PI0017939 (gene) Melon (PI 482460) v1

Overview


Name	PI0017939
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Ferredoxin
Location	chr06: 9121200 .. 9122796 (-)
RNA-Seq Expression	PI0017939
Synteny	PI0017939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGAAAAAAGAAAAAAGAAAAAGAATGTTTATTGTATAGTTTCTAGAGAGAGGCTTAAAATGATGTAGAAGATTAGATCAAGGCCATATAACTGTTGGAAGCTAGAGGAGCGTGTGGAAGCCATGGCCTCTCATTCCCATGGTCCCATGATTGTTGATAAAATGAGAGTATTAGCTCGTAGCCTTTCATTTCATTTCCTATCTACAGGTGTGGGCTCCTCTTGTACTATAAGCTGAGGAAGGTATACAAACAAGGTCCAGAAGGCAGTAGCCATTCATCTTGGTAGAGCAGCAAAATGGCCAGTTCACCAGCACTTTCCAGTGTGACGTTGAACACCTCCTTCCTCCGGAAGCAGCCAGCAACTAGGATAAGTTCGGTGTTGAACTTTGGCCAAGATCTGTTTGGGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGTGTACAAAGTGAAGCTGATCACACCAGCAGGAGTGTGGGAGTTCGAGTGCCCGGATGAGCAATACATTCTAGATCAAGCTGAGGAAACGGGATATGATCTTCCATATTCATGTAGGGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGACGATGAACAGATGGATGATGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACGCACAAGGAGGAAGAACTTGTTAGTTAGTTAAGTCTGCTCCAAGATCTAGTTATTTATCTCCATTAAATAAATTCTTGTTTACCTTCAGGTCCTTAATCAGATGTCTCATGGAGTATTTCATCTTCTCTTACTTTTATTTATTATTCACTACCATTCTAAAACCAATCTTAGGCCAGAGTTCATATTGATACTTTTGTGAAAATTTTAGGGTTTAAATTGTTACAATTATTTAGTTTAGAGTTTAATTGGTATAACTCTAAAGTTCAGAGTTCAAATTGATATAACCTCAAACTTCAGGGTTTAAATTAATATAATTTATTAGTTTAGAGTTTAAATTGATACAACTTCTAAAATTTAGAGGTATAAATTGATATTTGTTCTAATTTTAAATAACACCATTATGCAACAGATTATCAACAACTAAGGTCCTCATTTCAAGCAGAAAATACCCCACTATCGTAATTAGAGCATAAAACACACCACTAACATAATTAAAGTCTCAACGAGCTTTTTCAGTAAAATCCATAAAGGGAGCATTCTTAGTTTACATCAGGTTCGCGGACAGCACGTTGAGAGCACGAATAATGTTGTCTAACAAGTTCGATTATACCCACGAAGGATGGTTGTTGATAATATAACCTCCCCTACCAATACTTCAATGGGCAACTTCTAGTTAAAATACGTGTTCCACCGTGTAAATAGATCTTGGAGAGTAACAAACTGTCCACCCCACCCCTCCAACCACCTATCCTAACAACTCCCACGCCTCACTTACATCAAGAAAGCTGAAGACTTATCATTCTATCTTGAAGATGCAATGAAGATTGAACTTCTCATCATCGCTATATAAGGAATGAAGCTAATTTTTGTAGCTCCACAA

