTATCTCGCTCCCTCATTTCCTCCGTTAGGGCTTCTTCTCTCCGATCAACTCCTTCTCTTCCTCGCCTCCGCCCCCCACCTCTCCCCTCTCGTCCTGGCCTTCAATCTCGTCGCTTTTCTTTTTCTCCTTCCAGGAACCTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCTGGGTACTACCTGCTTGACATCCCACCTATGTGTTAGCGTGCGGGCTTTTTGCGAGCTGTCTCATGGTACTTGA

Coding sequence (CDS)

ATGGCTTGGCGCTCATCTGGATCTTTATCTCGCTCCCTCATTTCCTCCGTTAGGGCTTCTTCTCTCCGATCAACTCCTTCTCTTCCTCGCCTCCGCCCCCCACCTCTCCCCTCTCGTCCTGGCCTTCAATCTCGTCGCTTTTCTTTTTCTCCTTCCAGGAACCTGGGAGAACTGGGATGCACACAGTCTCTTCTGCCCATGCTGGGTACTACCTGCTTGACATCCCACCTATGTGTTAGCGTGCGGGCTTTTTGCGAGCTGTCTCATGGTACTTGA

Protein sequence

MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGCTQSLLPMLGTTCLTSHLCVSVRAFCELSHGT

Homology

[Close]

BLAST of PI0018244 vs. ExPASy TrEMBL
Match: A0A0A0LBV2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199040 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 5.0e-39
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1   MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
           MAWRSSGSLSRSLIS++R SSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC
Sbjct: 57  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 116

Query: 61  TQSLLPMLGTTCLTSHLCVSVRAFCELSHGT 92
           T SLLPMLGTTCLTSHLCV VRAFCELSHGT
Sbjct: 117 THSLLPMLGTTCLTSHLCVDVRAFCELSHGT 147

[Close]

BLAST of PI0018244 vs. ExPASy TrEMBL
Match: A0A6J1J270 (uncharacterized protein LOC111482036 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482036 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32
Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
          MAWR SGSLSRSLIS+VRASSLRS PSLPRLRPPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPM--LGTTCLTSHLCVSVRAFCELSHGT 92
          TQSLL M  +G TCLTSHLCVSVRAFCELSHGT
Sbjct: 61 TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGT 93

[Close]

BLAST of PI0018244 vs. ExPASy TrEMBL
Match: A0A6J1IZB9 (uncharacterized protein LOC111482036 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111482036 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32
Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
          MAWR SGSLSRSLIS+VRASSLRS PSLPRLRPPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPM--LGTTCLTSHLCVSVRAFCELSHGT 92
          TQSLL M  +G TCLTSHLCVSVRAFCELSHGT
Sbjct: 61 TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGT 93

[Close]

BLAST of PI0018244 vs. ExPASy TrEMBL
Match: A0A6J1FMT0 (uncharacterized protein LOC111446884 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111446884 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.6e-32
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
          MAWR SGSLSRSLIS+VRASSLRS PSLPRL PPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLHPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPM--LGTTCLTSHLCVSVRAFCELSHGT 92
          TQSLL M  +G TCLTSHLCVSVRAFCELSHGT
Sbjct: 61 TQSLLSMHIVGATCLTSHLCVSVRAFCELSHGT 93

[Close]

BLAST of PI0018244 vs. ExPASy TrEMBL
Match: A0A6J1J5V3 (uncharacterized protein LOC111482036 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482036 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 4.6e-32
Identity = 79/92 (85.87%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
          MAWR SGSLSRSLIS+VRASSLRS PSLPRLRPPPL +RP LQSRR SFS SRNLGELGC
Sbjct: 1  MAWRPSGSLSRSLISTVRASSLRSAPSLPRLRPPPLAARPRLQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPM--LGTTCLTSHLCVSVRAFCELSHG 91
          TQSLL M  +G TCLTSHLCVSVRAFCELSHG
Sbjct: 61 TQSLLSMHIVGATCLTSHLCVSVRAFCELSHG 92

[Close]

BLAST of PI0018244 vs. NCBI nr
Match: XP_004140720.1 (uncharacterized protein LOC101202763 isoform X1 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 1.0e-38
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1   MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
           MAWRSSGSLSRSLIS++R SSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC
Sbjct: 50  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 109

