PI0018025 (gene) Melon (PI 482460) v1

Overview
NamePI0018025
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Descriptioncold shock domain-containing protein 3-like
Locationchr07: 6168989 .. 6174947 (+)
RNA-Seq ExpressionPI0018025
SyntenyPI0018025
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACTCTACGCAGTGGCGGACCGCAGCTGAAGTTATATCCCTAGTCAATAAAGTCAGAAATATCCCTAAGCCTACCATCGATCTGCCAAAAATGCCGTTGCGGAGGTTTCGCATAAAGTTCCCCGTAATGCAGACTCTGTAGGGATCACCCCTTTGAAAGGAAACCCTGTTCTCCCTCAAGTTTCGGGTTCGAAAGCCAATTCTGACAACAATGTATCCATTTCTGCAAATACTACTGCTCAATCGGAAGGCGGTGGTTCCTGTTTCAAATGCGGGAAATTAGGGCATTGGGCTAGAGACTGCGATGCTCCGGGTGGTGGAGGATCTTTCAGTTCTTCAGGAAATGATACGCCAGTTGCGGAGAAAGCATGCCCCTGCGGATTGGGAATTTGTTCAGTACTAACTGCGAAAACGGATAGGAATCGCGGTCGAAAATTTTACGCATGCCCCGTTCGGCAGGTGTTGAGGGAAACTGTCTTCATCTTTTTCTTTTTTGTTTGATAGTATCATTTCTTCTTCTTTCCTAATTATCGCCACTTTTTAAGTCATAATGTTGCCGCGTAAACTTGGAAATGGAAGAGCGATTTCGAGTTCTGATGAAGTCATGTCTTTTTTCATCTGGCTGATGTTGGGTTTTGTGAAAAATATATAAACATCTATTAAGAACCTCGAGAAAGATATTGATGTTACTTAAACCTTTGTTATAATCACCTAGAAATTAAATTAGTAATGTGTAATGTAATGCTGCGATGGATCATATAATTTTTGTTGATTAAAACATACTTGTTCTTTAACCAACTGGGTCTAATAGATTCGAGTACTAGTACCCTGTCAAAAAATTTGTGGAAGTACCTTATTAAACTCTAAAGTTTGTTATTATCATTTTGAATTCAAAGCTCATTAAATTATTTCTGTGCGCAATAACTTTTATCATCACATGGTAATATACCATGACTTTACTTTCTTCTCATGTACATTCAATTGTTCTCAGGAAAATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAGTGCCCCTGTAACTAATCTAATGACTTATGGAAGCCAAAATCCATCAAGTTCGTCATTTCCAGACCTTCAGTGCCCCTGTGGTGCTGGTTCTTGCAGAATTCTAACAGCTAAAACAGTGGAAAACGTTGGGAAGCAGTTCTATCGTTGCCCTTCATTCCAGGTAATTTTTATAACACAAATGTTTGTGCAGCAGCTTTTATTGTCTTGTGATGACGTGATTCTCAAAACTGTTTGTTCACGATTAAGGGTCATAGCTTCTCTTACCTTATTACAAAGTGGAAACATCTTTTGTATTCCCTTCAGTTGAGACTCTTTTGTATACCATTGGATGTTTCATCAATCTATGCAATAGTTTCTTATCTAAAGAAACAAATTTCGGTTGCTGAATTTTCATTTTCATATCAAGAAGTCATGGACCATCCAATTATCTGACTGACAACTGTGGGAAAGCTTCTGAAGTGTGTATGCATTTGACTCTTCATTCTGACTGGTTGGAAGAAAATAAAATTTGCTCTGATACCGTGGCTAAGTGCTTCTCATTTATTCTTCTCATTCTTCCGAATTTAATTTAGAGTACCAATTTTATGACTTTACATCTTTAGATCAATTGATGGTGCTGGAAGTTGCAAAGTATGGCCTTGAAGGTGGGCGAAATTATTGCAAACAATTAGATAGTCGCCAATTACTCTGCATAATTATTAAATGAGTGAAGCTTATAAAGAGGGATGTTATAGTTGCATTATGAACGGAAAGAAAGCAGGGAAAAGAACCAATGCATGTGCGTGCAGTATATAATAAGAATTTTCTTAGTGAAGTTTCGGAGAGGACCTTTATCAAGGAAAACACAGCTCTAGATCTTTTAAGCCAAGGTATCTGAACAAAGTTTCTGAGACGACTTTTATCTAGGAAAACACTAATGAGTCCGTGTTACGCAATTTAGAGCACAATCAAGAGCAAATTAATTTAATTCCAACTCTACGTAAAATTAGTTGAAGAATGTAAGGTCTTTGATCTGAATACCTACCAGAAAATTAGTCAATGGGACTGGGAGATGATGTACAATTGTTGGGCATGAGTGTGTATGTAGGTCTTTAAGGGTCAGATTCTGTTTCGGGCAGGGGTATGGTATTTTTGTAGTTGAATACTGTTCTAAGGTTTAGGATAGTTTCTTTAATTGGATGGGTTTGCATTTTTGTTTGTTTTTCAACGTTGCTATTGTTTCCTCAACTTACATTTCAATGAAATAGTGAGGGAGAGAATTAGTGGATTGTCGTTCTGTAGTTTTTCTCCCTGCCTTTTAGATGGTTGGGATACTTCACTAATTACTCCTCGATATGAGAAATTTCATGTTCAATTATGCATAGCACTATGTTATGAACTAAGAAGCACCAACACTCCTAACATGGCCGAGTATCGGTGTTGGACACGTTTCCGACACCGACACGCCAATTGGCGTGTCAAATTTTTTTAAAAAAATTTTTTGGACACGGCCCAGACACAGGAAGCCCAGAAATGGCCCAATTGCATAATTATTTAGGTTTTTTTTTTAAATTTCCTTTTCTTCTTCACGATCTCACGGTCTCTTTTCACAATCTCACTATCCCTCTCGACTCTCTCTGTCTTCTCCGATTCTCCCAAGTCCCACCATCCGTCGCATTGAAGCTCTCGCCAGTTGCCGTCGTTTTCCGTCTCTCTCCTAGTCGCTGTCGCCACCATCTCTGCCCATTTCTGTCGAGTTTTCCAAGACCCAAAGTTTGTGTCTGCCTCCCTTCTTTTATTTTTTATTTTTTCTTTTCTTGCTTTGTGGTTGGACCAACTTATTGATTTAGTTTGGCTGGAAGTGACAGTGGACATTGTTGAATGTTGGGTTTACTGTTTATGTTTATCATATGATTTTTTTTCCATTAAATCTTATTTGGTTATTTTTCTGTTTTTATTTTAAATTTAGTAGGGTAGAATCATCTTTAAGTCATACCGAAATTAATTCAAGAATGACTATCGAGGATGATACAAAACTGTTATGGCAGTATGTGACAAAACATGAAAGGTTGAGTGGTGGAGGAGGGGATTTTGCTTGGCAATGTAATTTTTGTCAAGAAAGGAGGAAAATGTCTTACATAAGAGTTAGGGCACATCTACTAAAAATGGTTGGATTTGGGATTGGGGTATGTAGGAAGGTCACTCCTAAAGATCTTGTTGACATGCAAATGTTGGAAGAGGAATCTAAAGTTCGTGTTGCAAACAATGCTCCTAAGCAAGTTCCATTACCACCTTCACGATATATGCAAGTTGAATCTCAATCTTTTGGATCGGGAAGCATGGGCAGCTATTCATATTCCTTTTCACCAATGGAACAAAAGAAAAGGAAAGGAAATGTTAGTGGTCTTGAGAAGTCCTTTAACTTGGCACTTCGTGATTAAGTAGATTCAGAGATAACTAGAATGTTTTATTCTTCAGGCCTTTCTATTTGGCTAGAAATCCACATTATGTAAATGTCTTTGCTTTGGTTGCAAATAATTCTTTGTCAGGTTATTTACCTTTGGGGTATCATAAATTAAGAACAAGTCTTCTTCAAAGAGAAAGAACAAATGTCGAGAGATTGTTGCAACCTATTAAAACTACATAGTTTGCAAAAGGAGTAAGTATTATCTTCGATGGATGGAGTGATTCACAAAGGAGACGATTGATTAACTTTATGGTAGTTACAGAAAGGGGACCAATGTTTCTTAAAGCTGTAGATTGCTCAGGTGAGATAAAGGATAAATATTTCATAGCAAATCTGATGAAAGAAGTCATAAATGAGTTGAGACACGAGAATGTGAATCAAATAATCACTGACAATGCTGCAAATTGTCAAGGTGCAGGGCAAATTATTGAATCACAGTTTCCTAACATAGTTTGGACATCATGTGTAGTTCATACCCTTAATCTTGCCTTGAAGAACATATGTGCTGCAAGAAACATTGATAGTAATCAACATGTATTTGCATAGTGCAGTTGGATTTCTGGAATTTCTGATAGTGTTATGTTTATCAAATACTTTATCATGAATCATTCGATGAGACTAGCTATGTTCAATGAGTTTATGTCTTTAAAGTTACTTGTAGTAGGAGAAACACGATTCACATCTACCATCATGCTTAAAAGATTTAAACTTATTAAGGGTGGTTTGCAAACAATGGTTAGTGGGGATGCTACAGAGAAGATGATACGGTGAAAGCAAGACATGTAAAGGAGTTGGTGCTTGATGATATTTGGTGGGATAAGATTGATTATATCCTTTCTTTTATTGCTCCTATTTATGATATGATCAAAACTTGTGATACGAAGAGTTTTCATCTTTTTATAACGTGGTGCATCGAATTTTGATTGATCGACGGAATAAAAATAACACCTCTCTCCATTGTTTGGTCCATTCTCTAAATCCAAGGTATTCATCTTAGATCTTTATTTTATTTTTTCAATTTCTAAACACACCCTAAAATTTGGTCCATTTTAAAATAAGTTTTTTTCAAGAATAATAAATAAATACAAACTATTTACACTTTATGGCAAAATCAAGTGTAATGAGTTTCTGTCCTTTAGTGGTTTTTTGCCATTTTTGACAATTCCCCTTTTAAAATTTTATTTAGGTATTATAGTGCACAATGGCTTCAAGAAGACAAGTCTCTAGTCCCACCACATTAAGACTTAGAAGTAGCAAGAGAGAGGATGAAGTGTATTAAGAAATATTTCAGTTTAAGGGATGAGAGAACAAAAGTGAACATTGAATTTGTCAAATTTTCTACAATGTCTGAACAATTTGCTGATCATGAATCCATACGAATTAGATATGACATGCCTCCAAAGAGTTGGTAGACCATCCATGGTGCCTTTACTCCAACTTTACAGTCACTAGCTATGAAGTTACTGATTCAACCTTCATCCTCCTCGTGATGTGAGAGAAATTGGAGTACATATTCATTTGTGCACTCTATGAGAAGAAACAAGATGACACCACAACGTGCAGAAGACTTGGTGTACATCTATAGCAATCTACGTCTTTTATCAAGAAGAATTCTTGAATATCTCAAAGAAGAGACAAAAATGTGAGACATTACTGGGGATTCATTTGAAGATGTGGGAATGCTTGGAGTGGCTAGTTTATCCTTGGATGAACGTGGTGAGGCTCAAGTTTAAGTTTGTTAAGGTTTAATGGTTCTAAATTTGTTAGTCTGATGTTTTTAATTGTAATCCTTGTTAGGTAATATGTTTATATGAATAACATATATTTAATTTTTTATTAAAAAATTGAGTGTCGTGTCCTACATTTTTTAAAAATGGCGTGTCGCCGTGTCACTTGTCAGTATCTATGCTTCTTAGGTTATGAAACCCTTCCAAGTTTATTCTTCTATGTTTACTTTATGTCCACCATGATCTATCTAGTTCCAACATCTCGTCAAATTTATACTTGTGTGGTAATGATAATTTCCGTCACCTCCCACATCTGGATGAGTCTCAACATCATGTCAACACAATTTTCTGAAAATGTTTTGATACTTGCAAATTGCATAAGTTATACAGTGGATTGATTTCCATGTTGTAATTCTTCATCTGTTGAACTCAAATCTATTCTGCAGGCACCTTGCGGGTTTTTCCAGTGGTGCAAAGATCCTTTCATGGAAACCGAGAATCAAGTGAGTGCCCCTAAGGCCTACGGTAACACAAATGACACGAGCAAAAGTGTTACAACGAATGTGAAAACTGGTTCTTCCAGTTCCTTCTATAAACATGGGGGTGAAGGGCATTCGGCTAAAGACTACTCGCAATCACTCTCATCATCAAATCCTCCTGCAGAATATGGCGGAAGTCAATCTTCTTCACTTGGAAGCTGTTTCAAATGTGGTAAGGCTGGCCATTGGGCGAAGGACTGCTCTAATTCTTAA

mRNA sequence

ATGAAGAACTCTACGCAGTGGCGGACCGCAGCTGAAGTTATATCCCTAGTCAATAAAGTCAGAAATATCCCTAAGCCTACCATCGATCTGCCAAAAATGCCGTTGCGGAGGTTTCGGATCACCCCTTTGAAAGGAAACCCTGTTCTCCCTCAAGTTTCGGGTTCGAAAGCCAATTCTGACAACAATGTATCCATTTCTGCAAATACTACTGCTCAATCGGAAGGCGGTGGTTCCTGTTTCAAATGCGGGAAATTAGGGCATTGGGCTAGAGACTGCGATGCTCCGGGTGGTGGAGGATCTTTCAGTTCTTCAGGAAATGATACGCCAGTTGCGGAGAAAGCATGCCCCTGCGGATTGGGAATTTGTTCAGTACTAACTGCGAAAACGGATAGGAATCGCGGTCGAAAATTTTACGCATGCCCCGTTCGGCAGGAAAATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAGTGCCCCTGTAACTAATCTAATGACTTATGGAAGCCAAAATCCATCAAGTTCGTCATTTCCAGACCTTCAGTGCCCCTGTGGTGCTGGTTCTTGCAGAATTCTAACAGCTAAAACAGTGGAAAACGTTGGGAAGCAGTTCTATCGTTGCCCTTCATTCCAGGCACCTTGCGGGTTTTTCCAGTGGTGCAAAGATCCTTTCATGGAAACCGAGAATCAAGTGAGTGCCCCTAAGGCCTACGGTAACACAAATGACACGAGCAAAAGTGTTACAACGAATGTGAAAACTGGTTCTTCCAGTTCCTTCTATAAACATGGGGGTGAAGGGCATTCGGCTAAAGACTACTCGCAATCACTCTCATCATCAAATCCTCCTGCAGAATATGGCGGAAGTCAATCTTCTTCACTTGGAAGCTGTTTCAAATGTGGTAAGGCTGGCCATTGGGCGAAGGACTGCTCTAATTCTTAA

Coding sequence (CDS)

ATGAAGAACTCTACGCAGTGGCGGACCGCAGCTGAAGTTATATCCCTAGTCAATAAAGTCAGAAATATCCCTAAGCCTACCATCGATCTGCCAAAAATGCCGTTGCGGAGGTTTCGGATCACCCCTTTGAAAGGAAACCCTGTTCTCCCTCAAGTTTCGGGTTCGAAAGCCAATTCTGACAACAATGTATCCATTTCTGCAAATACTACTGCTCAATCGGAAGGCGGTGGTTCCTGTTTCAAATGCGGGAAATTAGGGCATTGGGCTAGAGACTGCGATGCTCCGGGTGGTGGAGGATCTTTCAGTTCTTCAGGAAATGATACGCCAGTTGCGGAGAAAGCATGCCCCTGCGGATTGGGAATTTGTTCAGTACTAACTGCGAAAACGGATAGGAATCGCGGTCGAAAATTTTACGCATGCCCCGTTCGGCAGGAAAATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAGTGCCCCTGTAACTAATCTAATGACTTATGGAAGCCAAAATCCATCAAGTTCGTCATTTCCAGACCTTCAGTGCCCCTGTGGTGCTGGTTCTTGCAGAATTCTAACAGCTAAAACAGTGGAAAACGTTGGGAAGCAGTTCTATCGTTGCCCTTCATTCCAGGCACCTTGCGGGTTTTTCCAGTGGTGCAAAGATCCTTTCATGGAAACCGAGAATCAAGTGAGTGCCCCTAAGGCCTACGGTAACACAAATGACACGAGCAAAAGTGTTACAACGAATGTGAAAACTGGTTCTTCCAGTTCCTTCTATAAACATGGGGGTGAAGGGCATTCGGCTAAAGACTACTCGCAATCACTCTCATCATCAAATCCTCCTGCAGAATATGGCGGAAGTCAATCTTCTTCACTTGGAAGCTGTTTCAAATGTGGTAAGGCTGGCCATTGGGCGAAGGACTGCTCTAATTCTTAA

Protein sequence

MKNSTQWRTAAEVISLVNKVRNIPKPTIDLPKMPLRRFRITPLKGNPVLPQVSGSKANSDNNVSISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEKACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQNPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSAPKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSLGSCFKCGKAGHWAKDCSNS
Homology
BLAST of PI0018025 vs. ExPASy Swiss-Prot
Match: Q3MHN7 (Endonuclease 8-like 3 OS=Bos taurus OX=9913 GN=NEIL3 PE=2 SV=2)

HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06
Identity = 50/180 (27.78%), Postives = 71/180 (39.44%), Query Frame = 0

Query: 56  KANSDNNVSISANTTAQSEGGGSCFKCGKLGHWA----RDCDAPGGGGSFSSSGNDTP-- 115
           ++   + V+IS    +Q +      K  K  H++    + C+         SS  D P  
Sbjct: 441 RSQPSDKVNISPVVCSQYKLFSPAHKKLKTTHYSSPDLKSCNPGFSNSELQSSMTDGPCL 500

Query: 116 -------VAEKACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTN 175
                   ++   PC L +      K+  N+GR FYACP+ +E   CGFFEW D      
Sbjct: 501 LNAGSPRCSKHGRPCALRV----VRKSGENKGRHFYACPLARE-AQCGFFEWAD------ 560

Query: 176 LMTYGSQNPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCP-SFQAPCGFFQWCKD 222
                       SFP   C  G  S      K   N GK F+ CP   +  C FFQW ++
Sbjct: 561 -----------LSFP--FCNHGKRSIMRTVLKIGPNNGKNFFVCPLGKEKQCNFFQWAQN 596

BLAST of PI0018025 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.1e-05
Identity = 65/255 (25.49%), Postives = 93/255 (36.47%), Query Frame = 0

Query: 64  SISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEKAC-PCGLGIC 123
           S++    +    GG+CF CG++GH A+DCD   GG SF   G      E  C  CG    
Sbjct: 81  SLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCG---- 140

Query: 124 SVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQNPSSSSFPDLQCP 183
                          +A   RQ  GG          P  +    G             C 
Sbjct: 141 -----------DVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAK--------DCR 200

Query: 184 CGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQV----SAPKAYGN 243
            G+G  R        + G   Y C       G   + +D        V    S     G 
Sbjct: 201 GGSGGNRYGGGGGRGSGGDGCYMCG------GVGHFARDCRQNGGGNVGGGGSTCYTCGG 260

Query: 244 TNDTSKSVTTNVKTGSSS---SFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSLGSC 303
               +K  T+ + +G      + Y+ GG GH A+D  +  S S+     GG   S+   C
Sbjct: 261 VGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSS-----GGGGGSN--KC 299

Query: 304 FKCGKAGHWAKDCSN 311
           F CGK GH+A++C++
Sbjct: 321 FICGKEGHFARECTS 299

BLAST of PI0018025 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 2.1e-04
Identity = 27/62 (43.55%), Postives = 34/62 (54.84%), Query Frame = 0

Query: 54  GSKANSDNNVSISANTTAQSEGGG-------SCFKCGKLGHWARDCDAPGGG-----GSF 104
           GS+   D+  SI+   +    GGG        CFKCG++GHWARDC + GGG     G F
Sbjct: 96  GSRGGRDSGYSIAGKGSFGGGGGGGGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGF 155

BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A0A0KVB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G062410 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.6e-131
Identity = 237/321 (73.83%), Postives = 259/321 (80.69%), Query Frame = 0

Query: 3   NSTQWRTAAEVISLVNKVRNIPKPTIDLP---------KMPLRR----FRITPLKGNPVL 62
           +S QWRTAAEV+SLV KVRN+P PTIDLP         K+PL        I P KG+  L
Sbjct: 4   SSLQWRTAAEVVSLVKKVRNVPNPTIDLPKNAVAEVSHKVPLNADFLGTYIAPYKGSRAL 63

Query: 63  PQVSGSKANSDNNVSISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTP 122
            Q+SGS+A+SD NVSI  NTTAQSEG GSCFKCGKLGHWARDCDAPGGGGSFSSSGND  
Sbjct: 64  SQISGSEASSDKNVSIYENTTAQSEGDGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDMS 123

Query: 123 VAEKACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQ 182
           V +KACPCG GICSVLTA T+RNRGRKFY CPVRQENGGCGFFEWCDSA V N+++YGSQ
Sbjct: 124 VPDKACPCGSGICSVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDSASVANVVSYGSQ 183

Query: 183 NPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQ 242
           NP SSSF DLQCPCGAGSC+ILTAKT  NVGKQFY CPS QA C FF+WC++P MET+NQ
Sbjct: 184 NPLSSSFSDLQCPCGAGSCKILTAKTGNNVGKQFYCCPSSQASCRFFRWCEEPSMETKNQ 243

Query: 243 VSAPKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQS 302
            S PK YGNTNDTSKS T NVKT SSSS YK+G EGH A+D+SQS SSS  PAEYG SQS
Sbjct: 244 ESTPKVYGNTNDTSKSATLNVKTSSSSSSYKYGSEGHWARDWSQSPSSSTSPAEYGRSQS 303

Query: 303 SSLGSCFKCGKAGHWAKDCSN 311
           SS GSCFKCG  GHWA+DCSN
Sbjct: 304 SSAGSCFKCGMPGHWARDCSN 324

BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A6J1JBZ0 (cold shock domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483073 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.2e-111
Identity = 215/319 (67.40%), Postives = 241/319 (75.55%), Query Frame = 0

Query: 10  AAEVISLVNKVRNIPKPTIDLPKMPLRR-------------FRITPLKGNP-VLPQVSGS 69
           AAE  +L +K R IP  TI+ PK  +                 I  LKG+P +L Q+SG 
Sbjct: 28  AAEARALASKRRKIPNHTINPPKRAIAEVTNKVSPNVDAEGIYIAALKGDPIILSQLSGR 87

Query: 70  KANSDNNVSISANTT--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEK 129
            ANS N   ISANTT  AQS+GGGSCFKCGKLGHWARDCDAPG GGSFS+S NDT VAEK
Sbjct: 88  IANSGNKGFISANTTAHAQSDGGGSCFKCGKLGHWARDCDAPGSGGSFSASENDTSVAEK 147

Query: 130 ACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQN-PS 189
           +CPCG G+C VLTA T+RNRGRKFY CPVRQENGGCGFFEWCD+A  TN+MTYGSQN  S
Sbjct: 148 SCPCGRGVCVVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRAS 207

Query: 190 SSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSA 249
           SSSF DL+CPCGAGSC  LTAKT ENVG+QFYRCPS+QA CGFFQWCK+P M  +NQVSA
Sbjct: 208 SSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMAAKNQVSA 267

Query: 250 PKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSN-PPAEYGGSQSSS 309
            K YGNT DTSK +    + GSS   YK GGEGH A+D SQSL+ SN PPAE+G +QSSS
Sbjct: 268 SKVYGNTTDTSKGMPATARAGSSC--YKCGGEGHWARDCSQSLAPSNPPPAEFGRNQSSS 327

Query: 310 LGSCFKCGKAGHWAKDCSN 311
            GSCFKCGK GHWA+DCSN
Sbjct: 328 AGSCFKCGKPGHWARDCSN 344

BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A6J1EZ11 (cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437513 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 3.5e-108
Identity = 211/318 (66.35%), Postives = 233/318 (73.27%), Query Frame = 0

Query: 10  AAEVISLVNKVRNIPKPTIDLPKMPLRR-------------FRITPLKGNP-VLPQVSGS 69
           AAE  +L +K R IP  TID PK  +                 I  LKG+P +L Q+SG 
Sbjct: 28  AAEARALASKRRKIPNHTIDPPKRAIAEVTSKVSPNADAEGIYIAALKGDPIILSQLSGR 87

Query: 70  KANSDNNVSISANTT--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEK 129
            ANS N   ISANTT  AQSEGGGSCFKCGKLGHWARDCDAPG GGSFS SGNDT VAEK
Sbjct: 88  IANSGNKGFISANTTAHAQSEGGGSCFKCGKLGHWARDCDAPGSGGSFSFSGNDTSVAEK 147

Query: 130 ACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQN-PS 189
           +CPCG+G+C VLTA T+RNRGRKFY CPVRQENGGCGFFEWCD+A  TN+MTYGSQN  S
Sbjct: 148 SCPCGMGVCVVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRAS 207

Query: 190 SSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSA 249
           SSSF DL+CPCGAGSC  LTAKT ENVG+QFYRCPS+QA CGFFQWCK+  M  +NQVS 
Sbjct: 208 SSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEASMAAKNQVSG 267

Query: 250 PKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSL 309
            K YGNT DTSK +    + GSS   YK GGEGH A+D SQSL+ SN        QSSS 
Sbjct: 268 SKVYGNTTDTSKGMPATARAGSSC--YKCGGEGHWARDCSQSLAPSN--------QSSSA 327

Query: 310 GSCFKCGKAGHWAKDCSN 311
           GSCFKCGK GHWA+DCSN
Sbjct: 328 GSCFKCGKPGHWARDCSN 335

BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A6J1C4N6 (DNA-binding protein HEXBP-like OS=Momordica charantia OX=3673 GN=LOC111008238 PE=4 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106
Identity = 209/326 (64.11%), Postives = 233/326 (71.47%), Query Frame = 0

Query: 10  AAEVISLVNKVRNIPKPTIDLPKMPLRR----FRITPLKGNPVLP-QVSGSKANS----- 69
           AAE  +L +K R IP  TID PKM +        +  L+G P LP Q+SG  ANS     
Sbjct: 27  AAEARALASKRRRIPNHTIDPPKMAIAEEPEGLYMAALRGKPNLPSQISGGTANSRAKGV 86

Query: 70  --DNNVSISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEKACPC 129
              N   +SAN TAQSEGGGSCFKCGKLGHWARDCDAPGGGGSF ++G D  VAEKACPC
Sbjct: 87  AAANRGFVSANPTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFGTAGTDASVAEKACPC 146

Query: 130 GLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQNPSSSS-F 189
           GLG+C VLTA T+RNRGRKFY CPVRQENGGCGFFEWCDSA  TN+MTYGSQN +SSS F
Sbjct: 147 GLGVCIVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDSASGTNVMTYGSQNRASSSLF 206

Query: 190 PDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSAPKAY 249
            DL CPCGAGSC ILTAKT ENVG+QFYRCPS+Q  CGFFQWCK+P M T+NQV+  K Y
Sbjct: 207 SDLMCPCGAGSCIILTAKTGENVGQQFYRCPSYQESCGFFQWCKEPPMATKNQVNDYKIY 266

Query: 250 GNTNDTSKSVTTNVKTGSS------------SSFYKHGGEGHSAKDYSQSLSSSNPPAEY 309
           GN NDTSKS     +T SS            SS YK GGEGH A+D SQS +SSNPP   
Sbjct: 267 GNANDTSKSFAPTPRTSSSIDASRSFAVRTGSSCYKCGGEGHWARDCSQSHTSSNPPFAE 326

Query: 310 GGSQSSSLGSCFKCGKAGHWAKDCSN 311
            G   S+ G+CFKC K GHWA+DC N
Sbjct: 327 LGRNPSASGTCFKCSKPGHWARDCPN 352

BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A1S4DYV0 (DNA-binding protein HEXBP-like OS=Cucumis melo OX=3656 GN=LOC103493251 PE=4 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 5.1e-99
Identity = 183/235 (77.87%), Postives = 194/235 (82.55%), Query Frame = 0

Query: 77  GSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEKACPCGLGICSVLTAKTDRNRGRK 136
           G+CFKCGKLGHWARDCDAPGGGGSF+SSGND  VAEKA PCG G+C VLTA T+RNRGRK
Sbjct: 103 GACFKCGKLGHWARDCDAPGGGGSFNSSGNDVSVAEKARPCGSGVCLVLTANTERNRGRK 162

Query: 137 FYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQNPSSSSFPDLQCPCGAGSCRILTAKTV 196
           FY C VRQENGGCGFFEWCDSAP         QNP SSSFPDLQCPCGAGSCRILTAK+ 
Sbjct: 163 FYRCLVRQENGGCGFFEWCDSAP--------GQNPLSSSFPDLQCPCGAGSCRILTAKSR 222

Query: 197 ENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSAPKAYGNTNDTSKSVTTNVKTGSSS 256
            NVGKQFY CPS Q  C FFQWC++P +ET+NQVSAPK Y   ND SKSVT NVKT SSS
Sbjct: 223 NNVGKQFYCCPSSQDSCRFFQWCEEPSIETKNQVSAPKVY--ANDMSKSVTGNVKTSSSS 282

Query: 257 SFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSLGSCFKCGKAGHWAKDCSNS 312
           S YK GGEGH A+D SQSLS SNPPA YG SQSSSLGSCFKCG+ GHWAKDCSNS
Sbjct: 283 SCYKCGGEGHWARDCSQSLSPSNPPAAYGRSQSSSLGSCFKCGQPGHWAKDCSNS 327

BLAST of PI0018025 vs. NCBI nr
Match: XP_004147743.1 (DNA topoisomerase 3-alpha [Cucumis sativus])

HSP 1 Score: 476.9 bits (1226), Expect = 1.4e-130
Identity = 237/321 (73.83%), Postives = 259/321 (80.69%), Query Frame = 0

Query: 3   NSTQWRTAAEVISLVNKVRNIPKPTIDLP---------KMPLRR----FRITPLKGNPVL 62
           +S QWRTAAEV+SLV KVRN+P PTIDLP         K+PL        I P KG+  L
Sbjct: 4   SSLQWRTAAEVVSLVKKVRNVPNPTIDLPKNAVAEVSHKVPLNADFLGTYIAPYKGSRAL 63

Query: 63  PQVSGSKANSDNNVSISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTP 122
            Q+SGS+A+SD NVSI  NTTAQSEG GSCFKCGKLGHWARDCDAPGGGGSFSSSGND  
Sbjct: 64  SQISGSEASSDKNVSIYENTTAQSEGDGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDMS 123

Query: 123 VAEKACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQ 182
           V +KACPCG GICSVLTA T+RNRGRKFY CPVRQENGGCGFFEWCDSA V N+++YGSQ
Sbjct: 124 VPDKACPCGSGICSVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDSASVANVVSYGSQ 183

Query: 183 NPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQ 242
           NP SSSF DLQCPCGAGSC+ILTAKT  NVGKQFY CPS QA C FF+WC++P MET+NQ
Sbjct: 184 NPLSSSFSDLQCPCGAGSCKILTAKTGNNVGKQFYCCPSSQASCRFFRWCEEPSMETKNQ 243

Query: 243 VSAPKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQS 302
            S PK YGNTNDTSKS T NVKT SSSS YK+G EGH A+D+SQS SSS  PAEYG SQS
Sbjct: 244 ESTPKVYGNTNDTSKSATLNVKTSSSSSSYKYGSEGHWARDWSQSPSSSTSPAEYGRSQS 303

Query: 303 SSLGSCFKCGKAGHWAKDCSN 311
           SS GSCFKCG  GHWA+DCSN
Sbjct: 304 SSAGSCFKCGMPGHWARDCSN 324

BLAST of PI0018025 vs. NCBI nr
Match: XP_038903890.1 (cold shock domain-containing protein 3-like [Benincasa hispida])

HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-120
Identity = 227/316 (71.84%), Postives = 251/316 (79.43%), Query Frame = 0

Query: 10  AAEVISLVNKVRNIPKPTIDLP---------KMPLRR----FRITPLKGNPV-LPQVSGS 69
           AAE ++L +K R IP   ID P         K+PL        I  LKGNP+ L Q+SG 
Sbjct: 27  AAEAVALASKRRKIPNHIIDPPKNAVAEVSDKIPLNAEAEGIYIAALKGNPILLSQISGW 86

Query: 70  KANSDNNVSISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEKAC 129
           K NS N  SISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFS+SGND  VAEKAC
Sbjct: 87  KVNSGNKGSISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSASGNDASVAEKAC 146

Query: 130 PCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQN-PSSS 189
           PCGLG+CS+LTA T+RNRGRKFY CPVRQENGGCGFFEWCDS PV  +M YGSQN  SSS
Sbjct: 147 PCGLGVCSILTANTERNRGRKFYKCPVRQENGGCGFFEWCDSVPV--MMNYGSQNRASSS 206

Query: 190 SFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSAPK 249
           SF D+QCPCGAGSC ILTAKT ENVG+QFYRCPS+QA CGFFQWCK+P M T+NQVSA K
Sbjct: 207 SFSDIQCPCGAGSCIILTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMATKNQVSASK 266

Query: 250 AYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSLGS 309
            Y NT+D SKSV   V+TGSSSS YK GGEGH A+D SQSL+S NPP E+G SQSSSLG+
Sbjct: 267 VYSNTSDASKSVAVTVRTGSSSSCYKCGGEGHWARDCSQSLASPNPP-EFGRSQSSSLGT 326

Query: 310 CFKCGKAGHWAKDCSN 311
           CFKCGK GHWA+DC+N
Sbjct: 327 CFKCGKPGHWARDCAN 339

BLAST of PI0018025 vs. NCBI nr
Match: XP_022984959.1 (cold shock domain-containing protein 3-like [Cucurbita maxima])

HSP 1 Score: 412.9 bits (1060), Expect = 2.4e-111
Identity = 215/319 (67.40%), Postives = 241/319 (75.55%), Query Frame = 0

Query: 10  AAEVISLVNKVRNIPKPTIDLPKMPLRR-------------FRITPLKGNP-VLPQVSGS 69
           AAE  +L +K R IP  TI+ PK  +                 I  LKG+P +L Q+SG 
Sbjct: 28  AAEARALASKRRKIPNHTINPPKRAIAEVTNKVSPNVDAEGIYIAALKGDPIILSQLSGR 87

Query: 70  KANSDNNVSISANTT--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEK 129
            ANS N   ISANTT  AQS+GGGSCFKCGKLGHWARDCDAPG GGSFS+S NDT VAEK
Sbjct: 88  IANSGNKGFISANTTAHAQSDGGGSCFKCGKLGHWARDCDAPGSGGSFSASENDTSVAEK 147

Query: 130 ACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQN-PS 189
           +CPCG G+C VLTA T+RNRGRKFY CPVRQENGGCGFFEWCD+A  TN+MTYGSQN  S
Sbjct: 148 SCPCGRGVCVVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRAS 207

Query: 190 SSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSA 249
           SSSF DL+CPCGAGSC  LTAKT ENVG+QFYRCPS+QA CGFFQWCK+P M  +NQVSA
Sbjct: 208 SSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEPSMAAKNQVSA 267

Query: 250 PKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSN-PPAEYGGSQSSS 309
            K YGNT DTSK +    + GSS   YK GGEGH A+D SQSL+ SN PPAE+G +QSSS
Sbjct: 268 SKVYGNTTDTSKGMPATARAGSSC--YKCGGEGHWARDCSQSLAPSNPPPAEFGRNQSSS 327

Query: 310 LGSCFKCGKAGHWAKDCSN 311
            GSCFKCGK GHWA+DCSN
Sbjct: 328 AGSCFKCGKPGHWARDCSN 344

BLAST of PI0018025 vs. NCBI nr
Match: XP_023552737.1 (cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412.1 bits (1058), Expect = 4.1e-111
Identity = 214/319 (67.08%), Postives = 240/319 (75.24%), Query Frame = 0

Query: 10  AAEVISLVNKVRNIPKPTIDLPKMPLRR-------------FRITPLKGNP-VLPQVSGS 69
           AAE  +L +K R IP  TID PK  +                 I  LKG+P +L Q+SG 
Sbjct: 27  AAEARALASKRRKIPNHTIDPPKRAVAEVTSKVSPNADAEGIYIAALKGDPIILSQLSGR 86

Query: 70  KANSDNNVSISANTT--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEK 129
            ANS N   ISANTT  AQSEGGGSCFKCGKLGHWARDCDAPG GGSFS+SGNDT VAEK
Sbjct: 87  IANSGNKGFISANTTAHAQSEGGGSCFKCGKLGHWARDCDAPGSGGSFSASGNDTSVAEK 146

Query: 130 ACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQN-PS 189
           +CPCG+G+C VLTA T+RNRGRKFY C VRQENGGCGFFEWCD+A  TN+MTYGSQN  S
Sbjct: 147 SCPCGMGVCVVLTANTERNRGRKFYKCAVRQENGGCGFFEWCDNASSTNIMTYGSQNRAS 206

Query: 190 SSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSA 249
           SSSF DL+CPCGAGSC  LTAKT +NVG+QFYRCPS+QA CGFFQWCK+P M  +NQ S 
Sbjct: 207 SSSFSDLKCPCGAGSCITLTAKTGDNVGQQFYRCPSYQATCGFFQWCKEPSMAAKNQASG 266

Query: 250 PKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSN-PPAEYGGSQSSS 309
            K YGNT DTSK +    + GSS   YK GGEGH A+D SQSL+ SN PPAE+G +QSSS
Sbjct: 267 SKVYGNTTDTSKGMPATARAGSSC--YKCGGEGHWARDCSQSLAPSNPPPAEFGRNQSSS 326

Query: 310 LGSCFKCGKAGHWAKDCSN 311
            GSCFKCGK GHWA+DCSN
Sbjct: 327 AGSCFKCGKPGHWARDCSN 343

BLAST of PI0018025 vs. NCBI nr
Match: XP_022931285.1 (cold shock domain-containing protein 3-like [Cucurbita moschata])

HSP 1 Score: 401.4 bits (1030), Expect = 7.3e-108
Identity = 211/318 (66.35%), Postives = 233/318 (73.27%), Query Frame = 0

Query: 10  AAEVISLVNKVRNIPKPTIDLPKMPLRR-------------FRITPLKGNP-VLPQVSGS 69
           AAE  +L +K R IP  TID PK  +                 I  LKG+P +L Q+SG 
Sbjct: 28  AAEARALASKRRKIPNHTIDPPKRAIAEVTSKVSPNADAEGIYIAALKGDPIILSQLSGR 87

Query: 70  KANSDNNVSISANTT--AQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEK 129
            ANS N   ISANTT  AQSEGGGSCFKCGKLGHWARDCDAPG GGSFS SGNDT VAEK
Sbjct: 88  IANSGNKGFISANTTAHAQSEGGGSCFKCGKLGHWARDCDAPGSGGSFSFSGNDTSVAEK 147

Query: 130 ACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQN-PS 189
           +CPCG+G+C VLTA T+RNRGRKFY CPVRQENGGCGFFEWCD+A  TN+MTYGSQN  S
Sbjct: 148 SCPCGMGVCVVLTANTERNRGRKFYKCPVRQENGGCGFFEWCDNASATNIMTYGSQNRAS 207

Query: 190 SSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSA 249
           SSSF DL+CPCGAGSC  LTAKT ENVG+QFYRCPS+QA CGFFQWCK+  M  +NQVS 
Sbjct: 208 SSSFSDLKCPCGAGSCITLTAKTGENVGQQFYRCPSYQATCGFFQWCKEASMAAKNQVSG 267

Query: 250 PKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSL 309
            K YGNT DTSK +    + GSS   YK GGEGH A+D SQSL+ SN        QSSS 
Sbjct: 268 SKVYGNTTDTSKGMPATARAGSSC--YKCGGEGHWARDCSQSLAPSN--------QSSSA 327

Query: 310 GSCFKCGKAGHWAKDCSN 311
           GSCFKCGK GHWA+DCSN
Sbjct: 328 GSCFKCGKPGHWARDCSN 335

BLAST of PI0018025 vs. TAIR 10
Match: AT3G42860.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 205.7 bits (522), Expect = 5.5e-53
Identity = 121/286 (42.31%), Postives = 163/286 (56.99%), Query Frame = 0

Query: 36  RRFRITPLKGNPVLPQVSGSKAN----SDNNVSISANTTAQSEGGGSCFKCGKLGHWARD 95
           +R R++ +   P +  + GSK++    S  N +  + + A + GG               
Sbjct: 31  KRPRVSSIPEGPYMAALKGSKSDQWQQSPLNPASKSRSVAVTTGGFQ------------- 90

Query: 96  CDAPGGGGSFSSSGNDTPVAEKACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGF 155
             + GGGG   +   D P  EK+CPCG+GIC +LT+ T +N GRKFY CP R+ENGGCGF
Sbjct: 91  -RSDGGGG--VAGEQDFP--EKSCPCGVGICLILTSNTPKNPGRKFYKCPNREENGGCGF 150

Query: 156 FEWCDSAPVTNLMTYGSQ---NPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPS 215
           F+WCD+   +   T  S    N + + FPD QCPCGAG CR+LTAKT ENVG+QFYRCP 
Sbjct: 151 FQWCDAVQSSGTSTTTSNSYGNGNDTKFPDHQCPCGAGLCRVLTAKTGENVGRQFYRCPV 210

Query: 216 FQAPCGFFQWCKDPFMETENQVSAPKAY-----GNTNDTSKSVTTNVKTGSSSSFYKHGG 275
           F+  CGFF+WC D      N VS+P +Y      N  D+      N KTG+    YK G 
Sbjct: 211 FEGSCGFFKWCND------NVVSSPTSYSVTKNSNFGDSDTRGYQNAKTGTPC--YKCGK 270

Query: 276 EGHSAKDYSQSLSSSNPPAEYGGSQSSSLGSCFKCGKAGHWAKDCS 310
           EGH A+D   ++ S   P +     +S+ G CFKCGK GHW++DC+
Sbjct: 271 EGHWARDC--TVQSDTGPVK----STSAAGDCFKCGKPGHWSRDCT 284

BLAST of PI0018025 vs. TAIR 10
Match: AT5G13920.1 (GRF zinc finger / Zinc knuckle protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-09
Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 0

Query: 154 WCDSAPVTNLMTYGSQNPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPC 213
           W +  P   L +Y    P     P +QCPCG G C I  A T EN G++FY+CP+ Q  C
Sbjct: 20  WINDCP---LKSYTDDPP-----PAIQCPCGGGFCEIKVANTRENPGRKFYKCPTAQ-NC 76

Query: 214 GFFQWC 220
            FF+WC
Sbjct: 80  CFFKWC 76

BLAST of PI0018025 vs. TAIR 10
Match: AT1G54930.1 (GRF zinc finger / Zinc knuckle protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.8e-09
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0

Query: 154 WCDSAPVTNLMTYGSQNPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPC 213
           W  + P+    T      ++ S PD+ CPC AG C  +T+KT +N  ++FY CPS    C
Sbjct: 15  WAKNCPLKT--TTKPTAAAAPSPPDIHCPCNAGPCNTVTSKTEKNPNRRFYTCPS----C 74

Query: 214 GFFQWC 220
           G+F+WC
Sbjct: 75  GYFKWC 74

BLAST of PI0018025 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 )

HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06
Identity = 65/255 (25.49%), Postives = 93/255 (36.47%), Query Frame = 0

Query: 64  SISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEKAC-PCGLGIC 123
           S++    +    GG+CF CG++GH A+DCD   GG SF   G      E  C  CG    
Sbjct: 81  SLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGEGECYMCG---- 140

Query: 124 SVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQNPSSSSFPDLQCP 183
                          +A   RQ  GG          P  +    G             C 
Sbjct: 141 -----------DVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAK--------DCR 200

Query: 184 CGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQV----SAPKAYGN 243
            G+G  R        + G   Y C       G   + +D        V    S     G 
Sbjct: 201 GGSGGNRYGGGGGRGSGGDGCYMCG------GVGHFARDCRQNGGGNVGGGGSTCYTCGG 260

Query: 244 TNDTSKSVTTNVKTGSSS---SFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSLGSC 303
               +K  T+ + +G      + Y+ GG GH A+D  +  S S+     GG   S+   C
Sbjct: 261 VGHIAKVCTSKIPSGGGGGGRACYECGGTGHLARDCDRRGSGSS-----GGGGGSN--KC 299

Query: 304 FKCGKAGHWAKDCSN 311
           F CGK GH+A++C++
Sbjct: 321 FICGKEGHFARECTS 299

BLAST of PI0018025 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain )

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-05
Identity = 27/62 (43.55%), Postives = 34/62 (54.84%), Query Frame = 0

Query: 54  GSKANSDNNVSISANTTAQSEGGG-------SCFKCGKLGHWARDCDAPGGG-----GSF 104
           GS+   D+  SI+   +    GGG        CFKCG++GHWARDC + GGG     G F
Sbjct: 96  GSRGGRDSGYSIAGKGSFGGGGGGGGRVGEDECFKCGRVGHWARDCPSAGGGRGGPVGGF 155

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q3MHN72.2e-0627.78Endonuclease 8-like 3 OS=Bos taurus OX=9913 GN=NEIL3 PE=2 SV=2[more]
Q94C694.1e-0525.49Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 P... [more]
Q8RWN52.1e-0443.55Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE... [more]
Match NameE-valueIdentityDescription
A0A0A0KVB66.6e-13173.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G062410 PE=4 SV=1[more]
A0A6J1JBZ01.2e-11167.40cold shock domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1EZ113.5e-10866.35cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC... [more]
A0A6J1C4N61.1e-10664.11DNA-binding protein HEXBP-like OS=Momordica charantia OX=3673 GN=LOC111008238 PE... [more]
A0A1S4DYV05.1e-9977.87DNA-binding protein HEXBP-like OS=Cucumis melo OX=3656 GN=LOC103493251 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_004147743.11.4e-13073.83DNA topoisomerase 3-alpha [Cucumis sativus][more]
XP_038903890.11.7e-12071.84cold shock domain-containing protein 3-like [Benincasa hispida][more]
XP_022984959.12.4e-11167.40cold shock domain-containing protein 3-like [Cucurbita maxima][more]
XP_023552737.14.1e-11167.08cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo][more]
XP_022931285.17.3e-10866.35cold shock domain-containing protein 3-like [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT3G42860.15.5e-5342.31zinc knuckle (CCHC-type) family protein [more]
AT5G13920.11.7e-0943.94GRF zinc finger / Zinc knuckle protein [more]
AT1G54930.12.8e-0939.39GRF zinc finger / Zinc knuckle protein [more]
AT2G17870.12.9e-0625.49cold shock domain protein 3 [more]
AT5G04280.11.5e-0543.55RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 294..310
e-value: 5.0E-5
score: 32.7
coord: 78..94
e-value: 5.7E-5
score: 32.5
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 78..93
e-value: 1.8E-7
score: 30.9
coord: 294..309
e-value: 1.3E-6
score: 28.2
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 79..92
score: 10.608721
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 295..310
score: 10.724101
NoneNo IPR availableGENE3D4.10.60.10coord: 71..109
e-value: 2.8E-7
score: 32.0
NoneNo IPR availableGENE3D4.10.60.10coord: 247..311
e-value: 8.2E-9
score: 37.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 269..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 259..291
NoneNo IPR availablePANTHERPTHR33680:SF4ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 55..251
NoneNo IPR availablePANTHERPTHR33680OS07G0190500 PROTEINcoord: 55..251
coord: 272..308
NoneNo IPR availablePANTHERPTHR33680:SF4ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEINcoord: 272..308
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 114..157
e-value: 4.5E-16
score: 58.7
coord: 180..221
e-value: 6.5E-14
score: 51.8
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 71..97
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 274..310

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0018025.1PI0018025.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003677 DNA binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003676 nucleic acid binding