mRNA sequence

AAAAGAAAAAAGAAAAAAGAAAAAGAATGTTTATTGTATAGTTTCTAGAGAGAGGCTTAAAATGATGTAGAAGATTAGATCAAGGCCATATAACTGTTGGAAGCTAGAGGAGCGTGTGGAAGCCATGGCCTCTCATTCCCATGGTCCCATGATTGTTGATAAAATGAGAGTATTAGCTCGTAGCCTTTCATTTCATTTCCTATCTACAGGTGTGGGCTCCTCTTGTACTATAAGCTGAGGAAGGTATACAAACAAGGTCCAGAAGGCAGTAGCCATTCATCTTGGTAGAGCAGCAAAATGGCCAGTTCACCAGCACTTTCCAGTGTGACGTTGAACACCTCCTTCCTCCGGAAGCAGCCAGCAACTAGGATAAGTTCGGTGTTGAACTTTGGCCAAGATCTGTTTGGGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGTGTACAAAGTGAAGCTGATCACACCAGCAGGAGTGTGGGAGTTCGAGTGCCCGGATGAGCAATACATTCTAGATCAAGCTGAGGAAACGGGATATGATCTTCCATATTCATGTAGGGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGACGATGAACAGATGGATGATGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACGCACAAGGAGGAAGAACTTGTTAGTTAGTTAAGTCTGCTCCAAGATCTAGTTATTTATCTCCATTAAATAAATTCTTGTTTACCTTCAGGTCCTTAATCAGATGTCTCATGGAGTATTTCATCTTCTCTTACTTTTATTTATTATTCACTACCATTCTAAAACCAATCTTAGGCCAGAGTTCATATTGATACTTTTGTGAAAATTTTAGGGTTTAAATTGTTACAATTATTTAGTTTAGAGTTTAATTGGTATAACTCTAAAGTTCAGAGTTCAAATTGATATAACCTCAAACTTCAGGGTTTAAATTAATATAATTTATTAGTTTAGAGTTTAAATTGATACAACTTCTAAAATTTAGAGGTATAAATTGATATTTGTTCTAATTTTAAATAACACCATTATGCAACAGATTATCAACAACTAAGGTCCTCATTTCAAGCAGAAAATACCCCACTATCGTAATTAGAGCATAAAACACACCACTAACATAATTAAAGTCTCAACGAGCTTTTTCAGTAAAATCCATAAAGGGAGCATTCTTAGTTTACATCAGGTTCGCGGACAGCACGTTGAGAGCACGAATAATGTTGTCTAACAAGTTCGATTATACCCACGAAGGATGGTTGTTGATAATATAACCTCCCCTACCAATACTTCAATGGGCAACTTCTAGTTAAAATACGTGTTCCACCGTGTAAATAGATCTTGGAGAGTAACAAACTGTCCACCCCACCCCTCCAACCACCTATCCTAACAACTCCCACGCCTCACTTACATCAAGAAAGCTGAAGACTTATCATTCTATCTTGAAGATGCAATGAAGATTGAACTTCTCATCATCGCTATATAAGGAATGAAGCTAATTTTTGTAGCTCCACAA

Coding sequence (CDS)

ATGGCCAGTTCACCAGCACTTTCCAGTGTGACGTTGAACACCTCCTTCCTCCGGAAGCAGCCAGCAACTAGGATAAGTTCGGTGTTGAACTTTGGCCAAGATCTGTTTGGGCTGAAGGGTGGCAGCAGCCGAGGTGGGCGAGTGATTGCAATGGCAGTGTACAAAGTGAAGCTGATCACACCAGCAGGAGTGTGGGAGTTCGAGTGCCCGGATGAGCAATACATTCTAGATCAAGCTGAGGAAACGGGATATGATCTTCCATATTCATGTAGGGCAGGGTCTTGCTCTTCTTGTGCAGGGAAAGTAGTATCAGGGAAGGTGGATCAGTCAGATGGGAGCTACCTTGACGATGAACAGATGGATGATGGTTGGGTTTTAACTTGTGTTGCTTACCCGCAGTCAGATGTTGTCATTGAGACGCACAAGGAGGAAGAACTTGTTAGTTAG

Protein sequence

MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLITPAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQMDDGWVLTCVAYPQSDVVIETHKEEELVS

Homology

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BLAST of PI0017939 vs. ExPASy Swiss-Prot
Match: Q9ZTS2 (Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.4e-49
Identity = 93/143 (65.03%), Postives = 116/143 (81.12%), Query Frame = 0


Query: 6   ALSSVTLNTSFLRKQPA-TRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLITPAGV 65
           ++S+  ++TSF+ ++PA T +  + N G+ LFGLK  S+ GG+V  MA YKVKLITP G 
Sbjct: 3   SVSATMISTSFMPRKPAVTSLKPIPNVGEALFGLK--SANGGKVTCMASYKVKLITPDGP 62

Query: 66  WEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQMDDGW 125
            EF+CPD  YILDQAEE G+DLPYSCRAGSCSSCAGK+  G VDQ+DG++LDD+Q+++GW
Sbjct: 63  IEFDCPDNVYILDQAEEAGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGW 122

Query: 126 VLTCVAYPQSDVVIETHKEEELV 148
           VLTCVAYPQSDV IETHKE ELV
Sbjct: 123 VLTCVAYPQSDVTIETHKEAELV 143

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BLAST of PI0017939 vs. ExPASy Swiss-Prot
Match: P09911 (Ferredoxin-1, chloroplastic OS=Pisum sativum OX=3888 GN=PETF PE=1 SV=2)

HSP 1 Score: 191.0 bits (484), Expect = 9.3e-48
Identity = 95/149 (63.76%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQP-ATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLI 60
           MA++PAL    ++TSFLR QP    +++   F     GLK    RG   +AMA YKVKL+
Sbjct: 1   MATTPALYGTAVSTSFLRTQPMPMSVTTTKAFSNGFLGLKTSLKRGDLAVAMASYKVKLV 60

Query: 61  TPAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQ 120
           TP G  EFECP + YILD AEE G DLPYSCRAGSCSSCAGKVV G+VDQSDGS+LDDEQ
Sbjct: 61  TPDGTQEFECPSDVYILDHAEEVGIDLPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQ 120

Query: 121 MDDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++ G+VLTCVAYP SDVVIETHKEE+L +
Sbjct: 121 IEAGFVLTCVAYPTSDVVIETHKEEDLTA 149

[Close]

BLAST of PI0017939 vs. ExPASy Swiss-Prot
Match: O04090 (Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-47
Identity = 97/147 (65.99%), Postives = 112/147 (76.19%), Query Frame = 0


Query: 3   SSPALSSVTLNTSFLRKQPATRISSVLNFG--QDLFGLKGGSSRGGRVIAMAVYKVKLIT 62
           +S ALSS  ++TSFLR+Q        L F   Q LFGLK  ++RGGRV AMA YKVK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 63  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 122
           P G  E EC ++ Y+LD AEE G DLPYSCRAGSCSSCAGKVVSG +DQSD S+LDDEQM
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 123 DDGWVLTCVAYPQSDVVIETHKEEELV 148
            +G+VLTCVAYP SDVVIETHKEE ++
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEEAIM 148

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BLAST of PI0017939 vs. ExPASy Swiss-Prot
Match: O04683 (Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.6e-47
Identity = 94/147 (63.95%), Postives = 110/147 (74.83%), Query Frame = 0


Query: 2   ASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLITP 61
           A++ ALS  T++T+F  K P    +   N G+ LFGLK  +SR GRV AMA YKV L+TP
Sbjct: 3   ATTAALSGATMSTAFAPKTPPMTAALPTNVGRALFGLKSSASR-GRVTAMAAYKVTLVTP 62

Query: 62  AGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQMD 121
            G  E ECPD+ YILD AEE G DLPYSCRAGSCSSCAGKV SG V+Q DGS+LDD+Q+ 
Sbjct: 63  EGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCSSCAGKVTSGSVNQDDGSFLDDDQIK 122

Query: 122 DGWVLTCVAYPQSDVVIETHKEEELVS 149
           +GWVLTCVAYP  DV IETHKEEEL +
Sbjct: 123 EGWVLTCVAYPTGDVTIETHKEEELTA 148

[Close]

BLAST of PI0017939 vs. ExPASy Swiss-Prot
Match: P16972 (Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 2.1e-47
Identity = 97/147 (65.99%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 3   SSPALSSVTLNTSFLRKQPA-TRISSVLNFG-QDLFGLKGGSSRGGRVIAMAVYKVKLIT 62
           +S ALSS  + TSF+R+ PA   + S+ +   Q LFGLK G++RGGRV AMA YKVK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 63  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 122
           P G  E EC D+ Y+LD AEE G DLPYSCRAGSCSSCAGKVVSG VDQSD S+LDDEQ+
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 123 DDGWVLTCVAYPQSDVVIETHKEEELV 148
            +G+VLTC AYP SDV IETHKEE++V
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEEDIV 148

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BLAST of PI0017939 vs. ExPASy TrEMBL
Match: A0A5D3CHZ7 (Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00080 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MASSPALSS TLNTSFLRKQPATR+ SVLNFGQDLFGLKGGSSRGGRVIAMA Y VKLIT
Sbjct: 1   MASSPALSSATLNTSFLRKQPATRLGSVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           PAG  EF+C D+ YILD+AEE G+DLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLD++QM
Sbjct: 61  PAGETEFKCQDDDYILDRAEEMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDEDQM 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++GWVLTCVAYPQSDVVIETHKEE L S
Sbjct: 121 NEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of PI0017939 vs. ExPASy TrEMBL
Match: A0A1S3C2F7 (Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496101 PE=3 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.6e-66
Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MASSPALSS TLNTSFLRKQPATR+ SVLNFGQDLFGLKGGSSRGGRVIAMA Y VKLIT
Sbjct: 1   MASSPALSSATLNTSFLRKQPATRLGSVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           PAG  EF+C D+ YILD+AEE G+DLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLD++QM
Sbjct: 61  PAGETEFKCQDDDYILDRAEEMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDEDQM 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++GWVLTCVAYPQSDVVIETHKEE L S
Sbjct: 121 NEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of PI0017939 vs. ExPASy TrEMBL
Match: A0A0A0LAD3 (Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G222790 PE=3 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 1.5e-64
Identity = 125/148 (84.46%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           M SSPALSSVTLNTSFL+KQP TRI  VLNFGQDLF LKGGSSRGGRVIAMA Y VKLIT
Sbjct: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           P G  EF+CPD++YILD+AE+ G+DLPYSCRAGSCSSCAGKVVSGKVDQSDGSYL+D+QM
Sbjct: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           D+GWVLTCVAYPQSDVVIETHKEE L S
Sbjct: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of PI0017939 vs. ExPASy TrEMBL
Match: A0A6J1C815 (Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111008273 PE=3 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.1e-59
Identity = 117/148 (79.05%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MASS ALS   ++TSFLRKQPA  + SV NFGQ LFGLKGG SRGGRV AMA YKVKLIT
Sbjct: 1   MASSTALSGAMMSTSFLRKQPAGGLRSVSNFGQGLFGLKGG-SRGGRVTAMATYKVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           P G  EF CPD+ Y+LDQAEE G+DLPYSCRAGSCSSCAGKVVSGKVDQSD S+LDD+Q+
Sbjct: 61  PEGEKEFSCPDDVYVLDQAEEQGFDLPYSCRAGSCSSCAGKVVSGKVDQSDNSFLDDDQL 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++GWVLTCVAYPQSD+VIETHKEEELVS
Sbjct: 121 EEGWVLTCVAYPQSDIVIETHKEEELVS 147

[Close]

BLAST of PI0017939 vs. ExPASy TrEMBL
Match: A0A6J1JBU5 (Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111483022 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 9.7e-56
Identity = 111/148 (75.00%), Postives = 126/148 (85.14%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MAS+P LS  T+NT  L+KQPAT + SV NFGQ LFGLK  S+ GGR++A AVY VKL+T
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLK-DSTLGGRLVAKAVYSVKLLT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           P G  EF CPD+ YILDQAEE G DLPYSCRAGSCSSCAGKVV GKV+QSDGSYLDD+Q+
Sbjct: 61  PEGEKEFMCPDDVYILDQAEEIGIDLPYSCRAGSCSSCAGKVVGGKVEQSDGSYLDDDQI 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           +DGWVLTCVAYPQS++VIETHKEEELVS
Sbjct: 121 EDGWVLTCVAYPQSNIVIETHKEEELVS 147

[Close]

BLAST of PI0017939 vs. NCBI nr
Match: XP_008456053.1 (PREDICTED: ferredoxin-like [Cucumis melo] >KAA0038972.1 ferredoxin-like [Cucumis melo var. makuwa] >TYK11175.1 ferredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 9.5e-66
Identity = 128/148 (86.49%), Postives = 137/148 (92.57%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MASSPALSS TLNTSFLRKQPATR+ SVLNFGQDLFGLKGGSSRGGRVIAMA Y VKLIT
Sbjct: 1   MASSPALSSATLNTSFLRKQPATRLGSVLNFGQDLFGLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           PAG  EF+C D+ YILD+AEE G+DLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLD++QM
Sbjct: 61  PAGETEFKCQDDDYILDRAEEMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDEDQM 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++GWVLTCVAYPQSDVVIETHKEE L S
Sbjct: 121 NEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of PI0017939 vs. NCBI nr
Match: XP_004146260.1 (ferredoxin [Cucumis sativus] >KGN57597.1 hypothetical protein Csa_010533 [Cucumis sativus])

HSP 1 Score: 255.4 bits (651), Expect = 3.1e-64
Identity = 125/148 (84.46%), Postives = 135/148 (91.22%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           M SSPALSSVTLNTSFL+KQP TRI  VLNFGQDLF LKGGSSRGGRVIAMA Y VKLIT
Sbjct: 1   MTSSPALSSVTLNTSFLQKQPTTRIRLVLNFGQDLFKLKGGSSRGGRVIAMAEYNVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           P G  EF+CPD++YILD+AE+ G+DLPYSCRAGSCSSCAGKVVSGKVDQSDGSYL+D+QM
Sbjct: 61  PTGETEFKCPDDEYILDRAEQMGFDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLEDDQM 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           D+GWVLTCVAYPQSDVVIETHKEE L S
Sbjct: 121 DEGWVLTCVAYPQSDVVIETHKEEYLFS 148

[Close]

BLAST of PI0017939 vs. NCBI nr
Match: XP_022136608.1 (ferredoxin [Momordica charantia])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 117/148 (79.05%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MASS ALS   ++TSFLRKQPA  + SV NFGQ LFGLKGG SRGGRV AMA YKVKLIT
Sbjct: 1   MASSTALSGAMMSTSFLRKQPAGGLRSVSNFGQGLFGLKGG-SRGGRVTAMATYKVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           P G  EF CPD+ Y+LDQAEE G+DLPYSCRAGSCSSCAGKVVSGKVDQSD S+LDD+Q+
Sbjct: 61  PEGEKEFSCPDDVYVLDQAEEQGFDLPYSCRAGSCSSCAGKVVSGKVDQSDNSFLDDDQL 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++GWVLTCVAYPQSD+VIETHKEEELVS
Sbjct: 121 EEGWVLTCVAYPQSDIVIETHKEEELVS 147

[Close]

BLAST of PI0017939 vs. NCBI nr
Match: XP_038891717.1 (ferredoxin-A-like [Benincasa hispida])

HSP 1 Score: 235.3 bits (599), Expect = 3.3e-58
Identity = 115/148 (77.70%), Postives = 129/148 (87.16%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MAS PALS  T+NTSFLRKQPATR+ S  NF Q LFGLKGG SRGGRVIAMA Y VKLIT
Sbjct: 1   MASIPALSGATMNTSFLRKQPATRLRSASNFSQGLFGLKGG-SRGGRVIAMAEYNVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           P G  EF CPD++YILD+A++ G DLPYSCRAGSCSSCAGKV+ GKVDQSDG++LDD+Q 
Sbjct: 61  PEGEKEFSCPDDEYILDRADDLGIDLPYSCRAGSCSSCAGKVIEGKVDQSDGNFLDDDQA 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++GWVLTCVAYPQS+VVIETHKEEELVS
Sbjct: 121 EEGWVLTCVAYPQSNVVIETHKEEELVS 147

[Close]

BLAST of PI0017939 vs. NCBI nr
Match: XP_023552303.1 (ferredoxin-like [Cucurbita pepo subsp. pepo] >KAG7015006.1 hypothetical protein SDJN02_22637, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 230.7 bits (587), Expect = 8.1e-57
Identity = 112/148 (75.68%), Postives = 128/148 (86.49%), Query Frame = 0


Query: 1   MASSPALSSVTLNTSFLRKQPATRISSVLNFGQDLFGLKGGSSRGGRVIAMAVYKVKLIT 60
           MAS+P LS  T+NT  L+KQPAT + SV NFGQ LFGLK GSSRGGR++AMA Y VKLIT
Sbjct: 1   MASAPVLSGATINTILLQKQPATSLRSVSNFGQGLFGLK-GSSRGGRLVAMAEYNVKLIT 60

Query: 61  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 120
           P G  EF CPD+ Y+LDQAEE G DLPYSCRAGSCSSCAGKVV GKV+QSDGS+LDD+Q+
Sbjct: 61  PEGEKEFVCPDDVYVLDQAEEMGIDLPYSCRAGSCSSCAGKVVGGKVEQSDGSFLDDDQI 120

Query: 121 DDGWVLTCVAYPQSDVVIETHKEEELVS 149
           ++GWVLTCVAYPQSD+VIETHKEE+LVS
Sbjct: 121 EEGWVLTCVAYPQSDIVIETHKEEDLVS 147

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BLAST of PI0017939 vs. TAIR 10
Match: AT1G10960.1 (ferredoxin 1 )

HSP 1 Score: 190.3 bits (482), Expect = 1.1e-48
Identity = 97/147 (65.99%), Postives = 112/147 (76.19%), Query Frame = 0


Query: 3   SSPALSSVTLNTSFLRKQPATRISSVLNFG--QDLFGLKGGSSRGGRVIAMAVYKVKLIT 62
           +S ALSS  ++TSFLR+Q        L F   Q LFGLK  ++RGGRV AMA YKVK IT
Sbjct: 2   ASTALSSAIVSTSFLRRQQTPISLRSLPFANTQSLFGLKSSTARGGRVTAMATYKVKFIT 61

Query: 63  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 122
           P G  E EC ++ Y+LD AEE G DLPYSCRAGSCSSCAGKVVSG +DQSD S+LDDEQM
Sbjct: 62  PEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSCSSCAGKVVSGSIDQSDQSFLDDEQM 121

Query: 123 DDGWVLTCVAYPQSDVVIETHKEEELV 148
            +G+VLTCVAYP SDVVIETHKEE ++
Sbjct: 122 SEGYVLTCVAYPTSDVVIETHKEEAIM 148

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BLAST of PI0017939 vs. TAIR 10
Match: AT1G60950.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 189.9 bits (481), Expect = 1.5e-48
Identity = 97/147 (65.99%), Postives = 114/147 (77.55%), Query Frame = 0


Query: 3   SSPALSSVTLNTSFLRKQPA-TRISSVLNFG-QDLFGLKGGSSRGGRVIAMAVYKVKLIT 62
           +S ALSS  + TSF+R+ PA   + S+ +   Q LFGLK G++RGGRV AMA YKVK IT
Sbjct: 2   ASTALSSAIVGTSFIRRSPAPISLRSLPSANTQSLFGLKSGTARGGRVTAMATYKVKFIT 61

Query: 63  PAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLDDEQM 122
           P G  E EC D+ Y+LD AEE G DLPYSCRAGSCSSCAGKVVSG VDQSD S+LDDEQ+
Sbjct: 62  PEGELEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGSVDQSDQSFLDDEQI 121

Query: 123 DDGWVLTCVAYPQSDVVIETHKEEELV 148
            +G+VLTC AYP SDV IETHKEE++V
Sbjct: 122 GEGFVLTCAAYPTSDVTIETHKEEDIV 148

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BLAST of PI0017939 vs. TAIR 10
Match: AT2G27510.1 (ferredoxin 3 )

HSP 1 Score: 151.0 bits (380), Expect = 7.6e-37
Identity = 79/150 (52.67%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 7   LSSVTLNTSFLRKQPATRISSVLNFGQDL---------FGLKGGSSRGGRVIAMAVYKVK 66
           +SS ++  + LR Q   ++ +  ++   +         FGLK  ++ GG  ++ AVYKVK
Sbjct: 6   ISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMS-AVYKVK 65

Query: 67  LITPAGVW-EFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSGKVDQSDGSYLD 126
           L+ P G   EFE  D+QYILD AEE G DLPYSCRAG+CS+CAG++VSG VDQSDGS+L+
Sbjct: 66  LLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDGSFLE 125

Query: 127 DEQMDDGWVLTCVAYPQSDVVIETHKEEEL 147
           D  ++ G+VLTCVAYPQSD VI THKE EL
Sbjct: 126 DSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154

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BLAST of PI0017939 vs. TAIR 10
Match: AT5G10000.1 (ferredoxin 4 )

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-26
Identity = 56/113 (49.56%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 36  FGLKGGSSRGGRVIAMAVYKVKLITPAG-VWEFECPDEQYILDQAEETGYDLPYSCRAGS 95
           FGL       G+V A    KVKLI+P G   E E  ++  IL+ AE  G +LPYSCR+G+
Sbjct: 36  FGLSSSRGNFGKVFAKESRKVKLISPEGEEQEIEGNEDCCILESAENAGLELPYSCRSGT 95

Query: 96  CSSCAGKVVSGKVDQSDGSYLDDEQMDDGWVLTCVAYPQSDVVIETHKEEELV 148
           C +C GK+VSGKVDQS GS+L++EQ+  G++LTC+A P  D V+ THK+ +L+
Sbjct: 96  CGTCCGKLVSGKVDQSLGSFLEEEQIQKGYILTCIALPLEDCVVYTHKQSDLI 148

[Close]

BLAST of PI0017939 vs. TAIR 10
Match: AT4G14890.1 (2Fe-2S ferredoxin-like superfamily protein )

HSP 1 Score: 81.6 bits (200), Expect = 5.7e-16
Identity = 44/103 (42.72%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 46  GRVIAMAVYKVKLITPAGVWEFECPDEQYILDQAEETGYDLPYSCRAGSCSSCAGKVVSG 105
           GR+IA A YKV +       E E   ++ IL +A ++G D+PY C  G C +C  K+V+G
Sbjct: 46  GRIIARA-YKVVVEHDGKTTELEVEPDETILSKALDSGLDVPYDCNLGVCMTCPAKLVTG 105

Query: 106 KVDQSDGSYLDDEQMDDGWVLTCVAYPQSDVVIETHKEEELVS 149
            VDQS G  L D+ ++ G+ L C +YP SD  I+   EEEL+S
Sbjct: 106 TVDQS-GGMLSDDVVERGYTLLCASYPTSDCHIKMIPEEELLS 146

The following BLAST results are available for this feature:

BLAST of PI0017939 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZTS2	8.4e-49	65.03	Ferredoxin, chloroplastic OS=Capsicum annuum OX=4072 GN=AP1 PE=1 SV=1	[more]
P09911	9.3e-48	63.76	Ferredoxin-1, chloroplastic OS=Pisum sativum OX=3888 GN=PETF PE=1 SV=2	[more]
O04090	1.6e-47	65.99	Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD1 PE=1 SV=1	[more]
O04683	1.6e-47	63.95	Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum OX=3544 PE=2 SV=1	[more]
P16972	2.1e-47	65.99	Ferredoxin-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FD2 PE=1 SV=1	[more]

BLAST of PI0017939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CHZ7	4.6e-66	86.49	Ferredoxin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00080 PE=...	[more]
A0A1S3C2F7	4.6e-66	86.49	Ferredoxin OS=Cucumis melo OX=3656 GN=LOC103496101 PE=3 SV=1	[more]
A0A0A0LAD3	1.5e-64	84.46	Ferredoxin OS=Cucumis sativus OX=3659 GN=Csa_3G222790 PE=3 SV=1	[more]
A0A6J1C815	7.1e-59	79.05	Ferredoxin OS=Momordica charantia OX=3673 GN=LOC111008273 PE=3 SV=1	[more]
A0A6J1JBU5	9.7e-56	75.00	Ferredoxin OS=Cucurbita maxima OX=3661 GN=LOC111483022 PE=3 SV=1	[more]

BLAST of PI0017939 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456053.1	9.5e-66	86.49	PREDICTED: ferredoxin-like [Cucumis melo] >KAA0038972.1 ferredoxin-like [Cucumis...	[more]
XP_004146260.1	3.1e-64	84.46	ferredoxin [Cucumis sativus] >KGN57597.1 hypothetical protein Csa_010533 [Cucumi...	[more]
XP_022136608.1	1.5e-58	79.05	ferredoxin [Momordica charantia]	[more]
XP_038891717.1	3.3e-58	77.70	ferredoxin-A-like [Benincasa hispida]	[more]
XP_023552303.1	8.1e-57	75.68	ferredoxin-like [Cucurbita pepo subsp. pepo] >KAG7015006.1 hypothetical protein ...	[more]

BLAST of PI0017939 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10960.1	1.1e-48	65.99	ferredoxin 1	[more]
AT1G60950.1	1.5e-48	65.99	2Fe-2S ferredoxin-like superfamily protein	[more]
AT2G27510.1	7.6e-37	52.67	ferredoxin 3	[more]
AT5G10000.1	2.1e-26	49.56	ferredoxin 4	[more]
AT4G14890.1	5.7e-16	42.72	2Fe-2S ferredoxin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PFAM	PF00111	Fer2	coord: 63..133 e-value: 1.6E-19 score: 69.6
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	PROSITE	PS51085	2FE2S_FER_2	coord: 54..144 score: 12.40698
IPR001041	2Fe-2S ferredoxin-type iron-sulfur binding domain	CDD	cd00207	fer2	coord: 56..139 e-value: 7.37642E-33 score: 109.407
IPR010241	Ferredoxin [2Fe-2S], plant	TIGRFAM	TIGR02008	TIGR02008	coord: 52..146 e-value: 2.0E-48 score: 160.2
IPR012675	Beta-grasp domain superfamily	GENE3D	3.10.20.30		coord: 51..148 e-value: 1.7E-37 score: 129.2
None	No IPR available	PANTHER	PTHR43112	FERREDOXIN	coord: 1..146
None	No IPR available	PANTHER	PTHR43112:SF20	FERREDOXIN	coord: 1..146
IPR006058	2Fe-2S ferredoxin, iron-sulphur binding site	PROSITE	PS00197	2FE2S_FER_1	coord: 90..98
IPR036010	2Fe-2S ferredoxin-like superfamily	SUPERFAMILY	54292	2Fe-2S ferredoxin-like	coord: 34..145

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017939.1	PI0017939.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0006124	ferredoxin metabolic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051536	iron-sulfur cluster binding