PI0017911 (gene) Melon (PI 482460) v1

Overview
NamePI0017911
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 24522198 .. 24522761 (-)
RNA-Seq ExpressionPI0017911
SyntenyPI0017911
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTTTTTCCATCTCCATTCTTCAATTTCTCTTCACTAATCAACCACATCCCTCAATTTCAAATGGCTTCTTCCCTCAAAACCCTAGTTTCAATACTGTTTATCACTCTCTTAATCTTACTCTCTCAAACTCTCCCCACTTCGTCTGCTATAGTTCACGGCAGAGCTTCTGATTCTCTCACTGAAAATTTTCACCGAAACCTCCTTCAAGCGATGGATCGTCATCAGGCTGATGGTAGAAGGCGAACTCGACGAACCGTAGTGAGAGATCAAGCCGAAGCTCCGAGTCCATCGACTGCAAATCCGAGCCAAACGTTGTCATTCGGGGTTGGCTCTGTCCTGAGTCTTCTTATTGTTGTTGGTCTATTTGTTTGAGTGAAATAACGTTGCCTTTATTATTGTTGTTGTTGTTGTTGTTTCTTTATTAATGAACAATTAGATTGTATTATTATTGTTATGGTTTTGTTTTTATTGAGAAGGTTTTGGGTTTGTGTATTTATTGATGAAAAGAAAATATTGGACTGTATTTATATATTATATATTAATTAATTGTGATCTAATTAAC

mRNA sequence

ATTTTTTTCCATCTCCATTCTTCAATTTCTCTTCACTAATCAACCACATCCCTCAATTTCAAATGGCTTCTTCCCTCAAAACCCTAGTTTCAATACTGTTTATCACTCTCTTAATCTTACTCTCTCAAACTCTCCCCACTTCGTCTGCTATAGTTCACGGCAGAGCTTCTGATTCTCTCACTGAAAATTTTCACCGAAACCTCCTTCAAGCGATGGATCGTCATCAGGCTGATGGTAGAAGGCGAACTCGACGAACCGTAGTGAGAGATCAAGCCGAAGCTCCGAGTCCATCGACTGCAAATCCGAGCCAAACGTTGTCATTCGGGGTTGGCTCTGTCCTGAGTCTTCTTATTGTTGTTGGTCTATTTGTTTGAGTGAAATAACGTTGCCTTTATTATTGTTGTTGTTGTTGTTGTTTCTTTATTAATGAACAATTAGATTGTATTATTATTGTTATGGTTTTGTTTTTATTGAGAAGGTTTTGGGTTTGTGTATTTATTGATGAAAAGAAAATATTGGACTGTATTTATATATTATATATTAATTAATTGTGATCTAATTAAC

Coding sequence (CDS)

ATGGCTTCTTCCCTCAAAACCCTAGTTTCAATACTGTTTATCACTCTCTTAATCTTACTCTCTCAAACTCTCCCCACTTCGTCTGCTATAGTTCACGGCAGAGCTTCTGATTCTCTCACTGAAAATTTTCACCGAAACCTCCTTCAAGCGATGGATCGTCATCAGGCTGATGGTAGAAGGCGAACTCGACGAACCGTAGTGAGAGATCAAGCCGAAGCTCCGAGTCCATCGACTGCAAATCCGAGCCAAACGTTGTCATTCGGGGTTGGCTCTGTCCTGAGTCTTCTTATTGTTGTTGGTCTATTTGTTTGA

Protein sequence

MASSLKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTENFHRNLLQAMDRHQADGRRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSLLIVVGLFV
Homology
BLAST of PI0017911 vs. ExPASy TrEMBL
Match: A0A0A0K7L9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394040 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 4.8e-30
Identity = 85/105 (80.95%), Postives = 89/105 (84.76%), Query Frame = 0

Query: 1   MASSLKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTE--NFHRNLLQAMDRHQADG 60
           MASSLKTLVSI+FI L ILLSQT  TSSA++H  A DSLTE   FHRNLLQAMDRHQADG
Sbjct: 1   MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG 60

Query: 61  RRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSLLIVVGLFV 104
           RRRTRRTVVRDQA+APSPSTAN SQTLS G GSVL L IVV LFV
Sbjct: 61  RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV 105

BLAST of PI0017911 vs. ExPASy TrEMBL
Match: A0A6J1GRX2 (uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC111456466 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.4e-07
Identity = 55/112 (49.11%), Postives = 67/112 (59.82%), Query Frame = 0

Query: 5   LKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTENFHRNLLQAMDRHQA--DG---- 64
           +K+L+SI  + LL LLS+ LP S+A  HG A   L   F R+ LQ  +RHQ   +G    
Sbjct: 93  IKSLISIALLALL-LLSEHLPISAA-DHGVAPSPLARVFRRDTLQTAERHQVAENGIGYQ 152

Query: 65  -------RRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSLLIVVGLFV 104
                  RRR RR V R  AE PSPS+AN SQT SFGVGS+L L  V GLF+
Sbjct: 153 YSFEQKIRRRARRAVRR--AEGPSPSSANWSQTSSFGVGSLLCLCTVFGLFL 200

BLAST of PI0017911 vs. ExPASy TrEMBL
Match: A0A6J1JZB1 (uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488793 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 5.4e-05
Identity = 52/112 (46.43%), Postives = 65/112 (58.04%), Query Frame = 0

