PI0018025 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACTCTACGCAGTGGCGGACCGCAGCTGAAGTTATATCCCTAGTCAATAAAGTCAGAAATATCCCTAAGCCTACCATCGATCTGCCAAAAATGCCGTTGCGGAGGTTTCGCATAAAGTTCCCCGTAATGCAGACTCTGTAGGGATCACCCCTTTGAAAGGAAACCCTGTTCTCCCTCAAGTTTCGGGTTCGAAAGCCAATTCTGACAACAATGTATCCATTTCTGCAAATACTACTGCTCAATCGGAAGGCGGTGGTTCCTGTTTCAAATGCGGGAAATTAGGGCATTGGGCTAGAGACTGCGATGCTCCGGGTGGTGGAGGATCTTTCAGTTCTTCAGGAAATGATACGCCAGTTGCGGAGAAAGCATGCCCCTGCGGATTGGGAATTTGTTCAGTACTAACTGCGAAAACGGATAGGAATCGCGGTCGAAAATTTTACGCATGCCCCGTTCGGCAGGTGTTGAGGGAAACTGTCTTCATCTTTTTCTTTTTTGTTTGATAGTATCATTTCTTCTTCTTTCCTAATTATCGCCACTTTTTAAGTCATAATGTTGCCGCGTAAACTTGGAAATGGAAGAGCGATTTCGAGTTCTGATGAAGTCATGTCTTTTTTCATCTGGCTGATGTTGGGTTTTGTGAAAAATATATAAACATCTATTAAGAACCTCGAGAAAGATATTGATGTTACTTAAACCTTTGTTATAATCACCTAGAAATTAAATTAGTAATGTGTAATGTAATGCTGCGATGGATCATATAATTTTTGTTGATTAAAACATACTTGTTCTTTAACCAACTGGGTCTAATAGATTCGAGTACTAGTACCCTGTCAAAAAATTTGTGGAAGTACCTTATTAAACTCTAAAGTTTGTTATTATCATTTTGAATTCAAAGCTCATTAAATTATTTCTGTGCGCAATAACTTTTATCATCACATGGTAATATACCATGACTTTACTTTCTTCTCATGTACATTCAATTGTTCTCAGGAAAATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAGTGCCCCTGTAACTAATCTAATGACTTATGGAAGCCAAAATCCATCAAGTTCGTCATTTCCAGACCTTCAGTGCCCCTGTGGTGCTGGTTCTTGCAGAATTCTAACAGCTAAAACAGTGGAAAACGTTGGGAAGCAGTTCTATCGTTGCCCTTCATTCCAGGTAATTTTTATAACACAAATGTTTGTGCAGCAGCTTTTATTGTCTTGTGATGACGTGATTCTCAAAACTGTTTGTTCACGATTAAGGGTCATAGCTTCTCTTACCTTATTACAAAGTGGAAACATCTTTTGTATTCCCTTCAGTTGAGACTCTTTTGTATACCATTGGATGTTTCATCAATCTATGCAATAGTTTCTTATCTAAAGAAACAAATTTCGGTTGCTGAATTTTCATTTTCATATCAAGAAGTCATGGACCATCCAATTATCTGACTGACAACTGTGGGAAAGCTTCTGAAGTGTGTATGCATTTGACTCTTCATTCTGACTGGTTGGAAGAAAATAAAATTTGCTCTGATACCGTGGCTAAGTGCTTCTCATTTATTCTTCTCATTCTTCCGAATTTAATTTAGAGTACCAATTTTATGACTTTACATCTTTAGATCAATTGATGGTGCTGGAAGTTGCAAAGTATGGCCTTGAAGGTGGGCGAAATTATTGCAAACAATTAGATAGTCGCCAATTACTCTGCATAATTATTAAATGAGTGAAGCTTATAAAGAGGGATGTTATAGTTGCATTATGAACGGAAAGAAAGCAGGGAAAAGAACCAATGCATGTGCGTGCAGTATATAATAAGAATTTTCTTAGTGAAGTTTCGGAGAGGACCTTTATCAAGGAAAACACAGCTCTAGATCTTTTAAGCCAAGGTATCTGAACAAAGTTTCTGAGACGACTTTTATCTAGGAAAACACTAATGAGTCCGTGTTACGCAATTTAGAGCACAATCAAGAGCAAATTAATTTAATTCCAACTCTACGTAAAATTAGTTGAAGAATGTAAGGTCTTTGATCTGAATACCTACCAGAAAATTAGTCAATGGGACTGGGAGATGATGTACAATTGTTGGGCATGAGTGTGTATGTAGGTCTTTAAGGGTCAGATTCTGTTTCGGGCAGGGGTATGGTATTTTTGTAGTTGAATACTGTTCTAAGGTTTAGGATAGTTTCTTTAATTGGATGGGTTTGCATTTTTGTTTGTTTTTCAACGTTGCTATTGTTTCCTCAACTTACATTTCAATGAAATAGTGAGGGAGAGAATTAGTGGATTGTCGTTCTGTAGTTTTTCTCCCTGCCTTTTAGATGGTTGGGATACTTCACTAATTACTCCTCGATATGAGAAATTTCATGTTCAATTATGCATAGCACTATGTTATGAACTAAGAAGCACCAACACTCCTAACATGGCCGAGTATCGGTGTTGGACACGTTTCCGACACCGACACGCCAATTGGCGTGTCAAATTTTTTTAAAAAAATTTTTTGGACACGGCCCAGACACAGGAAGCCCAGAAATGGCCCAATTGCATAATTATTTAGGTTTTTTTTTTAAATTTCCTTTTCTTCTTCACGATCTCACGGTCTCTTTTCACAATCTCACTATCCCTCTCGACTCTCTCTGTCTTCTCCGATTCTCCCAAGTCCCACCATCCGTCGCATTGAAGCTCTCGCCAGTTGCCGTCGTTTTCCGTCTCTCTCCTAGTCGCTGTCGCCACCATCTCTGCCCATTTCTGTCGAGTTTTCCAAGACCCAAAGTTTGTGTCTGCCTCCCTTCTTTTATTTTTTATTTTTTCTTTTCTTGCTTTGTGGTTGGACCAACTTATTGATTTAGTTTGGCTGGAAGTGACAGTGGACATTGTTGAATGTTGGGTTTACTGTTTATGTTTATCATATGATTTTTTTTCCATTAAATCTTATTTGGTTATTTTTCTGTTTTTATTTTAAATTTAGTAGGGTAGAATCATCTTTAAGTCATACCGAAATTAATTCAAGAATGACTATCGAGGATGATACAAAACTGTTATGGCAGTATGTGACAAAACATGAAAGGTTGAGTGGTGGAGGAGGGGATTTTGCTTGGCAATGTAATTTTTGTCAAGAAAGGAGGAAAATGTCTTACATAAGAGTTAGGGCACATCTACTAAAAATGGTTGGATTTGGGATTGGGGTATGTAGGAAGGTCACTCCTAAAGATCTTGTTGACATGCAAATGTTGGAAGAGGAATCTAAAGTTCGTGTTGCAAACAATGCTCCTAAGCAAGTTCCATTACCACCTTCACGATATATGCAAGTTGAATCTCAATCTTTTGGATCGGGAAGCATGGGCAGCTATTCATATTCCTTTTCACCAATGGAACAAAAGAAAAGGAAAGGAAATGTTAGTGGTCTTGAGAAGTCCTTTAACTTGGCACTTCGTGATTAAGTAGATTCAGAGATAACTAGAATGTTTTATTCTTCAGGCCTTTCTATTTGGCTAGAAATCCACATTATGTAAATGTCTTTGCTTTGGTTGCAAATAATTCTTTGTCAGGTTATTTACCTTTGGGGTATCATAAATTAAGAACAAGTCTTCTTCAAAGAGAAAGAACAAATGTCGAGAGATTGTTGCAACCTATTAAAACTACATAGTTTGCAAAAGGAGTAAGTATTATCTTCGATGGATGGAGTGATTCACAAAGGAGACGATTGATTAACTTTATGGTAGTTACAGAAAGGGGACCAATGTTTCTTAAAGCTGTAGATTGCTCAGGTGAGATAAAGGATAAATATTTCATAGCAAATCTGATGAAAGAAGTCATAAATGAGTTGAGACACGAGAATGTGAATCAAATAATCACTGACAATGCTGCAAATTGTCAAGGTGCAGGGCAAATTATTGAATCACAGTTTCCTAACATAGTTTGGACATCATGTGTAGTTCATACCCTTAATCTTGCCTTGAAGAACATATGTGCTGCAAGAAACATTGATAGTAATCAACATGTATTTGCATAGTGCAGTTGGATTTCTGGAATTTCTGATAGTGTTATGTTTATCAAATACTTTATCATGAATCATTCGATGAGACTAGCTATGTTCAATGAGTTTATGTCTTTAAAGTTACTTGTAGTAGGAGAAACACGATTCACATCTACCATCATGCTTAAAAGATTTAAACTTATTAAGGGTGGTTTGCAAACAATGGTTAGTGGGGATGCTACAGAGAAGATGATACGGTGAAAGCAAGACATGTAAAGGAGTTGGTGCTTGATGATATTTGGTGGGATAAGATTGATTATATCCTTTCTTTTATTGCTCCTATTTATGATATGATCAAAACTTGTGATACGAAGAGTTTTCATCTTTTTATAACGTGGTGCATCGAATTTTGATTGATCGACGGAATAAAAATAACACCTCTCTCCATTGTTTGGTCCATTCTCTAAATCCAAGGTATTCATCTTAGATCTTTATTTTATTTTTTCAATTTCTAAACACACCCTAAAATTTGGTCCATTTTAAAATAAGTTTTTTTCAAGAATAATAAATAAATACAAACTATTTACACTTTATGGCAAAATCAAGTGTAATGAGTTTCTGTCCTTTAGTGGTTTTTTGCCATTTTTGACAATTCCCCTTTTAAAATTTTATTTAGGTATTATAGTGCACAATGGCTTCAAGAAGACAAGTCTCTAGTCCCACCACATTAAGACTTAGAAGTAGCAAGAGAGAGGATGAAGTGTATTAAGAAATATTTCAGTTTAAGGGATGAGAGAACAAAAGTGAACATTGAATTTGTCAAATTTTCTACAATGTCTGAACAATTTGCTGATCATGAATCCATACGAATTAGATATGACATGCCTCCAAAGAGTTGGTAGACCATCCATGGTGCCTTTACTCCAACTTTACAGTCACTAGCTATGAAGTTACTGATTCAACCTTCATCCTCCTCGTGATGTGAGAGAAATTGGAGTACATATTCATTTGTGCACTCTATGAGAAGAAACAAGATGACACCACAACGTGCAGAAGACTTGGTGTACATCTATAGCAATCTACGTCTTTTATCAAGAAGAATTCTTGAATATCTCAAAGAAGAGACAAAAATGTGAGACATTACTGGGGATTCATTTGAAGATGTGGGAATGCTTGGAGTGGCTAGTTTATCCTTGGATGAACGTGGTGAGGCTCAAGTTTAAGTTTGTTAAGGTTTAATGGTTCTAAATTTGTTAGTCTGATGTTTTTAATTGTAATCCTTGTTAGGTAATATGTTTATATGAATAACATATATTTAATTTTTTATTAAAAAATTGAGTGTCGTGTCCTACATTTTTTAAAAATGGCGTGTCGCCGTGTCACTTGTCAGTATCTATGCTTCTTAGGTTATGAAACCCTTCCAAGTTTATTCTTCTATGTTTACTTTATGTCCACCATGATCTATCTAGTTCCAACATCTCGTCAAATTTATACTTGTGTGGTAATGATAATTTCCGTCACCTCCCACATCTGGATGAGTCTCAACATCATGTCAACACAATTTTCTGAAAATGTTTTGATACTTGCAAATTGCATAAGTTATACAGTGGATTGATTTCCATGTTGTAATTCTTCATCTGTTGAACTCAAATCTATTCTGCAGGCACCTTGCGGGTTTTTCCAGTGGTGCAAAGATCCTTTCATGGAAACCGAGAATCAAGTGAGTGCCCCTAAGGCCTACGGTAACACAAATGACACGAGCAAAAGTGTTACAACGAATGTGAAAACTGGTTCTTCCAGTTCCTTCTATAAACATGGGGGTGAAGGGCATTCGGCTAAAGACTACTCGCAATCACTCTCATCATCAAATCCTCCTGCAGAATATGGCGGAAGTCAATCTTCTTCACTTGGAAGCTGTTTCAAATGTGGTAAGGCTGGCCATTGGGCGAAGGACTGCTCTAATTCTTAA ATGAAGAACTCTACGCAGTGGCGGACCGCAGCTGAAGTTATATCCCTAGTCAATAAAGTCAGAAATATCCCTAAGCCTACCATCGATCTGCCAAAAATGCCGTTGCGGAGGTTTCGGATCACCCCTTTGAAAGGAAACCCTGTTCTCCCTCAAGTTTCGGGTTCGAAAGCCAATTCTGACAACAATGTATCCATTTCTGCAAATACTACTGCTCAATCGGAAGGCGGTGGTTCCTGTTTCAAATGCGGGAAATTAGGGCATTGGGCTAGAGACTGCGATGCTCCGGGTGGTGGAGGATCTTTCAGTTCTTCAGGAAATGATACGCCAGTTGCGGAGAAAGCATGCCCCTGCGGATTGGGAATTTGTTCAGTACTAACTGCGAAAACGGATAGGAATCGCGGTCGAAAATTTTACGCATGCCCCGTTCGGCAGGAAAATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAGTGCCCCTGTAACTAATCTAATGACTTATGGAAGCCAAAATCCATCAAGTTCGTCATTTCCAGACCTTCAGTGCCCCTGTGGTGCTGGTTCTTGCAGAATTCTAACAGCTAAAACAGTGGAAAACGTTGGGAAGCAGTTCTATCGTTGCCCTTCATTCCAGGCACCTTGCGGGTTTTTCCAGTGGTGCAAAGATCCTTTCATGGAAACCGAGAATCAAGTGAGTGCCCCTAAGGCCTACGGTAACACAAATGACACGAGCAAAAGTGTTACAACGAATGTGAAAACTGGTTCTTCCAGTTCCTTCTATAAACATGGGGGTGAAGGGCATTCGGCTAAAGACTACTCGCAATCACTCTCATCATCAAATCCTCCTGCAGAATATGGCGGAAGTCAATCTTCTTCACTTGGAAGCTGTTTCAAATGTGGTAAGGCTGGCCATTGGGCGAAGGACTGCTCTAATTCTTAA ATGAAGAACTCTACGCAGTGGCGGACCGCAGCTGAAGTTATATCCCTAGTCAATAAAGTCAGAAATATCCCTAAGCCTACCATCGATCTGCCAAAAATGCCGTTGCGGAGGTTTCGGATCACCCCTTTGAAAGGAAACCCTGTTCTCCCTCAAGTTTCGGGTTCGAAAGCCAATTCTGACAACAATGTATCCATTTCTGCAAATACTACTGCTCAATCGGAAGGCGGTGGTTCCTGTTTCAAATGCGGGAAATTAGGGCATTGGGCTAGAGACTGCGATGCTCCGGGTGGTGGAGGATCTTTCAGTTCTTCAGGAAATGATACGCCAGTTGCGGAGAAAGCATGCCCCTGCGGATTGGGAATTTGTTCAGTACTAACTGCGAAAACGGATAGGAATCGCGGTCGAAAATTTTACGCATGCCCCGTTCGGCAGGAAAATGGTGGCTGCGGATTCTTTGAGTGGTGTGACAGTGCCCCTGTAACTAATCTAATGACTTATGGAAGCCAAAATCCATCAAGTTCGTCATTTCCAGACCTTCAGTGCCCCTGTGGTGCTGGTTCTTGCAGAATTCTAACAGCTAAAACAGTGGAAAACGTTGGGAAGCAGTTCTATCGTTGCCCTTCATTCCAGGCACCTTGCGGGTTTTTCCAGTGGTGCAAAGATCCTTTCATGGAAACCGAGAATCAAGTGAGTGCCCCTAAGGCCTACGGTAACACAAATGACACGAGCAAAAGTGTTACAACGAATGTGAAAACTGGTTCTTCCAGTTCCTTCTATAAACATGGGGGTGAAGGGCATTCGGCTAAAGACTACTCGCAATCACTCTCATCATCAAATCCTCCTGCAGAATATGGCGGAAGTCAATCTTCTTCACTTGGAAGCTGTTTCAAATGTGGTAAGGCTGGCCATTGGGCGAAGGACTGCTCTAATTCTTAA MKNSTQWRTAAEVISLVNKVRNIPKPTIDLPKMPLRRFRITPLKGNPVLPQVSGSKANSDNNVSISANTTAQSEGGGSCFKCGKLGHWARDCDAPGGGGSFSSSGNDTPVAEKACPCGLGICSVLTAKTDRNRGRKFYACPVRQENGGCGFFEWCDSAPVTNLMTYGSQNPSSSSFPDLQCPCGAGSCRILTAKTVENVGKQFYRCPSFQAPCGFFQWCKDPFMETENQVSAPKAYGNTNDTSKSVTTNVKTGSSSSFYKHGGEGHSAKDYSQSLSSSNPPAEYGGSQSSSLGSCFKCGKAGHWAKDCSNS Homology
BLAST of PI0018025 vs. ExPASy Swiss-Prot
Match: Q3MHN7 (Endonuclease 8-like 3 OS=Bos taurus OX=9913 GN=NEIL3 PE=2 SV=2) HSP 1 Score: 54.7 bits (130), Expect = 2.2e-06 Identity = 50/180 (27.78%), Postives = 71/180 (39.44%), Query Frame = 0
BLAST of PI0018025 vs. ExPASy Swiss-Prot
Match: Q94C69 (Cold shock domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=CSP3 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.1e-05 Identity = 65/255 (25.49%), Postives = 93/255 (36.47%), Query Frame = 0
BLAST of PI0018025 vs. ExPASy Swiss-Prot
Match: Q8RWN5 (Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana OX=3702 GN=RZ1C PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 2.1e-04 Identity = 27/62 (43.55%), Postives = 34/62 (54.84%), Query Frame = 0
BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A0A0KVB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G062410 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 6.6e-131 Identity = 237/321 (73.83%), Postives = 259/321 (80.69%), Query Frame = 0
BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A6J1JBZ0 (cold shock domain-containing protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483073 PE=4 SV=1) HSP 1 Score: 412.9 bits (1060), Expect = 1.2e-111 Identity = 215/319 (67.40%), Postives = 241/319 (75.55%), Query Frame = 0
BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A6J1EZ11 (cold shock domain-containing protein 3-like OS=Cucurbita moschata OX=3662 GN=LOC111437513 PE=4 SV=1) HSP 1 Score: 401.4 bits (1030), Expect = 3.5e-108 Identity = 211/318 (66.35%), Postives = 233/318 (73.27%), Query Frame = 0
BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A6J1C4N6 (DNA-binding protein HEXBP-like OS=Momordica charantia OX=3673 GN=LOC111008238 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106 Identity = 209/326 (64.11%), Postives = 233/326 (71.47%), Query Frame = 0
BLAST of PI0018025 vs. ExPASy TrEMBL
Match: A0A1S4DYV0 (DNA-binding protein HEXBP-like OS=Cucumis melo OX=3656 GN=LOC103493251 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 5.1e-99 Identity = 183/235 (77.87%), Postives = 194/235 (82.55%), Query Frame = 0
BLAST of PI0018025 vs. NCBI nr
Match: XP_004147743.1 (DNA topoisomerase 3-alpha [Cucumis sativus]) HSP 1 Score: 476.9 bits (1226), Expect = 1.4e-130 Identity = 237/321 (73.83%), Postives = 259/321 (80.69%), Query Frame = 0
BLAST of PI0018025 vs. NCBI nr
Match: XP_038903890.1 (cold shock domain-containing protein 3-like [Benincasa hispida]) HSP 1 Score: 443.4 bits (1139), Expect = 1.7e-120 Identity = 227/316 (71.84%), Postives = 251/316 (79.43%), Query Frame = 0
BLAST of PI0018025 vs. NCBI nr
Match: XP_022984959.1 (cold shock domain-containing protein 3-like [Cucurbita maxima]) HSP 1 Score: 412.9 bits (1060), Expect = 2.4e-111 Identity = 215/319 (67.40%), Postives = 241/319 (75.55%), Query Frame = 0
BLAST of PI0018025 vs. NCBI nr
Match: XP_023552737.1 (cold shock domain-containing protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 412.1 bits (1058), Expect = 4.1e-111 Identity = 214/319 (67.08%), Postives = 240/319 (75.24%), Query Frame = 0
BLAST of PI0018025 vs. NCBI nr
Match: XP_022931285.1 (cold shock domain-containing protein 3-like [Cucurbita moschata]) HSP 1 Score: 401.4 bits (1030), Expect = 7.3e-108 Identity = 211/318 (66.35%), Postives = 233/318 (73.27%), Query Frame = 0
BLAST of PI0018025 vs. TAIR 10
Match: AT3G42860.1 (zinc knuckle (CCHC-type) family protein ) HSP 1 Score: 205.7 bits (522), Expect = 5.5e-53 Identity = 121/286 (42.31%), Postives = 163/286 (56.99%), Query Frame = 0
BLAST of PI0018025 vs. TAIR 10
Match: AT5G13920.1 (GRF zinc finger / Zinc knuckle protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.7e-09 Identity = 29/66 (43.94%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of PI0018025 vs. TAIR 10
Match: AT1G54930.1 (GRF zinc finger / Zinc knuckle protein ) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-09 Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0
BLAST of PI0018025 vs. TAIR 10
Match: AT2G17870.1 (cold shock domain protein 3 ) HSP 1 Score: 50.4 bits (119), Expect = 2.9e-06 Identity = 65/255 (25.49%), Postives = 93/255 (36.47%), Query Frame = 0
BLAST of PI0018025 vs. TAIR 10
Match: AT5G04280.1 (RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain ) HSP 1 Score: 48.1 bits (113), Expect = 1.5e-05 Identity = 27/62 (43.55%), Postives = 34/62 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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