Query: 61  TQSLLPMLGTTCLTSHLCVSVRAFCELSHGT 92
           T SLLPMLGTTCLTSHLCV VRAFCELSHGT
Sbjct: 110 THSLLPMLGTTCLTSHLCVDVRAFCELSHGT 140

[Close]

BLAST of PI0018244 vs. NCBI nr
Match: KAE8650495.1 (hypothetical protein Csa_009775 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 1.0e-38
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1   MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
           MAWRSSGSLSRSLIS++R SSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC
Sbjct: 57  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 116

Query: 61  TQSLLPMLGTTCLTSHLCVSVRAFCELSHGT 92
           T SLLPMLGTTCLTSHLCV VRAFCELSHGT
Sbjct: 117 THSLLPMLGTTCLTSHLCVDVRAFCELSHGT 147

[Close]

BLAST of PI0018244 vs. NCBI nr
Match: XP_004140722.1 (uncharacterized protein LOC101202763 isoform X3 [Cucumis sativus])

HSP 1 Score: 169.9 bits (429), Expect = 1.0e-38
Identity = 86/91 (94.51%), Postives = 88/91 (96.70%), Query Frame = 0


Query: 1   MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
           MAWRSSGSLSRSLIS++R SSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC
Sbjct: 50  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 109

Query: 61  TQSLLPMLGTTCLTSHLCVSVRAFCELSHGT 92
           T SLLPMLGTTCLTSHLCV VRAFCELSHGT
Sbjct: 110 THSLLPMLGTTCLTSHLCVDVRAFCELSHGT 140

[Close]

BLAST of PI0018244 vs. NCBI nr
Match: XP_004140721.1 (uncharacterized protein LOC101202763 isoform X2 [Cucumis sativus])

HSP 1 Score: 167.9 bits (424), Expect = 4.0e-38
Identity = 85/90 (94.44%), Postives = 87/90 (96.67%), Query Frame = 0


Query: 1   MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
           MAWRSSGSLSRSLIS++R SSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC
Sbjct: 50  MAWRSSGSLSRSLISTLRPSSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 109

Query: 61  TQSLLPMLGTTCLTSHLCVSVRAFCELSHG 91
           T SLLPMLGTTCLTSHLCV VRAFCELSHG
Sbjct: 110 THSLLPMLGTTCLTSHLCVDVRAFCELSHG 139

[Close]

BLAST of PI0018244 vs. NCBI nr
Match: XP_038883151.1 (uncharacterized protein LOC120074027 isoform X3 [Benincasa hispida])

HSP 1 Score: 150.6 bits (379), Expect = 6.5e-33
Identity = 81/94 (86.17%), Postives = 83/94 (88.30%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLISSVRASSLRSTPSLPRLRPPPLPSRPGLQSRRFSFSPSRNLGELGC 60
          MAWRSSGSLSRSLISSVRASSLRS PSLPRLRPPPL +RP  QSRR SFS SRNLGELGC
Sbjct: 1  MAWRSSGSLSRSLISSVRASSLRSAPSLPRLRPPPLAARPRPQSRRLSFSTSRNLGELGC 60

Query: 61 TQSLLPM---LGTTCLTSHLCVSVRAFCELSHGT 92
          TQSLLPM   +G TCLTSHLCVS RAFCELSHGT
Sbjct: 61 TQSLLPMHSIMGATCLTSHLCVSARAFCELSHGT 94

[Close]

BLAST of PI0018244 vs. TAIR 10
Match: AT2G15000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 70 Blast hits to 70 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLIS-SVRASSLRS-TPSLPRLRPPPLPSRPGLQSRRFSF-SPSRNLGE 60
          MAWR++GS +RS +S + R+ SLRS T +LPRLRPP    +  L SRRF+F SPSRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPM---LGTTCLTSHLCVSVRAFCELSHGT 92
          LGCTQS LP+   + T+ LTSHL V++RAFCELS+GT
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

[Close]

BLAST of PI0018244 vs. TAIR 10
Match: AT2G15000.4 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLIS-SVRASSLRS-TPSLPRLRPPPLPSRPGLQSRRFSF-SPSRNLGE 60
          MAWR++GS +RS +S + R+ SLRS T +LPRLRPP    +  L SRRF+F SPSRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPM---LGTTCLTSHLCVSVRAFCELSHGT 92
          LGCTQS LP+   + T+ LTSHL V++RAFCELS+GT
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

[Close]

BLAST of PI0018244 vs. TAIR 10
Match: AT2G15000.5 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.2); Has 80 Blast hits to 80 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 80; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.8 bits (229), Expect = 1.5e-19
Identity = 59/97 (60.82%), Postives = 74/97 (76.29%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLIS-SVRASSLRS-TPSLPRLRPPPLPSRPGLQSRRFSF-SPSRNLGE 60
          MAWR++GS +RS +S + R+ SLRS T +LPRLRPP    +  L SRRF+F SPSRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPM---LGTTCLTSHLCVSVRAFCELSHGT 92
          LGCTQS LP+   + T+ LTSHL V++RAFCELS+GT
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNGT 93

[Close]

BLAST of PI0018244 vs. TAIR 10
Match: AT2G15000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 5.7e-19
Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLIS-SVRASSLRS-TPSLPRLRPPPLPSRPGLQSRRFSF-SPSRNLGE 60
          MAWR++GS +RS +S + R+ SLRS T +LPRLRPP    +  L SRRF+F SPSRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPM---LGTTCLTSHLCVSVRAFCELSHG 91
          LGCTQS LP+   + T+ LTSHL V++RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

[Close]

BLAST of PI0018244 vs. TAIR 10
Match: AT2G15000.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34265.1); Has 70 Blast hits to 70 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 90.9 bits (224), Expect = 5.7e-19
Identity = 58/96 (60.42%), Postives = 73/96 (76.04%), Query Frame = 0


Query: 1  MAWRSSGSLSRSLIS-SVRASSLRS-TPSLPRLRPPPLPSRPGLQSRRFSF-SPSRNLGE 60
          MAWR++GS +RS +S + R+ SLRS T +LPRLRPP    +  L SRRF+F SPSRNLG 
Sbjct: 1  MAWRNAGSAARSFVSATARSPSLRSPTTALPRLRPP----QSSLPSRRFTFSSPSRNLGA 60

Query: 61 LGCTQSLLPM---LGTTCLTSHLCVSVRAFCELSHG 91
          LGCTQS LP+   + T+ LTSHL V++RAFCELS+G
Sbjct: 61 LGCTQSFLPLYSVVATSQLTSHLNVNLRAFCELSNG 92

The following BLAST results are available for this feature:

BLAST of PI0018244 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018244 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LBV2	5.0e-39	94.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G199040 PE=4 SV=1	[more]
A0A6J1J270	1.2e-32	86.02	uncharacterized protein LOC111482036 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1IZB9	1.2e-32	86.02	uncharacterized protein LOC111482036 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1FMT0	4.6e-32	84.95	uncharacterized protein LOC111446884 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1J5V3	4.6e-32	85.87	uncharacterized protein LOC111482036 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of PI0018244 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140720.1	1.0e-38	94.51	uncharacterized protein LOC101202763 isoform X1 [Cucumis sativus]	[more]
KAE8650495.1	1.0e-38	94.51	hypothetical protein Csa_009775 [Cucumis sativus]	[more]
XP_004140722.1	1.0e-38	94.51	uncharacterized protein LOC101202763 isoform X3 [Cucumis sativus]	[more]
XP_004140721.1	4.0e-38	94.44	uncharacterized protein LOC101202763 isoform X2 [Cucumis sativus]	[more]
XP_038883151.1	6.5e-33	86.17	uncharacterized protein LOC120074027 isoform X3 [Benincasa hispida]	[more]

BLAST of PI0018244 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15000.1	1.5e-19	60.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.4	1.5e-19	60.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.5	1.5e-19	60.82	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.2	5.7e-19	60.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G15000.3	5.7e-19	60.42	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..52
None	No IPR available	PANTHER	PTHR33156:SF26	OS12G0592200 PROTEIN	coord: 1..90
IPR043459	NFD6/NOXY2-like	PANTHER	PTHR33156	OS02G0230000 PROTEIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018244.1	PI0018244.1	mRNA