Query: 5   LKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTENFHRNLLQAMDRHQA--DG---- 64
           +K+L+SI  + LL LL + LP S+A  HG A   L   F  + LQ  +RHQ   +G    
Sbjct: 66  IKSLISIALLALL-LLFERLPISAA-DHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQ 125

Query: 65  -------RRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSLLIVVGLFV 104
                  RRR RR V R  AE PSPS+AN S+T SFGVGS+L L  V GLF+
Sbjct: 126 YSFEQKIRRRARRAVRR--AEGPSPSSANWSRTSSFGVGSLLCLCTVFGLFL 173

BLAST of PI0017911 vs. NCBI nr
Match: KGN44884.1 (hypothetical protein Csa_015752 [Cucumis sativus])

HSP 1 Score: 140.2 bits (352), Expect = 1.0e-29
Identity = 85/105 (80.95%), Postives = 89/105 (84.76%), Query Frame = 0

Query: 1   MASSLKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTE--NFHRNLLQAMDRHQADG 60
           MASSLKTLVSI+FI L ILLSQT  TSSA++H  A DSLTE   FHRNLLQAMDRHQADG
Sbjct: 1   MASSLKTLVSIVFIALFILLSQTPSTSSAVLHTIAFDSLTEINYFHRNLLQAMDRHQADG 60

Query: 61  RRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSLLIVVGLFV 104
           RRRTRRTVVRDQA+APSPSTAN SQTLS G GSVL L IVV LFV
Sbjct: 61  RRRTRRTVVRDQAQAPSPSTANRSQTLSLGAGSVLGLFIVVALFV 105

BLAST of PI0017911 vs. NCBI nr
Match: XP_022954099.1 (uncharacterized protein LOC111456466 [Cucurbita moschata])

HSP 1 Score: 63.9 bits (154), Expect = 9.1e-07
Identity = 55/112 (49.11%), Postives = 67/112 (59.82%), Query Frame = 0

Query: 5   LKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTENFHRNLLQAMDRHQA--DG---- 64
           +K+L+SI  + LL LLS+ LP S+A  HG A   L   F R+ LQ  +RHQ   +G    
Sbjct: 93  IKSLISIALLALL-LLSEHLPISAA-DHGVAPSPLARVFRRDTLQTAERHQVAENGIGYQ 152

Query: 65  -------RRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSLLIVVGLFV 104
                  RRR RR V R  AE PSPS+AN SQT SFGVGS+L L  V GLF+
Sbjct: 153 YSFEQKIRRRARRAVRR--AEGPSPSSANWSQTSSFGVGSLLCLCTVFGLFL 200

BLAST of PI0017911 vs. NCBI nr
Match: XP_022992473.1 (uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima])

HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04
Identity = 52/112 (46.43%), Postives = 65/112 (58.04%), Query Frame = 0

Query: 5   LKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTENFHRNLLQAMDRHQA--DG---- 64
           +K+L+SI  + LL LL + LP S+A  HG A   L   F  + LQ  +RHQ   +G    
Sbjct: 66  IKSLISIALLALL-LLFERLPISAA-DHGVAPSPLAGVFRLDTLQTAERHQVAENGIGNQ 125

Query: 65  -------RRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSLLIVVGLFV 104
                  RRR RR V R  AE PSPS+AN S+T SFGVGS+L L  V GLF+
Sbjct: 126 YSFEQKIRRRARRAVRR--AEGPSPSSANWSRTSSFGVGSLLCLCTVFGLFL 173

BLAST of PI0017911 vs. NCBI nr
Match: KAG6575858.1 (hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 56.2 bits (134), Expect = 1.9e-04
Identity = 49/104 (47.12%), Postives = 62/104 (59.62%), Query Frame = 0

Query: 5   LKTLVSILFITLLILLSQTLPTSSAIVHGRASDSLTENFHRNLLQAMDRHQA--DG---- 64
           +K+L+SI  + LL LLS+ LP S+A  HG A   L   F R+ LQ  +RHQ   +G    
Sbjct: 4   IKSLISIALLALL-LLSEHLPISAA-DHGVAPSPLAGVFRRDTLQTAERHQVAENGIGYQ 63

Query: 65  -------RRRTRRTVVRDQAEAPSPSTANPSQTLSFGVGSVLSL 96
                  RRR RR V R  AE PSPS+AN S+T SFG+GS+L L
Sbjct: 64  YSFEQKIRRRARRAVRR--AEGPSPSSANWSRTSSFGIGSLLCL 103

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K7L94.8e-3080.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394040 PE=4 SV=1[more]
A0A6J1GRX24.4e-0749.11uncharacterized protein LOC111456466 OS=Cucurbita moschata OX=3662 GN=LOC1114564... [more]
A0A6J1JZB15.4e-0546.43uncharacterized protein LOC111488793 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
KGN44884.11.0e-2980.95hypothetical protein Csa_015752 [Cucumis sativus][more]
XP_022954099.19.1e-0749.11uncharacterized protein LOC111456466 [Cucurbita moschata][more]
XP_022992473.11.1e-0446.43uncharacterized protein LOC111488793 isoform X1 [Cucurbita maxima][more]
KAG6575858.11.9e-0447.12hypothetical protein SDJN03_26497, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017911.1PI0017911.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane