PI0018221 (gene) Melon (PI 482460) v1

Overview


Name	PI0018221
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	thylakoid lumenal 15 kDa protein 1, chloroplastic
Location	chr03: 25234418 .. 25236764 (-)
RNA-Seq Expression	PI0018221
Synteny	PI0018221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCAATTAGAGAAAAGTAGTAGTCTTCCGGTATTACCACGTGGCAGAATCTACGTTGACAGAGGACCGTAAGTAAGATACGAACAGCTGCACACAAACAAAACTCATAATCCATTTCCAGATTATCCAATGCGGTTGCGGTTGGTGACATTATCCAATTCGAAAACGAAAACAATTTTTTGAATTTCAGCTTTCCGGAAATGGCTCTGCTCAACGCTTCATTATGTTGTTCCACTCCCAAAATTCCTTCAAGATCTCACCTTCTTCTTCCTCCCTCCATTTCCCCCCATTCTACTTCTCAGGTAAACTCTGCCCCTCCATTTCCACTCCCATTTTCTTCTCCTTTCTCTTCAAATGCTTTGATTTTACCCACAATATGAAGGTATTCAACCAACAACTTGAAGCTACACGGAATTTGGTTCTTTCCCTTGGACAGCCCACTTTCCTCGCTTTCATTTCTGCCTCTTTGTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGTTTATTTCCTCATTTTAATTCTCATTTCTCCTATGTATTACATTCTATTCTGTACTGTATGATTGATTTTTGGTAATTAGGGCGGAGGTCCTTACGGAGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACCTTAATCAAGCAAGATTTCAAAACGGTTTCAACCGAAGTTTCATTATTTCTATTGTTTGTACTTGTACTACAGTAATATGTGGTTTTGACATTGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCGTTTCTTTTTATTAGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCCAAGTTATTAGGTGCTAGCTTCTTCGATGCTGATTTAACAGGTTTAACTCATTTTATCAACTGCATACTCATATATTCAGGATTTTCTATCCAGTTAATGCCGACTTCAATTCTTTCTTTCTTTCTTTGTCTAATTGTTAGGGGCGGATCTGTCAGATGCTGATCTCAGAGGTGCAGATTTTTCTCTTGCCAATGTTACCAAGGTGCTGATTGTTTGATACGTGTACAATTAAATGCCTCTTTATTTAATCTCTAGTTTCCCCTTTTCAGATTTTCAAATTTGAATGATTATATTATATATACATATGTACATAACAAGTTAGTTAGGACTGGAGGTCAAATTTTGCAATCTTAGTCTTGAATGTTAAAAAATTTGATCAAATACGATAGGAAACTACTTTGCAAAAAGTATTCATGTGATACAATAACCATGAACTGTGTTTGCAGTTTGAGATGCAGAGTAACCTACAGTTTTTATCTGAGATTTTACATTCAAGTGCTGTGCTTTGATGTTAGAATACAGTGAAGTTATAACTTTATACTGAATGGTTGGTTTTTTCTGCTTTGGGCAGGCAAATTTAACCAATGCCAACCTTGAAGGTGCACTGGCCACGGGAAATACCTCTTTCCGTGGTTCAACAATAAACGGAGCTGGTATGAATAACCGACATTTATTTTATTTTTAGTATCTCATCGGGGATTCTCTTCTTTTTTTTGTTCATACTCTCTCTCCCCACGTTCATTTAATACTTTATATATATTTTCCAAAGGTACTTTATACATATTTGAAAGGTTCTATTAGTTCCTTATAAGACCTAAAAGTCTAGTTTAGGAGAATTGAAAGGCGAGAATGACCAAGATTGACCTTAGATACACAAATAGAATCTTATTCTCTTTTTCATTGTATATTTCTTGTAAACCCAACATTTATGTTGCTTTTAGTATCTCATTGGGGATCCTCTTATCTCCAAAATTATTTTAGATGCCATAATACATTAACATAGGTTGTTATTCCAACCCCTCTATGCTTCAAAAGAAATTTGACTTTTAGGCATTTAGTTGAAACTTATTTTTGTCAGCAATGTGCTTAGACGAAAGAGTAGTAGGAAAAAATGCAATTGAACTAACAACGGATATAATTTTCTAAAAACTAGCAACGGAGTGGTTGTACGAAGAAATACTTATGCATAATTTACCTCATAATGGCAGACTTCACTGACGTGCCATTGAGAGAGGATCAGCGGGAATACCTTTGCAAAGTTGCAGATGGGTAAAGACAAATTCTTGTGTTTCTTAGGTTTGACTGTAAATGATTCATGATATATAGAACAGGAAACTTACTCATTTTTGTTTACAGGGTAAACCCAACTACTGGAAATGCAACCCGAGAGACCTTGCTCTGTGATTGAGACTAGAATTATATGGCAAGCTATTGAGGTACAAGAATAGTACAGATCAACTTAAAAATGTATAAAATAACCAGATCAGTATATCCAATCCAATGAGTTCAATTTTGTTATTC

mRNA sequence

CATCAATTAGAGAAAAGTAGTAGTCTTCCGGTATTACCACGTGGCAGAATCTACGTTGACAGAGGACCGTAAGTAAGATACGAACAGCTGCACACAAACAAAACTCATAATCCATTTCCAGATTATCCAATGCGGTTGCGGTTGGTGACATTATCCAATTCGAAAACGAAAACAATTTTTTGAATTTCAGCTTTCCGGAAATGGCTCTGCTCAACGCTTCATTATGTTGTTCCACTCCCAAAATTCCTTCAAGATCTCACCTTCTTCTTCCTCCCTCCATTTCCCCCCATTCTACTTCTCAGGTAAACTCTGCCCCTCCATTTCCACTCCCATTTTCTTCTCCTTTCTCTTCAAATGCTTTGATTTTACCCACAATATGAAGGTATTCAACCAACAACTTGAAGCTACACGGAATTTGGTTCTTTCCCTTGGACAGCCCACTTTCCTCGCTTTCATTTCTGCCTCTTTGTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGGCGGAGGTCCTTACGGAGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACCTTAATCAAGCAAGATTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCCAAGTTATTAGGTGCTAGCTTCTTCGATGCTGATTTAACAGGGGCGGATCTGTCAGATGCTGATCTCAGAGGTGCAGATTTTTCTCTTGCCAATGTTACCAAGGCAAATTTAACCAATGCCAACCTTGAAGGTGCACTGGCCACGGGAAATACCTCTTTCCGTGGTTCAACAATAAACGGAGCTGACTTCACTGACGTGCCATTGAGAGAGGATCAGCGGGAATACCTTTGCAAAGTTGCAGATGGGGTAAACCCAACTACTGGAAATGCAACCCGAGAGACCTTGCTCTGTGATTGAGACTAGAATTATATGGCAAGCTATTGAGGTACAAGAATAGTACAGATCAACTTAAAAATGTATAAAATAACCAGATCAGTATATCCAATCCAATGAGTTCAATTTTGTTATTC

Coding sequence (CDS)

ATGTTGTTCCACTCCCAAAATTCCTTCAAGATCTCACCTTCTTCTTCCTCCCTCCATTTCCCCCCATTCTACTTCTCAGGTAAACTCTGCCCCTCCATTTCCACTCCCATTTTCTTCTCCTTTCTCTTCAAATGCTTTGATTTTACCCACAATATGAAGGTATTCAACCAACAACTTGAAGCTACACGGAATTTGGTTCTTTCCCTTGGACAGCCCACTTTCCTCGCTTTCATTTCTGCCTCTTTGTTCCTCGCCGATCCTGCCCTAGCTTTTAAGGGCGGAGGTCCTTACGGAGCTGGGGTCACTAGAGGTCAGGATCTCTCTGGGAAAGATTTCAGTGGGAAGACCTTAATCAAGCAAGATTTCAAAACGTCTATTTTACGGCAAGCTAATTTTAAAGGTGCCAAGTTATTAGGTGCTAGCTTCTTCGATGCTGATTTAACAGGGGCGGATCTGTCAGATGCTGATCTCAGAGGTGCAGATTTTTCTCTTGCCAATGTTACCAAGGCAAATTTAACCAATGCCAACCTTGAAGGTGCACTGGCCACGGGAAATACCTCTTTCCGTGGTTCAACAATAAACGGAGCTGACTTCACTGACGTGCCATTGAGAGAGGATCAGCGGGAATACCTTTGCAAAGTTGCAGATGGGGTAAACCCAACTACTGGAAATGCAACCCGAGAGACCTTGCTCTGTGATTGA

Protein sequence

MLFHSQNSFKISPSSSSLHFPPFYFSGKLCPSISTPIFFSFLFKCFDFTHNMKVFNQQLEATRNLVLSLGQPTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD

Homology

[Close]

BLAST of PI0018221 vs. ExPASy Swiss-Prot
Match: O22160 (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 280.4 bits (716), Expect = 1.8e-74
Identity = 144/175 (82.29%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 63  RNLVLSLGQP----TFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLI 122
           R++V SLG+     +  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 123 KQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLTNANLE 182
           +QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NLTNANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 183 GALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 234
           GA  TGNTSF+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 170 GATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

[Close]

BLAST of PI0018221 vs. ExPASy Swiss-Prot
Match: B1WVN5 (Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 / BH68) OX=43989 GN=rfr32 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.6e-15
Identity = 56/126 (44.44%), Postives = 70/126 (55.56%), Query Frame = 0


Query: 107 LSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 166
           L G+DFSGK+L    F  + L  +NF  A L GA F  + L GADL  ADL      L +
Sbjct: 54  LIGEDFSGKSLTYAQFTNADLTDSNFSEADLRGAVFNGSALIGADLHGADLTNGLAYLTS 113

Query: 167 VTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 226
              A+LTNA L  A+    T F  + I GADF+   L   + + LC  ADGVNP TG +T
Sbjct: 114 FKGADLTNAVLTEAIMM-RTKFDDAKITGADFSLAVLDVYEVDKLCDRADGVNPKTGVST 173

Query: 227 RETLLC 233
           RE+L C
Sbjct: 174 RESLGC 178

[Close]

BLAST of PI0018221 vs. ExPASy Swiss-Prot
Match: Q8H1Q1 (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.1e-10
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 0


Query: 95  GPYGAGVTR---GQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGAD 154
           G +G G        DLS    S +   + +F ++ +R+++F G+   GA    A    A+
Sbjct: 101 GEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKAN 160

Query: 155 LSDADLRGADFSLANVTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYL 214
            S ADL         + +ANLTNA L  ++ T  +   G+ I GADF+D  +   Q++ L
Sbjct: 161 FSGADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQAL 220

Query: 215 CKVADGVNPTTGNATRETLLC 233
           CK A G NP TG  TR++L C
Sbjct: 221 CKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of PI0018221 vs. ExPASy Swiss-Prot
Match: Q9SE95 (FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.3e-07
Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 103 RGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 162
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADLR A  
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 163 SLANVTKANLTNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 210
             A++T ANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNADLTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

[Close]

BLAST of PI0018221 vs. ExPASy Swiss-Prot
Match: P73709 (Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1819 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.8e-06
Identity = 42/116 (36.21%), Postives = 63/116 (54.31%), Query Frame = 0


Query: 104 GQDLSGKDFSGKTL---------IKQDFK-------TSILRQANFKGAKLLGASFFDADL 163
           G DL G D SG TL         ++Q+ K        +IL +A+ +GA + G     ADL
Sbjct: 114 GADLRGADLSGATLTGACLRGANMRQEKKGYYTNLQAAILGRADLQGANMKGVDLSRADL 173

Query: 164 TGADLSDADLRGADFSLANVTKANLTNANLEGALATGNTSFRGSTINGADFTDVPL 204
           + A+L +A+LR  D     + KA+L+ ANL+GAL T + +  G+ +NGAD  +  L
Sbjct: 174 SYANLKEANLRDVD-----LRKADLSYANLKGALLT-DANLSGAKLNGADLQNANL 223

[Close]

BLAST of PI0018221 vs. ExPASy TrEMBL
Match: A0A5A7TDC5 (Thylakoid lumenal 15 kDa protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00790 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.0e-93
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 53  KVFNQQLEATRNLVLSLGQPTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 112
           +VFNQQLEATRNLVLSLGQPTFL FISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF
Sbjct: 36  QVFNQQLEATRNLVLSLGQPTFLVFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 95

Query: 113 SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 172
           SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL
Sbjct: 96  SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 155

Query: 173 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 232
           TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC
Sbjct: 156 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 215

Query: 233 D 234
           D
Sbjct: 216 D 216

[Close]

BLAST of PI0018221 vs. ExPASy TrEMBL
Match: A0A1S3B3C6 (thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485520 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 7.0e-93
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 53  KVFNQQLEATRNLVLSLGQPTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 112
           +VFNQQLEATRNLVLSLGQPTFL FISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF
Sbjct: 36  QVFNQQLEATRNLVLSLGQPTFLVFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 95

Query: 113 SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 172
           SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL
Sbjct: 96  SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 155

Query: 173 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 232
           TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC
Sbjct: 156 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 215

Query: 233 D 234
           D
Sbjct: 216 D 216

[Close]

BLAST of PI0018221 vs. ExPASy TrEMBL
Match: A0A0A0KA71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008700 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 2.2e-91
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 53  KVFNQQLEATRNLVLSLGQPTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 112
           +VFNQQL+ATRN VLSLGQPTFLAF+SASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF
Sbjct: 34  QVFNQQLQATRNFVLSLGQPTFLAFVSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 93

Query: 113 SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 172
           SGKTLIKQDFKTSILRQANFKGA LLGASFFDADLTGADLSDADLRGADFSLANVTKANL
Sbjct: 94  SGKTLIKQDFKTSILRQANFKGANLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 153

Query: 173 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 232
           +NANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC
Sbjct: 154 SNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 213

Query: 233 D 234
           D
Sbjct: 214 D 214

[Close]

BLAST of PI0018221 vs. ExPASy TrEMBL
Match: A0A6J1BVJ8 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006104 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 9.1e-85
Identity = 167/184 (90.76%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 54  VFNQQLEATRNLVLSLGQ----PTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSG 113
           V  QQLEA+RNL+LS+G+     TFLA +SASLFLADPALAFKGGGPYGAGVTRGQDLSG
Sbjct: 35  VLKQQLEASRNLILSVGESASKATFLALLSASLFLADPALAFKGGGPYGAGVTRGQDLSG 94

Query: 114 KDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTK 173
           KDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTK
Sbjct: 95  KDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTK 154

Query: 174 ANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRET 233
           ANL+NANLEGALATGNTSFRGSTI GADFTDVPLREDQREYLCKVADGVNPTTGNATR+T
Sbjct: 155 ANLSNANLEGALATGNTSFRGSTIEGADFTDVPLREDQREYLCKVADGVNPTTGNATRDT 214

[Close]

BLAST of PI0018221 vs. ExPASy TrEMBL
Match: A0A6J1JKT4 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487791 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 2.0e-84
Identity = 167/187 (89.30%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 51  NMKVFNQQLEATRNLVLSLGQ----PTFLAFISASLFLADPALAFKGGGPYGAGVTRGQD 110
           N +V   Q+EATRN VLS+G+     +FLA ISASLFLADPALAFKGGGPYGAGVTRGQD
Sbjct: 32  NPRVMKHQVEATRNFVLSVGESASKASFLALISASLFLADPALAFKGGGPYGAGVTRGQD 91

Query: 111 LSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 170
           L+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN
Sbjct: 92  LTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 151

Query: 171 VTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 230
           VTKANL+NANLEGALATGNTSFRGS INGADFTDVPLREDQREYLCKVADGVNPTTGNAT
Sbjct: 152 VTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 211

Query: 231 RETLLCD 234
           RETLLC+
Sbjct: 212 RETLLCN 218

[Close]

BLAST of PI0018221 vs. NCBI nr
Match: XP_008441390.1 (PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucumis melo] >KAA0041434.1 thylakoid lumenal 15 kDa protein 1 [Cucumis melo var. makuwa] >TYK24308.1 thylakoid lumenal 15 kDa protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 350.1 bits (897), Expect = 1.4e-92
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 53  KVFNQQLEATRNLVLSLGQPTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 112
           +VFNQQLEATRNLVLSLGQPTFL FISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF
Sbjct: 36  QVFNQQLEATRNLVLSLGQPTFLVFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 95

Query: 113 SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 172
           SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL
Sbjct: 96  SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 155

Query: 173 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 232
           TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC
Sbjct: 156 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 215

Query: 233 D 234
           D
Sbjct: 216 D 216

[Close]

BLAST of PI0018221 vs. NCBI nr
Match: XP_004138481.2 (thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucumis sativus] >KGN45739.2 hypothetical protein Csa_005512 [Cucumis sativus])

HSP 1 Score: 345.1 bits (884), Expect = 4.6e-91
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 53  KVFNQQLEATRNLVLSLGQPTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 112
           +VFNQQL+ATRN VLSLGQPTFLAF+SASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF
Sbjct: 61  QVFNQQLQATRNFVLSLGQPTFLAFVSASLFLADPALAFKGGGPYGAGVTRGQDLSGKDF 120

Query: 113 SGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 172
           SGKTLIKQDFKTSILRQANFKGA LLGASFFDADLTGADLSDADLRGADFSLANVTKANL
Sbjct: 121 SGKTLIKQDFKTSILRQANFKGANLLGASFFDADLTGADLSDADLRGADFSLANVTKANL 180

Query: 173 TNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 232
           +NANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC
Sbjct: 181 SNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLC 240

Query: 233 D 234
           D
Sbjct: 241 D 241

[Close]

BLAST of PI0018221 vs. NCBI nr
Match: XP_038883977.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 340.1 bits (871), Expect = 1.5e-89
Identity = 182/206 (88.35%), Postives = 189/206 (91.75%), Query Frame = 0


Query: 34  STPIFFSFLFKCFDF--THNMKVFNQQLEATRNLVLSLGQ----PTFLAFISASLFLADP 93
           S+P+  S  F    F  T NMKVFNQQLEATR+LVLSLG+     +FLAF+SASLFLADP
Sbjct: 32  SSPLPLSSPFSSIPFISTTNMKVFNQQLEATRHLVLSLGESASKASFLAFLSASLFLADP 91

Query: 94  ALAFKGGGPYGAGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADL 153
           ALAFKGGGPYGAGVTRGQDLSGKDFS KTLIKQDFKTSILRQANFKGAKLLGASFFDADL
Sbjct: 92  ALAFKGGGPYGAGVTRGQDLSGKDFSWKTLIKQDFKTSILRQANFKGAKLLGASFFDADL 151

Query: 154 TGADLSDADLRGADFSLANVTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQ 213
           TGADLSDADLRGADFSLANVTKANL+NANLEGALATGNTSFRGSTINGADFTDVPLREDQ
Sbjct: 152 TGADLSDADLRGADFSLANVTKANLSNANLEGALATGNTSFRGSTINGADFTDVPLREDQ 211

Query: 214 REYLCKVADGVNPTTGNATRETLLCD 234
           REYLCKVADGVNPTTGNATRETLLCD
Sbjct: 212 REYLCKVADGVNPTTGNATRETLLCD 237

[Close]

BLAST of PI0018221 vs. NCBI nr
Match: XP_022133545.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 323.2 bits (827), Expect = 1.9e-84
Identity = 167/184 (90.76%), Postives = 175/184 (95.11%), Query Frame = 0


Query: 54  VFNQQLEATRNLVLSLGQ----PTFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSG 113
           V  QQLEA+RNL+LS+G+     TFLA +SASLFLADPALAFKGGGPYGAGVTRGQDLSG
Sbjct: 35  VLKQQLEASRNLILSVGESASKATFLALLSASLFLADPALAFKGGGPYGAGVTRGQDLSG 94

Query: 114 KDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTK 173
           KDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTK
Sbjct: 95  KDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTK 154

Query: 174 ANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRET 233
           ANL+NANLEGALATGNTSFRGSTI GADFTDVPLREDQREYLCKVADGVNPTTGNATR+T
Sbjct: 155 ANLSNANLEGALATGNTSFRGSTIEGADFTDVPLREDQREYLCKVADGVNPTTGNATRDT 214

[Close]

BLAST of PI0018221 vs. NCBI nr
Match: XP_022991097.1 (thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 322.0 bits (824), Expect = 4.2e-84
Identity = 167/187 (89.30%), Postives = 175/187 (93.58%), Query Frame = 0


Query: 51  NMKVFNQQLEATRNLVLSLGQ----PTFLAFISASLFLADPALAFKGGGPYGAGVTRGQD 110
           N +V   Q+EATRN VLS+G+     +FLA ISASLFLADPALAFKGGGPYGAGVTRGQD
Sbjct: 32  NPRVMKHQVEATRNFVLSVGESASKASFLALISASLFLADPALAFKGGGPYGAGVTRGQD 91

Query: 111 LSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 170
           L+GKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN
Sbjct: 92  LTGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLAN 151

Query: 171 VTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 230
           VTKANL+NANLEGALATGNTSFRGS INGADFTDVPLREDQREYLCKVADGVNPTTGNAT
Sbjct: 152 VTKANLSNANLEGALATGNTSFRGSIINGADFTDVPLREDQREYLCKVADGVNPTTGNAT 211

Query: 231 RETLLCD 234
           RETLLC+
Sbjct: 212 RETLLCN 218

[Close]

BLAST of PI0018221 vs. TAIR 10
Match: AT2G44920.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 280.4 bits (716), Expect = 1.3e-75
Identity = 144/175 (82.29%), Postives = 156/175 (89.14%), Query Frame = 0


Query: 63  RNLVLSLGQP----TFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLI 122
           R++V SLG+     +  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 123 KQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLTNANLE 182
           +QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NLTNANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 183 GALATGNTSFRGSTINGADFTDVPLREDQREYLCKVADGVNPTTGNATRETLLCD 234
           GA  TGNTSF+GS I GADFTDVPLR+DQR YLCKVADGVN TTGNATR+TLLC+
Sbjct: 170 GATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224

[Close]

BLAST of PI0018221 vs. TAIR 10
Match: AT2G44920.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 212.2 bits (539), Expect = 4.4e-55
Identity = 112/138 (81.16%), Postives = 121/138 (87.68%), Query Frame = 0


Query: 63  RNLVLSLGQP----TFLAFISASLFLADPALAFKGGGPYGAGVTRGQDLSGKDFSGKTLI 122
           R++V SLG+     +  A +SASLF  DPALAFKGGGPYG GVTRGQDLSGKDFSG+TLI
Sbjct: 50  RSVVWSLGEEVSKRSLFALVSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGQTLI 109

Query: 123 KQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADFSLANVTKANLTNANLE 182
           +QDFKTSILRQANFKGAKLLGASFFDADLTGADLS+ADLRGADFSLANVTK NLTNANLE
Sbjct: 110 RQDFKTSILRQANFKGAKLLGASFFDADLTGADLSEADLRGADFSLANVTKVNLTNANLE 169

Query: 183 GALATGNTSFRGSTINGA 197
           GA  TGNTSF+GS I GA
Sbjct: 170 GATVTGNTSFKGSNITGA 187

[Close]

BLAST of PI0018221 vs. TAIR 10
Match: AT1G12250.1 (Pentapeptide repeat-containing protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 0


Query: 95  GPYGAGVTR---GQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGAD 154
           G +G G        DLS    S +   + +F ++ +R+++F G+   GA    A    A+
Sbjct: 101 GEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKAN 160

Query: 155 LSDADLRGADFSLANVTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYL 214
            S ADL         + +ANLTNA L  ++ T  +   G+ I GADF+D  +   Q++ L
Sbjct: 161 FSGADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQAL 220

Query: 215 CKVADGVNPTTGNATRETLLC 233
           CK A G NP TG  TR++L C
Sbjct: 221 CKYATGTNPLTGVDTRKSLGC 240

[Close]

BLAST of PI0018221 vs. TAIR 10
Match: AT1G12250.2 (Pentapeptide repeat-containing protein )

HSP 1 Score: 65.9 bits (159), Expect = 5.1e-11
Identity = 48/141 (34.04%), Postives = 72/141 (51.06%), Query Frame = 0


Query: 95  GPYGAGVTR---GQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGAD 154
           G +G G        DLS    S +   + +F ++ +R+++F G+   GA    A    A+
Sbjct: 27  GEFGIGSAAQYGSADLSKTVHSNENFRRANFTSADMRESDFSGSTFNGAYLEKAVAYKAN 86

Query: 155 LSDADLRGADFSLANVTKANLTNANLEGALATGNTSFRGSTINGADFTDVPLREDQREYL 214
            S ADL         + +ANLTNA L  ++ T  +   G+ I GADF+D  +   Q++ L
Sbjct: 87  FSGADLSDTLMDRMVLNEANLTNAVLVRSVLT-RSDLGGAKIEGADFSDAVIDLLQKQAL 146

Query: 215 CKVADGVNPTTGNATRETLLC 233
           CK A G NP TG  TR++L C
Sbjct: 147 CKYATGTNPLTGVDTRKSLGC 166

[Close]

BLAST of PI0018221 vs. TAIR 10
Match: AT5G55000.2 (potassium channel tetramerisation domain-containing protein / pentapeptide repeat-containing protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 42/111 (37.84%), Postives = 53/111 (47.75%), Query Frame = 0


Query: 103 RGQDLSGKDFSGKTLIKQDFKTSILRQANFKGAKLLGASFFDADLTGADLSDADLRGADF 162
           R  D  G  F    L + +F ++ LR A   G  L  A+  DA L G     ADLR A  
Sbjct: 174 RNADAEGSIFHNAILRECEFTSANLRGALLAGTNLQSANLQDACLVGCSFCGADLRTAHL 233

Query: 163 SLANVTKANLTNANLEGALATG----NTSFRGSTINGADFTDVPLREDQRE 210
             A++T ANL  ANLEGA   G    N +F+G+ +  A    V LRE   E
Sbjct: 234 QNADLTNANLEGANLEGANLKGAKLSNANFKGANLQRAYLRHVNLREAHME 284

The following BLAST results are available for this feature:

BLAST of PI0018221 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22160	1.8e-74	82.29	Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
B1WVN5	9.6e-15	44.44	Pentapeptide repeat protein Rfr32 OS=Crocosphaera subtropica (strain ATCC 51142 ...	[more]
Q8H1Q1	7.1e-10	34.04	Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9SE95	3.3e-07	37.84	FH protein interacting protein FIP2 OS=Arabidopsis thaliana OX=3702 GN=FIP2 PE=1...	[more]
P73709	4.8e-06	36.21	Uncharacterized protein slr1819 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) ...	[more]

BLAST of PI0018221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDC5	7.0e-93	98.90	Thylakoid lumenal 15 kDa protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3B3C6	7.0e-93	98.90	thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A0A0KA71	2.2e-91	96.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008700 PE=4 SV=1	[more]
A0A6J1BVJ8	9.1e-85	90.76	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 OS=Momordica charan...	[more]
A0A6J1JKT4	2.0e-84	89.30	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 OS=Cucurbita maxima...	[more]

BLAST of PI0018221 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441390.1	1.4e-92	98.90	PREDICTED: thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucumis melo] >KAA...	[more]
XP_004138481.2	4.6e-91	96.69	thylakoid lumenal 15 kDa protein 1, chloroplastic [Cucumis sativus] >KGN45739.2 ...	[more]
XP_038883977.1	1.5e-89	88.35	thylakoid lumenal 15 kDa protein 1, chloroplastic [Benincasa hispida]	[more]
XP_022133545.1	1.9e-84	90.76	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X1 [Momordica charanti...	[more]
XP_022991097.1	4.2e-84	89.30	thylakoid lumenal 15 kDa protein 1, chloroplastic isoform X2 [Cucurbita maxima]	[more]

BLAST of PI0018221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44920.2	1.3e-75	82.29	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G44920.1	4.4e-55	81.16	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12250.1	5.1e-11	34.04	Pentapeptide repeat-containing protein	[more]
AT1G12250.2	5.1e-11	34.04	Pentapeptide repeat-containing protein	[more]
AT5G55000.2	2.3e-08	37.84	potassium channel tetramerisation domain-containing protein / pentapeptide repea...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001646	Pentapeptide repeat	PFAM	PF00805	Pentapeptide	coord: 125..163 e-value: 1.3E-12 score: 47.1
None	No IPR available	GENE3D	2.160.20.80		coord: 90..233 e-value: 5.7E-47 score: 160.5
None	No IPR available	SUPERFAMILY	141571	Pentapeptide repeat-like	coord: 102..204
IPR044213	Thylakoid lumenal 15kDa protein 1-like	PANTHER	PTHR47200	THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC	coord: 56..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018221.2	PI0018221.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009543	chloroplast thylakoid lumen