PI0018210 (gene) Melon (PI 482460) v1

Overview


Name	PI0018210
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Cold-regulated protein
Location	chr06: 13283931 .. 13284445 (+)
RNA-Seq Expression	PI0018210
Synteny	PI0018210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTCCCAAATTCCCTACTTTTAATTTACCAACTCTCGCCGAATTCGTCCTCTTCCTATTGTTCGTTATACCATCCGTTGTGCTCCGGTAACTTAATCCGGCGAATGGCTGTTGGAATCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGCTTTTTGGCTTTCGCTGTGGCGGCTGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTCTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCAGCTACTGTGGTATACCCGTCGGTGTCTAATGCGGTTCCGATTTGAGAGAATACGCAACTAATTAATGCCGTTCCTTTACATGTTTATTTTCCCATGTCCAATGTATAATAATAATGCATCTCAATTTAAGAGTTAAATTAATAGCCTAAATATATACCCTATGTCTCTTCTCATATATGTCTACCCAACTAATAATAACAATTGTAATTTAATAAATAAA

mRNA sequence

CAAATTCCCAAATTCCCTACTTTTAATTTACCAACTCTCGCCGAATTCGTCCTCTTCCTATTGTTCGTTATACCATCCGTTGTGCTCCGGTAACTTAATCCGGCGAATGGCTGTTGGAATCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGCTTTTTGGCTTTCGCTGTGGCGGCTGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTCTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCAGCTACTGTGGTATACCCGTCGGTGTCTAATGCGGTTCCGATTTGAGAGAATACGCAACTAATTAATGCCGTTCCTTTACATGTTTATTTTCCCATGTCCAATGTATAATAATAATGCATCTCAATTTAAGAGTTAAATTAATAGCCTAAATATATACCCTATGTCTCTTCTCATATATGTCTACCCAACTAATAATAACAATTGTAATTTAATAAATAAA

Coding sequence (CDS)

ATGGCTGTTGGAATCGGCGTTCCGATCTGCATCGAATGTGGGACCCACAGCAATCCGTGCAGATGCAAGGTGGTGGGGCCGACCCTGGGCTTTTTGGCTTTCGCTGTGGCGGCTGTGGTGGAGTGGCCGGTGGGAGCTCTGGTTTTCTGCTTCCGCCACCACAAGGGCCGCCGTATCATGGCGCATCCAGCTACTGTGGTATACCCGTCGGTGTCTAATGCGGTTCCGATTTGA

Protein sequence

MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATVVYPSVSNAVPI

Homology

[Close]

BLAST of PI0018210 vs. ExPASy TrEMBL
Match: A0A1S3C5C8 (uncharacterized protein LOC103496842 OS=Cucumis melo OX=3656 GN=LOC103496842 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-37
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM
Sbjct: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHPATVVYPSVSNA+PI
Sbjct: 61 AHPATVVYPSVSNAIPI 77

[Close]

BLAST of PI0018210 vs. ExPASy TrEMBL
Match: A0A0A0LA45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346910 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.1e-37
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M VGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM
Sbjct: 1  MGVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHPATVVYPSVSNAVPI
Sbjct: 61 AHPATVVYPSVSNAVPI 77

[Close]

BLAST of PI0018210 vs. ExPASy TrEMBL
Match: A0A6J1FA13 (uncharacterized protein LOC111442190 OS=Cucurbita moschata OX=3662 GN=LOC111442190 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 4.4e-36
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIM
Sbjct: 1  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHP TVVYPSVSNAVPI
Sbjct: 61 AHPVTVVYPSVSNAVPI 77

[Close]

BLAST of PI0018210 vs. ExPASy TrEMBL
Match: A0A6J1CQ64 (uncharacterized protein LOC111013291 OS=Momordica charantia OX=3673 GN=LOC111013291 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.8e-36
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIM
Sbjct: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHPATVVYPSVSNAVPI
Sbjct: 61 AHPATVVYPSVSNAVPI 77

[Close]

BLAST of PI0018210 vs. ExPASy TrEMBL
Match: A0A2N9J3H0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58942 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 7.8e-33
Identity = 66/77 (85.71%), Postives = 73/77 (94.81%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M  GIG+P+C++CGT SNPCRCKVVGPTLGFLAFAVAA+VEWPVGALV+CFRH KGRRIM
Sbjct: 1  MTGGIGIPVCVQCGTPSNPCRCKVVGPTLGFLAFAVAAIVEWPVGALVYCFRHMKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHPATVVYPSVSNA+PI
Sbjct: 61 AHPATVVYPSVSNAIPI 77

[Close]

BLAST of PI0018210 vs. NCBI nr
Match: XP_008457074.1 (PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 3.7e-37
Identity = 75/77 (97.40%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVG+GVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM
Sbjct: 1  MAVGVGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHPATVVYPSVSNA+PI
Sbjct: 61 AHPATVVYPSVSNAIPI 77

[Close]

BLAST of PI0018210 vs. NCBI nr
Match: XP_031737948.1 (uncharacterized protein LOC116402578 [Cucumis sativus])

HSP 1 Score: 163.7 bits (413), Expect = 6.3e-37
Identity = 76/77 (98.70%), Postives = 76/77 (98.70%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          M VGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM
Sbjct: 1  MGVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHPATVVYPSVSNAVPI
Sbjct: 61 AHPATVVYPSVSNAVPI 77

[Close]

BLAST of PI0018210 vs. NCBI nr
Match: XP_023528466.1 (uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 160.2 bits (404), Expect = 7.0e-36
Identity = 73/77 (94.81%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVGIGVPIC+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIM
Sbjct: 1  MAVGIGVPICVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHP TVVYPSVSNAVPI
Sbjct: 61 AHPVTVVYPSVSNAVPI 77

[Close]

BLAST of PI0018210 vs. NCBI nr
Match: XP_022935253.1 (uncharacterized protein LOC111442190 [Cucurbita moschata])

HSP 1 Score: 159.8 bits (403), Expect = 9.1e-36
Identity = 72/77 (93.51%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVGIGVP+C+ECGTH NPCRCKVVGPTLGFLAFAVAAVVEWPVGALV+CFRHHKGRRIM
Sbjct: 1  MAVGIGVPVCVECGTHRNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVYCFRHHKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHP TVVYPSVSNAVPI
Sbjct: 61 AHPVTVVYPSVSNAVPI 77

[Close]

BLAST of PI0018210 vs. NCBI nr
Match: XP_022143411.1 (uncharacterized protein LOC111013291 [Momordica charantia])

HSP 1 Score: 158.7 bits (400), Expect = 2.0e-35
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIM 60
          MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFA AAVVEWPVGALV+CFRH KGRRIM
Sbjct: 1  MAVGIGVPICIECGTHSNPCRCKVVGPTLGFLAFAAAAVVEWPVGALVYCFRHAKGRRIM 60

Query: 61 AHPATVVYPSVSNAVPI 78
          AHPATVVYPSVSNAVPI
Sbjct: 61 AHPATVVYPSVSNAVPI 77

[Close]

BLAST of PI0018210 vs. TAIR 10
Match: AT3G03341.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 118.6 bits (296), Expect = 2.2e-27
Identity = 50/71 (70.42%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 7  VPICIECGTHSNPCRCKVVGPTLGFLAFAVAAVVEWPVGALVFCFRHHKGRRIMAHPATV 66
          +PIC++CGT  NPCRCKVVGPTLG +AF  A +VEWPVGALV+ F+H KGRRIM HPAT 
Sbjct: 2  IPICVQCGTGGNPCRCKVVGPTLGLVAFVAAGIVEWPVGALVYIFKHAKGRRIMGHPATH 61

Query: 67 VYPSVSNAVPI 78
          VYP VS ++PI
Sbjct: 62 VYPKVSRSIPI 72

The following BLAST results are available for this feature:

BLAST of PI0018210 vs.


Match Name	E-value	Identity	Description

BLAST of PI0018210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5C8	1.8e-37	97.40	uncharacterized protein LOC103496842 OS=Cucumis melo OX=3656 GN=LOC103496842 PE=...	[more]
A0A0A0LA45	3.1e-37	98.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G346910 PE=4 SV=1	[more]
A0A6J1FA13	4.4e-36	93.51	uncharacterized protein LOC111442190 OS=Cucurbita moschata OX=3662 GN=LOC1114421...	[more]
A0A6J1CQ64	9.8e-36	96.10	uncharacterized protein LOC111013291 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A2N9J3H0	7.8e-33	85.71	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58942 PE=4 SV=1	[more]

BLAST of PI0018210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457074.1	3.7e-37	97.40	PREDICTED: uncharacterized protein LOC103496842 [Cucumis melo]	[more]
XP_031737948.1	6.3e-37	98.70	uncharacterized protein LOC116402578 [Cucumis sativus]	[more]
XP_023528466.1	7.0e-36	94.81	uncharacterized protein LOC111791385 [Cucurbita pepo subsp. pepo]	[more]
XP_022935253.1	9.1e-36	93.51	uncharacterized protein LOC111442190 [Cucurbita moschata]	[more]
XP_022143411.1	2.0e-35	96.10	uncharacterized protein LOC111013291 [Momordica charantia]	[more]

BLAST of PI0018210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G03341.1	2.2e-27	70.42	unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34673	FAMILY NOT NAMED	coord: 1..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018210.1	PI0018210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane