PI0018174 (gene) Melon (PI 482460) v1

Overview


Name	PI0018174
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	zinc finger CCCH domain-containing protein 25
Location	chr11: 7123616 .. 7127103 (-)
RNA-Seq Expression	PI0018174
Synteny	PI0018174

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCCTTTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTCGCCGTCTTCGCCCAGTAAGTTCACAATTCTATCTATTTTCTCCCCCTTCGTTGTTTTGATTCTGCTCTCTTGCAGCTCTCTGTTCGTATTTACTTGATAGATTGTGTAGTTAGATAAGTTTAGATTGAGATGTTGTGCTAGATTTGTGTGTTCGACATTGAAATGAATTATTTCTCCCTTGGTCGTGGTCTTGTTGCTCCAGTAGCTTCTAAATGGGACTTTGCTGGTAGTGATGAAAATTTATGGGGTTCTGTGCAAGTAGAAGAATTTGTTTGTAGGTTGTTGTAAATTGTTTTTAGTCGACAATCCTTGGTATTTTGAATTTCGTAACTTAAGAGGTGGAGGTGATGTTTCAAGTTGTGCAAATAGACTAATTGAGCTCATATTTGTTAGTCCAATAGATTTTGCTGTTTCTTGTATTGTCAGCTTTTCCTATTTTAGAATTCATCTTCATTGTGACCTCGGAGGGGCAATCATATGAGAAGGGTTGGGATGTTTGGAGATACCTCTTTAGGTCTTAGGTTTAAGTCTCAGGTGGAAAACTTGGTTCCAATTGGTAATATTTGGTTTTTGTTTTTAGTTTTTGAAAATTAAGTCTATAGACATCCCTCGCAGTTGCATCTCTCTCTCCTTTTGTTTTTAGATGTGGTTAAGAATTCAGCTCCTTTTTAAAAAATATGCAAATCATGATAAGAAATTGAGAGGATATAGACTTGGTTTTCGAAAACTAAAAACCAAATGGTTACCAAACGGGCCCTATTGGGCCTTAGGAAGCACAGATACTTGACACGTGACACACCATTTTTTCAAAAAAGTAGGACACGACACGTCGGGGACATGTCAATTTTTTAGTTAAAAGAATTAAATATATATCATGCATATAAACATATTGTGAAATATTCCAATTAAAAACATCAAAATAAAGTTTAGAGCCATCAAAACATAAGTTTTAGTAGAGTAGTTTGTTCAACACAACAAAAGCCAAAAGGTTAAAAACTACAAAACTACAAAACTACAAAACTACAAAATAAAATAAAAAACATGTCTTCATTCTTCTCCAATGTCCTCCTGAAAATTCTGTACTTGAGCCTCACCACCAGCATCGGTAAAAATTATAGCTTCTAATTCTGATTCGTCCAAAGATAAACTAGCCACCTCAAGCATTCGTGCATCTTCGCTTATAACCAAATAAGATTAATGGAAAAAAATTATATGATAATTGATTTGATATCATACTGTCCATTGTCCGGCCCCAAAGCATGAAAAATAGAAAGAAAAAAAAGAAGAAAGAGAGAAACCGGCGACTGGCAAGAGGGTTGGCGTCCAAACTTCGGGAAAACTGGACAGAAACGGTGAGAGGGTTAGGACAGAGAGGGTTGGTGGGGAGATTTGGAGAAATCGAGAGAGGCTTTTCTAAGGCTTTTCTTTGTGTTTTTTTTCCAGCCATGTTGGGGCGTGTCTGAGATTAAAAAAAATTTGACACGCCAGCTGGTGTGTCAGTGTTGGAAACATGTCCGACACTGACACTTAGCCATCTTAGAAGTGTCAGTGCTTCTTAGACGGGGCCTAAGGTACTAAAAAGCTTTGTTCTGGAGCTAGCCTTGGCGTGGGGAAGGCCTCTTGGCAACTAGCAGGATAGGTTCTACGCATAATGCTAGAAGAGCTCCTTGATATCTTGGTTTATGTGTGTGTGTGTAATGACATTTGTTTCAATCAATAAAAGAATCTTTTTCTTCTTTCTTGCCCTTTCACTGTTTAGTTGTCTGTAAATGCATTTTTAAGGCTACATGTTCACTTGTGGGTTATTTGCTTTTTTGAATATTGAAATGTATTTGAACGTACAGGTATGGAGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTACGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGGTTGTCTCCTTCTCCTCGCTCTAAACTGTCCATTGTTTGTTATATGGGACTGAATGCAGATCTCTAAGTAATATTGTTTGTCTCTTTCAGACAATTTGAATGGTGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAAGAACAAAAAGGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGTGGAGCTGGATGCAAATTCTCCCATGATGAGAGGTATGTGTGAGACCTCCTATTATGTAAATTGTCTCTAGAAAGGACAGAAGGAGGTTTTGATCCTTGACAGTTTGTTAGTGGGGAGAAGGGATGGTTTGATGTACAGCAAAGGAAGTTTGTTGATTTTTGTAGGGCGAATATCTTTGCTTCACGGGATTGTAGTTTAGCTTTTACCTTTAATGTTACTAGCTAGTTGTGTCTGAATTGAATAAAAGAAGTTTGAAGACTATTTTTTCTTCAGCATGCTTCGATTAGAGTTTTAGCTTCACTTTAAGAAATTTGATGCATGGAGATTGTTCATTTTTCAGAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACGGTAGAAAAAATCACGACAAAGAATTACATGCAAAAGGAAGGAAAAATGGTGATGACTTAGGAAGACATCCAAGGGAAACTATTGGGAGTCTGAGGCAGGAAAATAAACCGAAAGGTTGGGATGATAGTAAAGAATCAGGGCTTAAGTCGAGAGAGGATCATGACAGGAAAGATGAGAAGAGATTGAGAAGACATGATCTTGATGGCAATCCTGATCCAAAGTCAGGAGATGATCATTATAAAAGGGAAGAGAAGAGATCGAGAAGACATGATCTTGATGGCAATCCTGATCCAAAGTCAGGAGTTGATCATTATAAAAGGGAAGAGAAGGGACCTAGAAGGAACCATGATGATAACAGGAAAGATGAGAAAAGATTGAGAAAACATGACGACGACGATGAGATGAAAATAGAAGATGATTGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAACATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCACGGCAACGAAGAGTATCCACCAAAGCTGAGGGAAGATGATAAAGAAGGGAAAGAGATATATCGGTAAGACATCGCTCAGAATCGCATAGGAGGGAAAATCCAGACGAGAAGAGAGATTATCGGTCCTCTCATGGTGGTAGAGATTCTTCATCCCATTCTCATAGAGAAAGAAACAATGACCATCGTAGATAA

mRNA sequence

ATGAATCCTTTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTCGCCGTCTTCGCCCAGTATGGAGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTACGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGACAATTTGAATGGTGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAAGAACAAAAAGGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGTGGAGCTGGATGCAAATTCTCCCATGATGAGAGGTATGTGTGAGACCTCCTATTATAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACGGTAGAAAAAATCACGACAAAGAATTACATGCAAAAGGAAGGAAAAATGGTGATGACTTAGGAAGACATCCAAGGGAAACTATTGGGAGTCTGAGGCAGGAAAATAAACCGAAAGGTTGGGATGATAGTAAAGAATCAGGGCTTAAGTCGAGAGAGGATCATGACAGGAAAGATGAGAAGAGATTGAGAAGACATGATCTTGATGGCAATCCTGATCCAAAGTCAGGAGATGATCATTATAAAAGGGAAGAGAAGAGATCGAGAAGACATGATCTTGATGGCAATCCTGATCCAAAGTCAGGAGTTGATCATTATAAAAGGGAAGAGAAGGGACCTAGAAGGAACCATGATGATAACAGGAAAGATGAGAAAAGATTGAGAAAACATGACGACGACGATGAGATGAAAATAGAAGATGATTGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAACATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCACGGCAACGAAGAAAGGGAAAGAGATATATCGGTAAGACATCGCTCAGAATCGCATAGGAGGGAAAATCCAGACGAGAAGAGAGATTATCGGTCCTCTCATGGTGGTAGAGATTCTTCATCCCATTCTCATAGAGAAAGAAACAATGACCATCGTAGATAA

Coding sequence (CDS)

ATGAATCCTTTAACCCTAGTCAAACGCATCCAGAAAATCAATTCTCAAGAGGCAGCGCTTGGGATTTCTGAGGAAGCTTCATGGCACGCCAAATACAAAGATTCCGCCTACGTTTTCGTCGGAGGCATTCCTTATGATCTCACTGAGGGTGATCTCCTCGCCGTCTTCGCCCAGTATGGAGAGATTGTAGATGTCAATCTTATCAGAGACAAGGGTACGGGAAAATCAAAAGGCTACGCCTTTGTTGCATATGAAGATCAGAGAAGTACAAATCTTGCTGTAGACAATTTGAATGGTGCACAGATTCTAGGTCGAATCATTAGGGTTGATCATGTGTCTAAATATAAAAAGAAGGAAGAGGAAGATGAAGAAGAAGAACAAAAAGGAGGGAAGCTCGGGGTGTTTGTCGTGCCTTTCAAAGGGGTGAATGTACTCGTGGAGCTGGATGCAAATTCTCCCATGATGAGAGGTATGTGTGAGACCTCCTATTATAGAGCTGCAAACACGGGCTGGGGGGCGGCAGAAGATGCAAGTTCAAAATGGGGGCATGACAAGTTTGACGGTAGAAAAAATCACGACAAAGAATTACATGCAAAAGGAAGGAAAAATGGTGATGACTTAGGAAGACATCCAAGGGAAACTATTGGGAGTCTGAGGCAGGAAAATAAACCGAAAGGTTGGGATGATAGTAAAGAATCAGGGCTTAAGTCGAGAGAGGATCATGACAGGAAAGATGAGAAGAGATTGAGAAGACATGATCTTGATGGCAATCCTGATCCAAAGTCAGGAGATGATCATTATAAAAGGGAAGAGAAGAGATCGAGAAGACATGATCTTGATGGCAATCCTGATCCAAAGTCAGGAGTTGATCATTATAAAAGGGAAGAGAAGGGACCTAGAAGGAACCATGATGATAACAGGAAAGATGAGAAAAGATTGAGAAAACATGACGACGACGATGAGATGAAAATAGAAGATGATTGCTATAGGAAGGAAGAAAATAGGTATAGAAGGAACCAAGACAATGAACTCCCACAACATTCGAGAAGAGACTACAATACAAGGGAAGAAGACAGATCATCAAAAAGGCACGGCAACGAAGAAAGGGAAAGAGATATATCGGTAAGACATCGCTCAGAATCGCATAGGAGGGAAAATCCAGACGAGAAGAGAGATTATCGGTCCTCTCATGGTGGTAGAGATTCTTCATCCCATTCTCATAGAGAAAGAAACAATGACCATCGTAGATAA

Protein sequence

MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEEEDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGMCETSYYRAANTGWGAAEDASSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKSREDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEKGPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREEDRSSKRHGNEERERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHSHRERNNDHRR

Homology

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BLAST of PI0018174 vs. ExPASy Swiss-Prot
Match: Q10B98 (Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0826400 PE=2 SV=1)

HSP 1 Score: 237.3 bits (604), Expect = 3.2e-61
Identity = 160/323 (49.54%), Postives = 207/323 (64.09%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VKR Q IN +EA LGI E+ SWHAK+KDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTQVKRTQVINQKEALLGIGEDGSWHAKFKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           E+VDVNL+RDKGTGKSKG+AF+AYEDQRST LAVDNLNGA++LGRI+RVDHVSKYKKKEE
Sbjct: 61  EVVDVNLVRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGAKVLGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKGGKL-GVFVVPFKGVNVLVELDANSPMMRG-MCETSY--YRAANTGWGAAED 180
           EDEEE QK  +  GV     KG       + N    RG  C  S+   R ANTGWG+ E+
Sbjct: 121 EDEEELQKKREARGVCYAFQKG-------ECN----RGASCRYSHDEQRNANTGWGSKEE 180

Query: 181 ASSKWGHDK-FDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGL 240
           + ++W HD+  +   +H K   + G +   D  +   ++ G   Q ++ + + D ++S L
Sbjct: 181 SKARWEHDRHHEPPMSHKKFPSSAGEQRFPDRAKEENKSTGREGQSSRSEAYKD-RDSRL 240

Query: 241 KSREDHDRKDEKRLRRHDLDGNPDPKSGD-----DHYKR-EEKRSRRHDLDGNPDPKSGV 300
           +   D   KD  R R    D +P+   GD     D Y +  +++S R+        +S V
Sbjct: 241 R-HSDRGSKDHDRYRH---DRSPERSRGDRQRNNDRYAQGRDEKSERY--------RSEV 299

Query: 301 DHYKREEKGPRRNHDDNRKDEKR 313
            H + ++K  RR+ D +   E+R
Sbjct: 301 KHDEGDQKRSRRDTDSSGHYERR 299

[Close]

BLAST of PI0018174 vs. ExPASy Swiss-Prot
Match: Q9SD61 (Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN=At3g47120 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.6e-57
Identity = 176/382 (46.07%), Postives = 215/382 (56.28%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AF+AYEDQRST LAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRG-MCETSY--YRAANTGWGAAEDA 180
           EDEE  ++  +       F+               RG  C+ S+   RAANTGWG  ED 
Sbjct: 121 EDEETRRQNREARGVCRAFQ----------RGECTRGDSCKFSHDEKRAANTGWGHEEDR 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRE----TIGSLRQENKPKGWDDSKES 240
           SSKW HDK    +   +         GD       E    T G   +E++   WD  K +
Sbjct: 181 SSKWDHDKNREGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLN 240

Query: 241 GLKSREDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSR-RHDLD---GNPDPKSGV 300
           G K                   G      GD     EEK  R R D D   G P  +  V
Sbjct: 241 GAKK-----------------GGTSFGNRGDFKPDVEEKSYRGRGDGDASYGRPKERERV 300

Query: 301 DHYKREEKGPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQ-HS 360
           D   RE+ GPR     + K++KR  ++D+    +  D+     E++  R QD E  +  S
Sbjct: 301 D---REDMGPRSRDAYDMKEQKRSGRYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAES 352

Query: 361 RRDYNTREE-DRSSKRHGNEER 370
           RRD N REE DR S R  +  R
Sbjct: 361 RRDRNDREEKDRDSLRREDRRR 352

[Close]

BLAST of PI0018174 vs. ExPASy Swiss-Prot
Match: Q9Y388 (RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2)

HSP 1 Score: 173.3 bits (438), Expect = 5.7e-42
Identity = 76/126 (60.32%), Postives = 105/126 (83.33%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++++ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVADKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR IRVDHVS Y+  ++
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVDHVSNYRAPKD 120

Query: 121 EDEEEE 127
            +E ++
Sbjct: 121 SEEIDD 126

[Close]

BLAST of PI0018174 vs. ExPASy Swiss-Prot
Match: Q8R0F5 (RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.5e-34
Identity = 112/348 (32.18%), Postives = 166/348 (47.70%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YK SA++FVGG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR IRVDHVS Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGMCETSYYRAANTGWGAAEDASSK 180
            ++ +                       D    +    C      ++       EDA   
Sbjct: 121 SEDVD-----------------------DVTRELQEKGCGVKTPPSSPPEVSEDEDAKLT 180

Query: 181 WGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDD------SKESG 240
             H K    K   K+   +G+   +        T+   + E   +           K   
Sbjct: 181 KKHKKDKKEKKKRKKEKTEGQAQAEQPSCSRSATVKEKKDERASRKHSSKTSERAQKSEH 240

Query: 241 LKSREDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKR 300
            +S++ H    + R   H    +P+ K+  +  K E K + R + +     +        
Sbjct: 241 RESKKSHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRERER-GRSSG 300

Query: 301 EEKGPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDN 343
              G  R H D R    R R    D         +R ++ R+ R +D+
Sbjct: 301 THSGRHRGHSDGRSHRSRSRSRSPDKS-------HRHKKYRHSRERDS 317

[Close]

BLAST of PI0018174 vs. ExPASy Swiss-Prot
Match: B0BN49 (RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=2 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.6e-31
Identity = 129/403 (32.01%), Postives = 188/403 (46.65%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK I ++N +E  LG++E+ SWH++YKDSA++F+GG+PY+LTEGD++ VF+QYG
Sbjct: 1   MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKDSAWIFLGGLPYELTEGDIICVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIV++NL+RDK TGKSKG+ F+ YEDQRST LAVDN NG +I GR IRVDHV+ Y+  +E
Sbjct: 61  EIVNINLVRDKKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVANYRAPQE 120

Query: 121 EDE------EEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGMCETSYYRAANTGWGAA 180
            ++      E ++KG   G    P     V  + DA                        
Sbjct: 121 SEDVDDVTRELQEKG--CGAKTPPSSPPEVSEDEDAK----------------------- 180

Query: 181 EDASSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESG 240
              + K   DK + +K  +KE             +  R     L   ++ K     KE+ 
Sbjct: 181 --VTKKPKKDKKEKKKKKEKE-------------KTERPVQAELPSCSRSK---TVKETD 240

Query: 241 LKSREDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKR 300
            +S + H  K  +R                   ++ E R R+    G+PD ++       
Sbjct: 241 EQSAKKHSSKPSERA------------------QKSECRERKKSHSGSPDGRTSC----- 300

Query: 301 EEKGPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNT 360
             +G     +   K EK   +H      + E+    K+  R           HS R +  
Sbjct: 301 --RGRAEEPEWEAKKEKHKHEHKPSSRREGEEKSRDKDRGR-------SSGTHSSRHHGH 328

Query: 361 REEDRSSKRHGNEERERDISVRHRSE--SHRRE--NPDEKRDY 394
            E      R  +  R  D S RH+    SH RE  +  ++R Y
Sbjct: 361 SEGRSHRSRSRSRSRSPDRSHRHKKHRYSHERESFHASDRRHY 328

[Close]

BLAST of PI0018174 vs. ExPASy TrEMBL
Match: A0A0A0KZW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1)

HSP 1 Score: 582.4 bits (1500), Expect = 1.5e-162
Identity = 331/430 (76.98%), Postives = 347/430 (80.70%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEEEQK  +       F+               RG  C+ S+   RAA+TGWGAAEDA
Sbjct: 121 EDEEEEQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAADTGWGAAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFD RKNHDKELHAKGRK  D+LGRHPRET GSLRQEN+P+GWDDSKES LKS
Sbjct: 181 SSKWGHDKFDSRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKS 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH  KDEKR RR+DLDGN DPKSGDD YK EEKRS                       
Sbjct: 241 REDHGGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRS----------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
              RNHDDNRKDEKR RKHD+DDEMK+EDD YRKEENRYRRNQDNELPQHSRRDY TREE
Sbjct: 301 --SRNHDDNRKDEKRSRKHDNDDEMKLEDDRYRKEENRYRRNQDNELPQHSRRDYKTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 417
           DRSSKRHG++E           RERD+SVRHRSES+RRENPDEKRDYRSSHGGRDSSSHS
Sbjct: 361 DRSSKRHGDKEYPPKLREDDKRRERDVSVRHRSESYRRENPDEKRDYRSSHGGRDSSSHS 395

[Close]

BLAST of PI0018174 vs. ExPASy TrEMBL
Match: A0A5D3CVY9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00620 PE=4 SV=1)

HSP 1 Score: 577.0 bits (1486), Expect = 6.3e-161
Identity = 330/430 (76.74%), Postives = 346/430 (80.47%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEEEQK  +       F+               RG  C+ S+   RAANTGWGAAEDA
Sbjct: 121 EDEEEEQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAANTGWGAAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFD R NHDKEL AKGRKN DDLGRHPRET GSLRQEN+PKGWDDSK S LK 
Sbjct: 181 SSKWGHDKFDSRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKP 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH R+DEKR RR+DLDGNPDPK GDD YKREEKRS R+                    
Sbjct: 241 REDHWRRDEKRSRRYDLDGNPDPKLGDDRYKREEKRSTRN-------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
                +DDNRKDEKR RKHD+D+EMK+EDD YRKEENRYRRNQDNELPQHSRR+YNTREE
Sbjct: 301 ---HEYDDNRKDEKRSRKHDNDEEMKLEDDRYRKEENRYRRNQDNELPQHSRRNYNTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 417
           DRSSKRHG+EE           RERDISVRHRSESHRRENP+EKRD+RSSHGGRDSSSHS
Sbjct: 361 DRSSKRHGDEEYQPKLGEDDKRRERDISVRHRSESHRRENPNEKRDFRSSHGGRDSSSHS 397

[Close]

BLAST of PI0018174 vs. ExPASy TrEMBL
Match: A0A5A7TUW9 (Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00260 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 6.9e-160
Identity = 331/430 (76.98%), Postives = 343/430 (79.77%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEE+QK  +       F+               RG  C+ S+   RAA+TGWG AEDA
Sbjct: 121 EDEEEQQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAADTGWGVAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFDGRKN +KEL AKGRKN D+LGRHPRET GSLRQEN+ KG DDSKES LKS
Sbjct: 181 SSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKS 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH  KDEKR RR+DLDGNPDPKSGDDHYKREEKRS                       
Sbjct: 241 REDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRS----------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
             RRNHDDNRKDEKR RKHDDDDEMK EDD YRKEENRYRRNQDNELPQHSRRDYNTREE
Sbjct: 301 --RRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 417
           DRSSKRHG+ E           RERDISVRHRSESHRRENPDEKRDY SS GGRDSSSHS
Sbjct: 361 DRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHS 395

[Close]

BLAST of PI0018174 vs. ExPASy TrEMBL
Match: A0A1S3BLJ3 (zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 6.9e-160
Identity = 331/430 (76.98%), Postives = 343/430 (79.77%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEE+QK  +       F+               RG  C+ S+   RAA+TGWG AEDA
Sbjct: 121 EDEEEQQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAADTGWGVAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFDGRKN +KEL AKGRKN D+LGRHPRET GSLRQEN+ KG DDSKES LKS
Sbjct: 181 SSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKS 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH  KDEKR RR+DLDGNPDPKSGDDHYKREEKRS                       
Sbjct: 241 REDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRS----------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
             RRNHDDNRKDEKR RKHDDDDEMK EDD YRKEENRYRRNQDNELPQHSRRDYNTREE
Sbjct: 301 --RRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 417
           DRSSKRHG+ E           RERDISVRHRSESHRRENPDEKRDY SS GGRDSSSHS
Sbjct: 361 DRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHS 395

[Close]

BLAST of PI0018174 vs. ExPASy TrEMBL
Match: A0A1S3BLK5 (zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491164 PE=4 SV=1)

HSP 1 Score: 572.8 bits (1475), Expect = 1.2e-159
Identity = 329/425 (77.41%), Postives = 341/425 (80.24%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEE+QK  +       F+               RG  C+ S+   RAA+TGWG AEDA
Sbjct: 121 EDEEEQQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAADTGWGVAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFDGRKN +KEL AKGRKN D+LGRHPRET GSLRQEN+ KG DDSKES LKS
Sbjct: 181 SSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKS 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH  KDEKR RR+DLDGNPDPKSGDDHYKREEKRS                       
Sbjct: 241 REDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRS----------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
             RRNHDDNRKDEKR RKHDDDDEMK EDD YRKEENRYRRNQDNELPQHSRRDYNTREE
Sbjct: 301 --RRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 412
           DRSSKRHG+ E           RERDISVRHRSESHRRENPDEKRDY SS GGRDSSSHS
Sbjct: 361 DRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHS 390

[Close]

BLAST of PI0018174 vs. NCBI nr
Match: XP_004147921.1 (zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypothetical protein Csa_018037 [Cucumis sativus])

HSP 1 Score: 582.4 bits (1500), Expect = 3.1e-162
Identity = 331/430 (76.98%), Postives = 347/430 (80.70%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEEEQK  +       F+               RG  C+ S+   RAA+TGWGAAEDA
Sbjct: 121 EDEEEEQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAADTGWGAAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFD RKNHDKELHAKGRK  D+LGRHPRET GSLRQEN+P+GWDDSKES LKS
Sbjct: 181 SSKWGHDKFDSRKNHDKELHAKGRKTSDNLGRHPRETSGSLRQENRPRGWDDSKESELKS 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH  KDEKR RR+DLDGN DPKSGDD YK EEKRS                       
Sbjct: 241 REDHGGKDEKRSRRYDLDGNSDPKSGDDQYKGEEKRS----------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
              RNHDDNRKDEKR RKHD+DDEMK+EDD YRKEENRYRRNQDNELPQHSRRDY TREE
Sbjct: 301 --SRNHDDNRKDEKRSRKHDNDDEMKLEDDRYRKEENRYRRNQDNELPQHSRRDYKTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 417
           DRSSKRHG++E           RERD+SVRHRSES+RRENPDEKRDYRSSHGGRDSSSHS
Sbjct: 361 DRSSKRHGDKEYPPKLREDDKRRERDVSVRHRSESYRRENPDEKRDYRSSHGGRDSSSHS 395

[Close]

BLAST of PI0018174 vs. NCBI nr
Match: TYK15418.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 577.0 bits (1486), Expect = 1.3e-160
Identity = 330/430 (76.74%), Postives = 346/430 (80.47%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEEEQK  +       F+               RG  C+ S+   RAANTGWGAAEDA
Sbjct: 121 EDEEEEQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAANTGWGAAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFD R NHDKEL AKGRKN DDLGRHPRET GSLRQEN+PKGWDDSK S LK 
Sbjct: 181 SSKWGHDKFDSRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGWDDSKGSELKP 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH R+DEKR RR+DLDGNPDPK GDD YKREEKRS R+                    
Sbjct: 241 REDHWRRDEKRSRRYDLDGNPDPKLGDDRYKREEKRSTRN-------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
                +DDNRKDEKR RKHD+D+EMK+EDD YRKEENRYRRNQDNELPQHSRR+YNTREE
Sbjct: 301 ---HEYDDNRKDEKRSRKHDNDEEMKLEDDRYRKEENRYRRNQDNELPQHSRRNYNTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 417
           DRSSKRHG+EE           RERDISVRHRSESHRRENP+EKRD+RSSHGGRDSSSHS
Sbjct: 361 DRSSKRHGDEEYQPKLGEDDKRRERDISVRHRSESHRRENPNEKRDFRSSHGGRDSSSHS 397

[Close]

BLAST of PI0018174 vs. NCBI nr
Match: XP_008449221.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo] >KAA0045039.1 zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 573.5 bits (1477), Expect = 1.4e-159
Identity = 331/430 (76.98%), Postives = 343/430 (79.77%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEE+QK  +       F+               RG  C+ S+   RAA+TGWG AEDA
Sbjct: 121 EDEEEQQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAADTGWGVAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFDGRKN +KEL AKGRKN D+LGRHPRET GSLRQEN+ KG DDSKES LKS
Sbjct: 181 SSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKS 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH  KDEKR RR+DLDGNPDPKSGDDHYKREEKRS                       
Sbjct: 241 REDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRS----------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
             RRNHDDNRKDEKR RKHDDDDEMK EDD YRKEENRYRRNQDNELPQHSRRDYNTREE
Sbjct: 301 --RRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 417
           DRSSKRHG+ E           RERDISVRHRSESHRRENPDEKRDY SS GGRDSSSHS
Sbjct: 361 DRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHS 395

[Close]

BLAST of PI0018174 vs. NCBI nr
Match: XP_008449231.1 (PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumis melo])

HSP 1 Score: 572.8 bits (1475), Expect = 2.4e-159
Identity = 329/425 (77.41%), Postives = 341/425 (80.24%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRI+RVDH SKYKKKEE
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIVRVDHASKYKKKEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGM-CETSY--YRAANTGWGAAEDA 180
           EDEEE+QK  +       F+               RG  C+ S+   RAA+TGWG AEDA
Sbjct: 121 EDEEEQQKKREARGVCRAFQ----------RGECTRGAGCKFSHDEQRAADTGWGVAEDA 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGWDDSKESGLKS 240
           SSKWGHDKFDGRKN +KEL AKGRKN D+LGRHPRET GSLRQEN+ KG DDSKES LKS
Sbjct: 181 SSKWGHDKFDGRKNDNKELRAKGRKNSDNLGRHPRETSGSLRQENRLKGCDDSKESELKS 240

Query: 241 REDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKSGVDHYKREEK 300
           REDH  KDEKR RR+DLDGNPDPKSGDDHYKREEKRS                       
Sbjct: 241 REDHGEKDEKRSRRYDLDGNPDPKSGDDHYKREEKRS----------------------- 300

Query: 301 GPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQHSRRDYNTREE 360
             RRNHDDNRKDEKR RKHDDDDEMK EDD YRKEENRYRRNQDNELPQHSRRDYNTREE
Sbjct: 301 --RRNHDDNRKDEKRSRKHDDDDEMKSEDDRYRKEENRYRRNQDNELPQHSRRDYNTREE 360

Query: 361 DRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSSHGGRDSSSHS 412
           DRSSKRHG+ E           RERDISVRHRSESHRRENPDEKRDY SS GGRDSSSHS
Sbjct: 361 DRSSKRHGDGEYPPKLREDDKRRERDISVRHRSESHRRENPDEKRDYWSSQGGRDSSSHS 390

[Close]

BLAST of PI0018174 vs. NCBI nr
Match: KAA0061838.1 (zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 560.5 bits (1443), Expect = 1.3e-155
Identity = 322/440 (73.18%), Postives = 335/440 (76.14%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG
Sbjct: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQI                  
Sbjct: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQI------------------ 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRGMCETS-------------YYRAA 180
                      LGVFVVPFKGVNVL EL ANSPMM  M                 + RAA
Sbjct: 121 -----------LGVFVVPFKGVNVLAELVANSPMMSSMLRLELHFKKFDAWRLFVFQRAA 180

Query: 181 NTGWGAAEDASSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRETIGSLRQENKPKGW 240
           NTGWGAAEDASSKWGHDKFD R NHDKEL AKGRKN DDLGRHPRET GSLRQEN+PKGW
Sbjct: 181 NTGWGAAEDASSKWGHDKFDSRTNHDKELRAKGRKNSDDLGRHPRETSGSLRQENRPKGW 240

Query: 241 DDSKESGLKSREDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSRRHDLDGNPDPKS 300
           DDSK S LK REDH R+DEKR RR+DLDGNPDPK GDD YKREEKRS R+          
Sbjct: 241 DDSKGSELKPREDHWRRDEKRSRRYDLDGNPDPKLGDDRYKREEKRSTRN---------- 300

Query: 301 GVDHYKREEKGPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQH 360
                          +DDNRKDEKR RKHD+D+EMK+EDD YRKEENRYRRNQDNELPQH
Sbjct: 301 -------------HEYDDNRKDEKRSRKHDNDEEMKLEDDRYRKEENRYRRNQDNELPQH 360

Query: 361 SRRDYNTREEDRSSKRHGNEE-----------RERDISVRHRSESHRRENPDEKRDYRSS 417
           SRR+YNTREEDRSSKRHG+EE           RERDISVRHRSESHRRENP+EKRD+RSS
Sbjct: 361 SRRNYNTREEDRSSKRHGDEEYQPKLGEDDKRRERDISVRHRSESHRRENPNEKRDFRSS 388

[Close]

BLAST of PI0018174 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 224.9 bits (572), Expect = 1.2e-58
Identity = 176/382 (46.07%), Postives = 215/382 (56.28%), Query Frame = 0


Query: 1   MNPLTLVKRIQKINSQEAALGISEEASWHAKYKDSAYVFVGGIPYDLTEGDLLAVFAQYG 60
           MNPLT VK +QKIN++E+ LGIS+EASWHAKYK+SAYV+VGGIP+DLTEGDLLAVF+QYG
Sbjct: 1   MNPLTQVKNLQKINARESDLGISDEASWHAKYKNSAYVYVGGIPFDLTEGDLLAVFSQYG 60

Query: 61  EIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVSKYKKKEE 120
           EIVDVNLIRDKGTGKSKG+AF+AYEDQRST LAVDNLNGA +LGR I+VDH   YKK EE
Sbjct: 61  EIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNLNGALVLGRTIKVDHCGAYKKHEE 120

Query: 121 EDEEEEQKGGKLGVFVVPFKGVNVLVELDANSPMMRG-MCETSY--YRAANTGWGAAEDA 180
           EDEE  ++  +       F+               RG  C+ S+   RAANTGWG  ED 
Sbjct: 121 EDEETRRQNREARGVCRAFQ----------RGECTRGDSCKFSHDEKRAANTGWGHEEDR 180

Query: 181 SSKWGHDKFDGRKNHDKELHAKGRKNGDDLGRHPRE----TIGSLRQENKPKGWDDSKES 240
           SSKW HDK    +   +         GD       E    T G   +E++   WD  K +
Sbjct: 181 SSKWDHDKNREGRGVCRAFQRGECTRGDSCKFSHDEKRAATTGWGHEEDRSSKWDQDKLN 240

Query: 241 GLKSREDHDRKDEKRLRRHDLDGNPDPKSGDDHYKREEKRSR-RHDLD---GNPDPKSGV 300
           G K                   G      GD     EEK  R R D D   G P  +  V
Sbjct: 241 GAKK-----------------GGTSFGNRGDFKPDVEEKSYRGRGDGDASYGRPKERERV 300

Query: 301 DHYKREEKGPRRNHDDNRKDEKRLRKHDDDDEMKIEDDCYRKEENRYRRNQDNELPQ-HS 360
           D   RE+ GPR     + K++KR  ++D+    +  D+     E++  R QD E  +  S
Sbjct: 301 D---REDMGPRSRDAYDMKEQKRSGRYDNAYSRRHNDEIDYVREDKGSRAQDWEKRKAES 352

Query: 361 RRDYNTREE-DRSSKRHGNEER 370
           RRD N REE DR S R  +  R
Sbjct: 361 RRDRNDREEKDRDSLRREDRRR 352

[Close]

BLAST of PI0018174 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-12
Identity = 33/105 (31.43%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 11  QKINSQ-EAALGISEEASWHA-KYKDSAYVFVGGIPYDLTEGDLLAVFAQYGEIVDVNLI 70
           Q  N Q  A + +S  + + A +   S+ +F+GG+ Y + E  L   F +YGE+VD  +I
Sbjct: 13  QTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAFTKYGEVVDTRVI 72

Query: 71  RDKGTGKSKGYAFVAYEDQRSTNLAVDNLNGAQILGRIIRVDHVS 114
            D+ TG+S+G+ FV +    + + A+  L+G  + GR+++V++ +
Sbjct: 73  LDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYAN 117

[Close]

BLAST of PI0018174 vs. TAIR 10
Match: AT4G39260.1 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-11
Identity = 25/72 (34.72%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 39  FVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLN 98
           FVGG+ +   + DL   F+Q+G+++D  +I D+ +G+S+G+ FV ++D+++   A++ +N
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 99  GAQILGRIIRVD 111
           G ++ GR+I V+
Sbjct: 69  GKELDGRVITVN 80

[Close]

BLAST of PI0018174 vs. TAIR 10
Match: AT4G39260.2 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-11
Identity = 25/72 (34.72%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 39  FVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLN 98
           FVGG+ +   + DL   F+Q+G+++D  +I D+ +G+S+G+ FV ++D+++   A++ +N
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 99  GAQILGRIIRVD 111
           G ++ GR+I V+
Sbjct: 69  GKELDGRVITVN 80

[Close]

BLAST of PI0018174 vs. TAIR 10
Match: AT4G39260.3 (cold, circadian rhythm, and RNA binding 1 )

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-11
Identity = 25/72 (34.72%), Postives = 51/72 (70.83%), Query Frame = 0


Query: 39  FVGGIPYDLTEGDLLAVFAQYGEIVDVNLIRDKGTGKSKGYAFVAYEDQRSTNLAVDNLN 98
           FVGG+ +   + DL   F+Q+G+++D  +I D+ +G+S+G+ FV ++D+++   A++ +N
Sbjct: 9   FVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMN 68

Query: 99  GAQILGRIIRVD 111
           G ++ GR+I V+
Sbjct: 69  GKELDGRVITVN 80

The following BLAST results are available for this feature:

BLAST of PI0018174 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10B98	3.2e-61	49.54	Zinc finger CCCH domain-containing protein 25 OS=Oryza sativa subsp. japonica OX...	[more]
Q9SD61	1.6e-57	46.07	Zinc finger CCCH domain-containing protein 42 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9Y388	5.7e-42	60.32	RNA-binding motif protein, X-linked 2 OS=Homo sapiens OX=9606 GN=RBMX2 PE=1 SV=2	[more]
Q8R0F5	2.5e-34	32.18	RNA-binding motif protein, X-linked 2 OS=Mus musculus OX=10090 GN=Rbmx2 PE=1 SV=...	[more]
B0BN49	2.6e-31	32.01	RNA-binding motif protein, X-linked 2 OS=Rattus norvegicus OX=10116 GN=Rbmx2 PE=...	[more]

BLAST of PI0018174 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZW7	1.5e-162	76.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308540 PE=4 SV=1	[more]
A0A5D3CVY9	6.3e-161	76.74	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A5A7TUW9	6.9e-160	76.98	Zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo va...	[more]
A0A1S3BLJ3	6.9e-160	76.98	zinc finger CCCH domain-containing protein 25-like isoform X1 OS=Cucumis melo OX...	[more]
A0A1S3BLK5	1.2e-159	77.41	zinc finger CCCH domain-containing protein 25-like isoform X2 OS=Cucumis melo OX...	[more]

BLAST of PI0018174 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004147921.1	3.1e-162	76.98	zinc finger CCCH domain-containing protein 25 [Cucumis sativus] >KGN54364.1 hypo...	[more]
TYK15418.1	1.3e-160	76.74	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]
XP_008449221.1	1.4e-159	76.98	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumi...	[more]
XP_008449231.1	2.4e-159	77.41	PREDICTED: zinc finger CCCH domain-containing protein 25-like isoform X2 [Cucumi...	[more]
KAA0061838.1	1.3e-155	73.18	zinc finger CCCH domain-containing protein 25-like isoform X1 [Cucumis melo var....	[more]

BLAST of PI0018174 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47120.1	1.2e-58	46.07	RNA recognition motif (RRM)-containing protein	[more]
AT5G61030.1	2.1e-12	31.43	glycine-rich RNA-binding protein 3	[more]
AT4G39260.1	1.1e-11	34.72	cold, circadian rhythm, and RNA binding 1	[more]
AT4G39260.2	1.1e-11	34.72	cold, circadian rhythm, and RNA binding 1	[more]
AT4G39260.3	1.1e-11	34.72	cold, circadian rhythm, and RNA binding 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 37..110 e-value: 1.8E-26 score: 103.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 38..107 e-value: 2.3E-21 score: 75.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 36..114 score: 19.979433
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 26..131 e-value: 2.7E-30 score: 106.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..416
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..416
None	No IPR available	PANTHER	PTHR45880	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..321
None	No IPR available	PANTHER	PTHR45880:SF1	RNA-BINDING MOTIF PROTEIN, X-LINKED 2	coord: 1..321
None	No IPR available	CDD	cd12411	RRM_ist3_like	coord: 27..113 e-value: 2.57778E-57 score: 180.912
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 27..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0018174.1	PI0018174.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0071011	precatalytic spliceosome
cellular_component	GO:0005686	U2 snRNP
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding