PI0017835 (gene) Melon (PI 482460) v1

Overview


Name	PI0017835
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	signal recognition particle 43 kDa protein, chloroplastic
Location	chr01: 4830824 .. 4832673 (-)
RNA-Seq Expression	PI0017835
Synteny	PI0017835

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTAACAAAATTTGTAACATGATGCTAATTTAAAGGTTGAACTAAAAGTGTTAAAAATTAGTGGAAACTAAGTTTTAATGGATGTAGAACTTAATTGAATCAGTGTTGGATACTTTCTGTCTTGTTTCCAACTTCCATTCACTTTATTTGTTGATTTTTTGGTTAAAAGAAGTGTCTAAACTAAATCCAATTCAAAGTTAAGAGCTGTGAAATAAACCAAAAAACCAACACACTAACAAAATATTGAAAATTTCTCTAACTAAAATGACAGCCATGGATTCCATCCATTTCCTTATCCATAATTTCCTCTTATCTCAGATTTTCCATACCCCACCTTCTCAAAACGATACCGTTTCTCCCTCTCCAATCCCTTCTTCCACTCCCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCACAACCACATCCGCACCTTCCTCCATGGACGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTATCCCGATCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTACCCATTTCACCGCTTATGCGGTTCAAAGCGATCAACCCATCACGCAACAAACCCGCAAACCAGAAGACGATGAATCCTACGGCGAAGTCGATGGCATCATCGGCAGCCGTGCTTTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTAGCCGAGTACGAAACTCCTTGGTGGACCGCCGCTAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACTGCTCTTCTGTTTGTTTCTGGACTTGGGTCTGTGGAATGTGTGAGAACATTGGCGGAAGCCGGTGCGAATCTTAACCACCGTGATAACAGTGGTGGGTTTACGGCTTTGCATATGGCGGCTGGGTATGTGAAACCAGAGACAGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGAAGATGAGAAGGGACGGACGGCGTTGGAGTTAGCTAAGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATCGGAGCGGTGGAGAAGGTGGTTTATGAGTATGCGGAGGTGGAGGAATTGTTGGAAAAGAGAGGGAAAGGGGAGAATTTGGAGTATTTAGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCAGATTTTGAAGCAGGGTTGGAATATGCAGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTTTGGATAATGTGGATCCTGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGACAAAGCCTTTTTCCCCCTCCAAGTATGTATTTAAACTAGAGATTTTTTTTTTGTAATATTGGAAAAATCTTAAAAAATAATAAAAAAAAAAAAAAAAGAGATTGATATATATACTCTCTTTTGAACGTGTCCTTTTACTATTGGATTGCAGGTGGATTTGTTTGGATAATTTCGATTAAATTTTTTTTTTTTTAAAAAAAGTAAAATATTATCATTTTGAATGAATTATTATTGAGATTTAAAGTGCAGTATCTTAACTAGTTAAAATATACTCAAATAGATGTTAAAACATTTTATTTACTAAATTA

mRNA sequence

ATTTTAACAAAATTTGTAACATGATGCTAATTTAAAGGTTGAACTAAAAGTGTTAAAAATTAGTGGAAACTAAGTTTTAATGGATGTAGAACTTAATTGAATCAGTGTTGGATACTTTCTGTCTTGTTTCCAACTTCCATTCACTTTATTTGTTGATTTTTTGGTTAAAAGAAGTGTCTAAACTAAATCCAATTCAAAGTTAAGAGCTGTGAAATAAACCAAAAAACCAACACACTAACAAAATATTGAAAATTTCTCTAACTAAAATGACAGCCATGGATTCCATCCATTTCCTTATCCATAATTTCCTCTTATCTCAGATTTTCCATACCCCACCTTCTCAAAACGATACCGTTTCTCCCTCTCCAATCCCTTCTTCCACTCCCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTTCACAACCACATCCGCACCTTCCTCCATGGACGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTATCCCGATCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTACCCATTTCACCGCTTATGCGGTTCAAAGCGATCAACCCATCACGCAACAAACCCGCAAACCAGAAGACGATGAATCCTACGGCGAAGTCGATGGCATCATCGGCAGCCGTGCTTTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTAGCCGAGTACGAAACTCCTTGGTGGACCGCCGCTAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACTGCTCTTCTGTTTGTTTCTGGACTTGGGTCTGTGGAATGTGTGAGAACATTGGCGGAAGCCGGTGCGAATCTTAACCACCGTGATAACAGTGGTGGGTTTACGGCTTTGCATATGGCGGCTGGGTATGTGAAACCAGAGACAGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGAAGATGAGAAGGGACGGACGGCGTTGGAGTTAGCTAAGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATCGGAGCGGTGGAGAAGGTGGTTTATGAGTATGCGGAGGTGGAGGAATTGTTGGAAAAGAGAGGGAAAGGGGAGAATTTGGAGTATTTAGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCAGATTTTGAAGCAGGGTTGGAATATGCAGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTTTGGATAATGTGGATCCTGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGACAAAGCCTTTTTCCCCCTCCAAGTATGTATTTAAACTAGAGATTTTTTTTTTGTAATATTGGAAAAATCTTAAAAAATAATAAAAAAAAAAAAAAAAGAGATTGATATATATACTCTCTTTTGAACGTGTCCTTTTACTATTGGATTGCAGGTGGATTTGTTTGGATAATTTCGATTAAATTTTTTTTTTTTTAAAAAAAGTAAAATATTATCATTTTGAATGAATTATTATTGAGATTTAAAGTGCAGTATCTTAACTAGTTAAAATATACTCAAATAGATGTTAAAACATTTTATTTACTAAATTA

Coding sequence (CDS)

ATGGACGCCGTCTTCCTCAATCAATCTCTCTCTCGCCTTAAACTTCCCCCTAAAACCCCTCTCCCTATCCCGATCCCTTTCCCCTCTCCAATCCCCCATCTCAATCTCCGCCGCAACTTTACCCATTTCACCGCTTATGCGGTTCAAAGCGATCAACCCATCACGCAACAAACCCGCAAACCAGAAGACGATGAATCCTACGGCGAAGTCGATGGCATCATCGGCAGCCGTGCTTTGCCCGACGCTACTGGAATGGAGTATCTAATTAAATGGAAAGATGGGCATTCCCCTTCATGGGTTCCTTCCGATTTCATCGCTAAAGATGTTGTAGCCGAGTACGAAACTCCTTGGTGGACCGCCGCTAAGAAAGCCGATGAATCCGCTCTCAAATCGCTTATAGATTCTGGTGATGAACGCGATTTCGATGCGGTGGATGAAGATGGGAGAACTGCTCTTCTGTTTGTTTCTGGACTTGGGTCTGTGGAATGTGTGAGAACATTGGCGGAAGCCGGTGCGAATCTTAACCACCGTGATAACAGTGGTGGGTTTACGGCTTTGCATATGGCGGCTGGGTATGTGAAACCAGAGACAGTGGAGTTGTTGGTGGAATTGGGGGCGGATCCGGAGATTGAAGATGAGAAGGGACGGACGGCGTTGGAGTTAGCTAAGGAGATATTGAAAGCGACGCCGAGGGTTCAGTTTATGAGGAGATTGGGGTTGGAGAAGGTGATCGGAGCGGTGGAGAAGGTGGTTTATGAGTATGCGGAGGTGGAGGAATTGTTGGAAAAGAGAGGGAAAGGGGAGAATTTGGAGTATTTAGTGAAATGGAAAGATGGAGAGGATAATGAGTGGGTGAAAGTGGGGTTGATTGCGGAGGATTTGGTGGCAGATTTTGAAGCAGGGTTGGAATATGCAGTGGCGGAGGCGGTGGTCGGAAAAAGAGTTGGGGATGATGGGAAGATGGAGTATCTTGTTAAATGGACGGATATACAAGATGCCACGTGGGAGCCTTTGGATAATGTGGATCCTGATTTGATTAACGAGTTTGAGAAGGCCCAGGCCCAATCCAGTAATGGTAGTGCCCTTTGA

Protein sequence

MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRKPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSNGSAL

Homology

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BLAST of PI0017835 vs. ExPASy Swiss-Prot
Match: O22265 (Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=2)

HSP 1 Score: 412.5 bits (1059), Expect = 4.8e-114
Identity = 224/362 (61.88%), Postives = 274/362 (75.69%), Query Frame = 0


Query: 3   AVFLNQSLSRLKL-PPKTPLPIPIPF-PSPIPHLNLRRNFTHFTAYAVQSDQPITQQT-- 62
           A+ ++QSLSR+KL PPK+       F P  +P   +   F      AVQ +   T  +  
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  RKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 122
              EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGHSPSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEG-AMEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLN 182
           PWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR LAEAGA+L+
Sbjct: 132 PWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPR---V 242
           HRD  GG TALHMAAGYV+PE VE LVELGAD E+EDE+G TALELA+EILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE 302
           QF RR+GLEKVI  +E  V+EYAEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEK 354
           D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

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BLAST of PI0017835 vs. ExPASy Swiss-Prot
Match: Q8LSQ2 (Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0131900 PE=2 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 1.9e-94
Identity = 195/384 (50.78%), Postives = 254/384 (66.15%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLP----PKTP-LPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQ--P 60
           M+AV  + SLSRLK P     +TP L I +PF   +P+  L       TA AV  DQ  P
Sbjct: 1   MEAVLRHPSLSRLKPPNPNAQRTPALSITVPFRLRLPNRRL-------TAAAVFQDQTNP 60

Query: 61  ITQQTRKPEDDESYGEVDGIIGSRALPD-----------ATGMEYLIKWKDGHSPSWVPS 120
               ++  +DDE+YGEVD I+ SR + +            T  EYL++WKDGH PSW+P+
Sbjct: 61  RNPASKGGDDDEAYGEVDRIVSSRTIKNPVFAEDGSATTVTATEYLVEWKDGHEPSWIPA 120

Query: 121 DFIAKDVVAEYETPWWTAAKKADESALKSLI-DSGDERDFDAVDEDGRTALLFVSGLGSV 180
           + IA DVVAEYETPWWTAAKKAD + + +L+ D    RD DA D  GRTA+ F +GLGS 
Sbjct: 121 EAIAADVVAEYETPWWTAAKKADAAEITALLADETLRRDPDAEDAQGRTAMHFAAGLGSE 180

Query: 181 ECVRTLAEAGANLNHRDNS-GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALE 240
           ECVR LAEAGA++   + + GG T LH+A GY +P  V  L+ELGA+PE  D +GRT LE
Sbjct: 181 ECVRALAEAGADVGRPERAGGGLTPLHIAVGYGRPAAVRALLELGAEPEAPDGQGRTPLE 240

Query: 241 LAKEILKATPR---VQFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWK 300
           L +++L  TP+     F RRL LE     +EK VYE+ EVE++++ RG+G+  EYLV+W+
Sbjct: 241 LVQDVLAKTPKGNPATFERRLALEAAAKELEKAVYEWGEVEKVVDGRGEGKWREYLVEWR 300

Query: 301 DGEDNEWVKVGLIAEDLVADFEAGLEYAVAEAVVGKR--VGDDGKMEYLVKWTDIQDATW 360
           DG D EWV+   +AEDLV DF+AGLEYAVAEAVV KR     +GK EYLVKW DI++ATW
Sbjct: 301 DGGDREWVRAAWVAEDLVKDFDAGLEYAVAEAVVNKREAAEGEGKWEYLVKWVDIEEATW 360

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BLAST of PI0017835 vs. ExPASy Swiss-Prot
Match: V6CLA2 (E3 ubiquitin-protein ligase hecd-1 OS=Caenorhabditis elegans OX=6239 GN=hecd-1 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.3e-10
Identity = 42/127 (33.07%), Postives = 73/127 (57.48%), Query Frame = 0


Query: 98  SWVPSDFIAKDVVAEYETPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSG 157
           S V  D+ A             A ++ D +AL   I+SG + D +  D+ G++   + S 
Sbjct: 326 SVVSGDYAAGSGAERVHRQLIDAIRQKDLTALVDAIESG-QVDVNFADDVGQSLTNWASA 385

Query: 158 LGSVECVRTLAEAGANLNHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRT 217
            GS+E V+ L + G+++N    S   ++LH AA + +P+ V+LL++ GA+P++ DE G+T
Sbjct: 386 FGSIEMVQYLCDKGSDVNKGHKS---SSLHYAACFGRPDVVKLLLQRGANPDLRDEDGKT 445

Query: 218 ALELAKE 225
           AL+ A+E
Sbjct: 446 ALDKARE 448

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BLAST of PI0017835 vs. ExPASy Swiss-Prot
Match: Q9SAR5 (Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana OX=3702 GN=AKR2A PE=1 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 2.2e-10
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAK-----EILKATPRVQFM 236
              T LH AAGY + E V LL+E GA   +++   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

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BLAST of PI0017835 vs. ExPASy Swiss-Prot
Match: Q9VL06 (E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 8.5e-10
Identity = 38/105 (36.19%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 122 KKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNSG 181
           +  D  AL+  I+SG   D + +D+ G+T L + S  G++E V  L E GA++N    S 
Sbjct: 398 RSKDSEALREAIESGG-IDVNCMDDVGQTLLNWASAFGTLEMVEYLCEKGADVNKGQRS- 457

Query: 182 GFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEIL 227
             ++LH AA + +P   ++L++ GA P++ DE G+T L+ A+E L
Sbjct: 458 --SSLHYAACFGRPAIAKILLKFGAYPDLRDEDGKTPLDKARERL 498

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BLAST of PI0017835 vs. ExPASy TrEMBL
Match: A0A1S3BHX6 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103490246 PE=4 SV=1)

HSP 1 Score: 693.0 bits (1787), Expect = 6.8e-196
Identity = 344/356 (96.63%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           M+AVFLNQSLSRLKLPPK PLP+PIPFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT K
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           AKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LAEAG NLNHRDNS
Sbjct: 121 AKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVAD+EA
Sbjct: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS 357
           GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+
Sbjct: 301 GLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQA 356

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BLAST of PI0017835 vs. ExPASy TrEMBL
Match: A0A0A0K634 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 9.8e-195
Identity = 345/358 (96.37%), Postives = 350/358 (97.77%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           M+AVFLNQSLSRLKLPPKTPL    PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT+K
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LA+AG NLNHRDNS
Sbjct: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           EKVI AVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Sbjct: 241 EKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN 359
           GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
Sbjct: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN 354

[Close]

BLAST of PI0017835 vs. ExPASy TrEMBL
Match: A0A6J1EP65 (signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111435281 PE=4 SV=1)

HSP 1 Score: 589.0 bits (1517), Expect = 1.4e-164
Identity = 302/375 (80.53%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           MDAVF+NQSLSRLKLPPK PLP     PSPI HL+LRR F  FTAYAV  ++P+TQQT++
Sbjct: 57  MDAVFVNQSLSRLKLPPKPPLP---KLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQ 116

Query: 61  ----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 120
               PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP
Sbjct: 117 PDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 176

Query: 121 WWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNH 180
           WWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+R LAEAGA+L+H
Sbjct: 177 WWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDH 236

Query: 181 RDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMR 240
           RD SGGFTALHMAAGYVKP TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF R
Sbjct: 237 RDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFAR 296

Query: 241 RLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA 300
           RLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLVA
Sbjct: 297 RLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA 356

Query: 301 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ--- 360
           DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q   
Sbjct: 357 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQKSV 416

[Close]

BLAST of PI0017835 vs. ExPASy TrEMBL
Match: A0A6J1JM92 (signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486468 PE=4 SV=1)

HSP 1 Score: 584.3 bits (1505), Expect = 3.4e-163
Identity = 301/375 (80.27%), Postives = 327/375 (87.20%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           MDAVF+NQSLS LKLPPK PLP     PSPI HL+LRR F  FTAYAV  ++P+TQQT++
Sbjct: 50  MDAVFVNQSLSSLKLPPKPPLP---KLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQ 109

Query: 61  ----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 120
               PEDDESYGEVDGIIGSR+L DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP
Sbjct: 110 PDNFPEDDESYGEVDGIIGSRSLADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 169

Query: 121 WWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNH 180
           WWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  CVR LAEAGA+L+H
Sbjct: 170 WWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCVRILAEAGADLDH 229

Query: 181 RDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMR 240
           RD SGGFTALHMAAGYVKP TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF R
Sbjct: 230 RDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFAR 289

Query: 241 RLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA 300
           RLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLVA
Sbjct: 290 RLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA 349

Query: 301 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ--- 360
           DFEAGLEYAVAEAVVGKR+GDDGKMEYLVKWTDI+DATWEP  NVD DLI EFE  Q   
Sbjct: 350 DFEAGLEYAVAEAVVGKRLGDDGKMEYLVKWTDIEDATWEPEGNVDSDLIAEFETGQKSV 409

[Close]

BLAST of PI0017835 vs. ExPASy TrEMBL
Match: A0A6J1C248 (signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007575 PE=4 SV=1)

HSP 1 Score: 565.5 bits (1456), Expect = 1.6e-157
Identity = 286/365 (78.36%), Postives = 319/365 (87.40%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTR- 60
           MDA+FLNQS+SRLK+ PK+  P+P  +PS IP+ NL+     F+A AVQ+DQ + QQ+  
Sbjct: 1   MDALFLNQSISRLKISPKSS-PLPPLYPSRIPNRNLK-----FSACAVQNDQRLAQQSNA 60

Query: 61  -----KPEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYE 120
                K  +DE+YGEVDGIIGSRAL D +GMEYLI WKDGH+PSWVPSDFIA+DVVAEYE
Sbjct: 61  AISAGKFNEDETYGEVDGIIGSRALQDGSGMEYLIAWKDGHAPSWVPSDFIARDVVAEYE 120

Query: 121 TPWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANL 180
           TPWWTAAKKADESALKSLID+ D RD DAVDEDGRTALLFV+GLGS  CVR LAE GAN+
Sbjct: 121 TPWWTAAKKADESALKSLIDAADGRDLDAVDEDGRTALLFVAGLGSEACVRMLAEGGANV 180

Query: 181 NHRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQF 240
           +HRDNSGGFTALHMAAGYVKP  VE L++LGA PE+EDEKGRTALELA+EILKATPR+QF
Sbjct: 181 DHRDNSGGFTALHMAAGYVKPGAVEQLLDLGAYPEVEDEKGRTALELAREILKATPRIQF 240

Query: 241 MRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDL 300
            RR+GLE+V+GA+EK V+EYAEVE LLEKRGKGENLEYLVKWKDGEDNEWVK GLIA DL
Sbjct: 241 GRRMGLERVVGALEKAVFEYAEVEALLEKRGKGENLEYLVKWKDGEDNEWVKAGLIAADL 300

Query: 301 VADFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQA 360
           VADFEAGLEYAVAEAV GKR+GDDGKMEYLVKWTDI+DATWEPLDNVDPDLI EFE AQA
Sbjct: 301 VADFEAGLEYAVAEAVAGKRMGDDGKMEYLVKWTDIEDATWEPLDNVDPDLIKEFEDAQA 359

[Close]

BLAST of PI0017835 vs. NCBI nr
Match: XP_008447899.1 (PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis melo])

HSP 1 Score: 693.0 bits (1787), Expect = 1.4e-195
Identity = 344/356 (96.63%), Postives = 351/356 (98.60%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           M+AVFLNQSLSRLKLPPK PLP+PIPFPS IPHLNLRRNFTHFTAYAVQSDQPITQQT K
Sbjct: 1   MEAVFLNQSLSRLKLPPKPPLPLPIPFPSTIPHLNLRRNFTHFTAYAVQSDQPITQQTYK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           AKKAD+SAL+SLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LAEAG NLNHRDNS
Sbjct: 121 AKKADKSALESLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILAEAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVAD+EA
Sbjct: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQS 357
           GLEYAVAEAVVGKRVGD+GKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQ+
Sbjct: 301 GLEYAVAEAVVGKRVGDEGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQA 356

[Close]

BLAST of PI0017835 vs. NCBI nr
Match: XP_004153574.1 (signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus])

HSP 1 Score: 689.1 bits (1777), Expect = 2.0e-194
Identity = 345/358 (96.37%), Postives = 350/358 (97.77%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           M+AVFLNQSLSRLKLPPKTPL    PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT+K
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LA+AG NLNHRDNS
Sbjct: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           EKVI AVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Sbjct: 241 EKVIRAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN 359
           GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
Sbjct: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN 354

[Close]

BLAST of PI0017835 vs. NCBI nr
Match: KAE8645681.1 (hypothetical protein Csa_020568 [Cucumis sativus])

HSP 1 Score: 654.4 bits (1687), Expect = 5.6e-184
Identity = 331/358 (92.46%), Postives = 336/358 (93.85%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           M+AVFLNQSLSRLKLPPKTPL    PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQT+K
Sbjct: 1   MEAVFLNQSLSRLKLPPKTPL----PFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTQK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
           PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVR LA+AG NLNHRDNS
Sbjct: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRILADAGVNLNHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALHMAAGYVKPETVELLVELGADPEI+DEKGRTALELAKEILKATPRVQFMRRLGL
Sbjct: 181 GGFTALHMAAGYVKPETVELLVELGADPEIDDEKGRTALELAKEILKATPRVQFMRRLGL 240

Query: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           EKVI AV              EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLV D+EA
Sbjct: 241 EKVIRAV--------------EKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVGDYEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN 359
           GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN
Sbjct: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQAQSSN 340

[Close]

BLAST of PI0017835 vs. NCBI nr
Match: XP_038888741.1 (signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida])

HSP 1 Score: 646.0 bits (1665), Expect = 2.0e-181
Identity = 330/374 (88.24%), Postives = 339/374 (90.64%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           MDAVF+NQSLSRLKL PK PLP P    S  PHLNLRRNF HFT YAVQSDQP+TQQT+K
Sbjct: 1   MDAVFVNQSLSRLKLSPKPPLPFPPSSSSRNPHLNLRRNFKHFTPYAVQSDQPLTQQTQK 60

Query: 61  PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120
            EDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA
Sbjct: 61  SEDDESYGEVDGIIGSRALSDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETPWWTA 120

Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           AKKADESALKSLID+GD RDFDAVDEDGRTALLFV+GLGS  CVR LAEAG NL+HRDNS
Sbjct: 121 AKKADESALKSLIDAGDGRDFDAVDEDGRTALLFVAGLGSNPCVRMLAEAGVNLDHRDNS 180

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMRRLGL 240
           GGFTALH+AAGYVKPETVELLVELGADPEIEDEKGRT L LAKEILKATPRVQFMRR+GL
Sbjct: 181 GGFTALHLAAGYVKPETVELLVELGADPEIEDEKGRTPLVLAKEILKATPRVQFMRRIGL 240

Query: 241 EKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300
           E+VIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA
Sbjct: 241 ERVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVADFEA 300

Query: 301 GLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKA-------- 360
           GLEYAVAEAVVGKR GDDGKMEYLVKWTDIQDATWEP DNVDPDLI EFEKA        
Sbjct: 301 GLEYAVAEAVVGKRFGDDGKMEYLVKWTDIQDATWEPQDNVDPDLIAEFEKAQAQPQAQP 360

Query: 361 ----QAQSSNGSAL 363
               QAQSSNGSAL
Sbjct: 361 QAQSQAQSSNGSAL 374

[Close]

BLAST of PI0017835 vs. NCBI nr
Match: KAG6589032.1 (Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 589.0 bits (1517), Expect = 2.9e-164
Identity = 302/375 (80.53%), Postives = 328/375 (87.47%), Query Frame = 0


Query: 1   MDAVFLNQSLSRLKLPPKTPLPIPIPFPSPIPHLNLRRNFTHFTAYAVQSDQPITQQTRK 60
           MDAVF+NQSLSRLKLPPK PLP     PSPI HL+LRR F  FTAYAV  ++P+TQQT++
Sbjct: 1   MDAVFVNQSLSRLKLPPKPPLP---KLPSPILHLHLRRTFKSFTAYAV--NEPLTQQTQQ 60

Query: 61  ----PEDDESYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 120
               PEDDESYGEVDGIIGSRAL DATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP
Sbjct: 61  PDNFPEDDESYGEVDGIIGSRALADATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYETP 120

Query: 121 WWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNH 180
           WWTAAKKADESALKSLID+ D RDF+AVDEDGRTALLFV+GLGS  C+R LAEAGA+L+H
Sbjct: 121 WWTAAKKADESALKSLIDAADSRDFNAVDEDGRTALLFVAGLGSEPCIRILAEAGADLDH 180

Query: 181 RDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPRVQFMR 240
           RD SGGFTALHMAAGYVKP TVELL+ELGADPE++D+KGRT L LA+EI+KATPRVQF R
Sbjct: 181 RDKSGGFTALHMAAGYVKPGTVELLLELGADPEVQDDKGRTPLVLAREIVKATPRVQFAR 240

Query: 241 RLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAEDLVA 300
           RLGLE+VIGA+E+VV+E+AEVEELLEKRGKGENLEYLVKWKDGEDNEWVK  LIAEDLVA
Sbjct: 241 RLGLERVIGALERVVFEFAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKAALIAEDLVA 300

Query: 301 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIQDATWEPLDNVDPDLINEFEKAQ--- 360
           DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDI+DATWEP  NVD DL+ EFE  Q   
Sbjct: 301 DFEAGLEYAVAEAVVGKRVGDDGKMEYLVKWTDIEDATWEPEGNVDSDLVTEFETGQKSV 360

[Close]

BLAST of PI0017835 vs. TAIR 10
Match: AT2G47450.1 (chloroplast signal recognition particle component (CAO) )

HSP 1 Score: 412.5 bits (1059), Expect = 3.4e-115
Identity = 224/362 (61.88%), Postives = 274/362 (75.69%), Query Frame = 0


Query: 3   AVFLNQSLSRLKL-PPKTPLPIPIPF-PSPIPHLNLRRNFTHFTAYAVQSDQPITQQT-- 62
           A+ ++QSLSR+KL PPK+       F P  +P   +   F      AVQ +   T  +  
Sbjct: 12  ALVIHQSLSRIKLSPPKSSSSSSSAFSPESLPIRRIELCFRGAICAAVQRNYEETTSSVE 71

Query: 63  RKPEDDE---SYGEVDGIIGSRALPDATGMEYLIKWKDGHSPSWVPSDFIAKDVVAEYET 122
              EDDE   SYGEV+ IIGSR   +   MEYLI+WKDGHSPSWVPS +IA DVV+EYET
Sbjct: 72  EAEEDDESSSSYGEVNKIIGSRTAGEG-AMEYLIEWKDGHSPSWVPSSYIAADVVSEYET 131

Query: 123 PWWTAAKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLN 182
           PWWTAA+KADE AL  L+   ++RD DAVDE+GRTALLFV+GLGS +CVR LAEAGA+L+
Sbjct: 132 PWWTAARKADEQALSQLL---EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLD 191

Query: 183 HRDNSGGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAKEILKATPR---V 242
           HRD  GG TALHMAAGYV+PE VE LVELGAD E+EDE+G TALELA+EILK TP+   +
Sbjct: 192 HRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPM 251

Query: 243 QFMRRLGLEKVIGAVEKVVYEYAEVEELLEKRGKGENLEYLVKWKDGEDNEWVKVGLIAE 302
           QF RR+GLEKVI  +E  V+EYAEV+E++EKRGKG+++EYLV+WKDG D EWVK   +AE
Sbjct: 252 QFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGKGKDVEYLVRWKDGGDCEWVKGVHVAE 311

Query: 303 DLVADFEAGLEYAVAEAVVGKRVGDDGK-MEYLVKWTDIQDATWEPLDNVDPDLINEFEK 354
           D+  D+E GLEYAVAE+V+GKRVGDDGK +EYLVKWTD+ DATWEP DNVD  L+  +++
Sbjct: 312 DVAKDYEDGLEYAVAESVIGKRVGDDGKTIEYLVKWTDMSDATWEPQDNVDSTLVLLYQQ 369

[Close]

BLAST of PI0017835 vs. TAIR 10
Match: AT4G35450.3 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAK-----EILKATPRVQFM 236
              T LH AAGY + E V LL+E GA   +++   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

[Close]

BLAST of PI0017835 vs. TAIR 10
Match: AT4G35450.4 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +
Sbjct: 188 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 247

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAK-----EILKATPRVQFM 236
              T LH AAGY + E V LL+E GA   +++   +T +++AK     E++K   +  F+
Sbjct: 248 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 304

[Close]

BLAST of PI0017835 vs. TAIR 10
Match: AT4G35450.2 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAK-----EILKATPRVQFM 236
              T LH AAGY + E V LL+E GA   +++   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

[Close]

BLAST of PI0017835 vs. TAIR 10
Match: AT4G35450.1 (ankyrin repeat-containing protein 2 )

HSP 1 Score: 68.2 bits (165), Expect = 1.6e-11
Identity = 43/120 (35.83%), Postives = 68/120 (56.67%), Query Frame = 0


Query: 121 AKKADESALKSLIDSGDERDFDAVDEDGRTALLFVSGLGSVECVRTLAEAGANLNHRDNS 180
           A   D   LK+ + SG  +D +  D +GRTAL F  G G ++C + L +AGA++N  D +
Sbjct: 226 ASLGDVEGLKAALASGGNKDEE--DSEGRTALHFACGYGELKCAQVLIDAGASVNAVDKN 285

Query: 181 GGFTALHMAAGYVKPETVELLVELGADPEIEDEKGRTALELAK-----EILKATPRVQFM 236
              T LH AAGY + E V LL+E GA   +++   +T +++AK     E++K   +  F+
Sbjct: 286 KN-TPLHYAAGYGRKECVSLLLENGAAVTLQNLDEKTPIDVAKLNSQLEVVKLLEKDAFL 342

The following BLAST results are available for this feature:

BLAST of PI0017835 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22265	4.8e-114	61.88	Signal recognition particle 43 kDa protein, chloroplastic OS=Arabidopsis thalian...	[more]
Q8LSQ2	1.9e-94	50.78	Probable signal recognition particle 43 kDa protein, chloroplastic OS=Oryza sati...	[more]
V6CLA2	1.3e-10	33.07	E3 ubiquitin-protein ligase hecd-1 OS=Caenorhabditis elegans OX=6239 GN=hecd-1 P...	[more]
Q9SAR5	2.2e-10	35.83	Ankyrin repeat domain-containing protein 2A OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9VL06	8.5e-10	36.19	E3 ubiquitin-protein ligase Ufd4 OS=Drosophila melanogaster OX=7227 GN=Ufd4 PE=2...	[more]

BLAST of PI0017835 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BHX6	6.8e-196	96.63	signal recognition particle 43 kDa protein, chloroplastic OS=Cucumis melo OX=365...	[more]
A0A0A0K634	9.8e-195	96.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G018780 PE=4 SV=1	[more]
A0A6J1EP65	1.4e-164	80.53	signal recognition particle 43 kDa protein, chloroplastic-like OS=Cucurbita mosc...	[more]
A0A6J1JM92	3.4e-163	80.27	signal recognition particle 43 kDa protein, chloroplastic OS=Cucurbita maxima OX...	[more]
A0A6J1C248	1.6e-157	78.36	signal recognition particle 43 kDa protein, chloroplastic OS=Momordica charantia...	[more]

BLAST of PI0017835 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447899.1	1.4e-195	96.63	PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Cucumis me...	[more]
XP_004153574.1	2.0e-194	96.37	signal recognition particle 43 kDa protein, chloroplastic [Cucumis sativus]	[more]
KAE8645681.1	5.6e-184	92.46	hypothetical protein Csa_020568 [Cucumis sativus]	[more]
XP_038888741.1	2.0e-181	88.24	signal recognition particle 43 kDa protein, chloroplastic [Benincasa hispida]	[more]
KAG6589032.1	2.9e-164	80.53	Signal recognition particle 43 kDa protein, chloroplastic, partial [Cucurbita ar...	[more]

BLAST of PI0017835 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47450.1	3.4e-115	61.88	chloroplast signal recognition particle component (CAO)	[more]
AT4G35450.3	1.6e-11	35.83	ankyrin repeat-containing protein 2	[more]
AT4G35450.4	1.6e-11	35.83	ankyrin repeat-containing protein 2	[more]
AT4G35450.2	1.6e-11	35.83	ankyrin repeat-containing protein 2	[more]
AT4G35450.1	1.6e-11	35.83	ankyrin repeat-containing protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000953	Chromo/chromo shadow domain	SMART	SM00298	chromo_7	coord: 66..118 e-value: 2.7E-4 score: 30.3 coord: 304..354 e-value: 3.4E-7 score: 39.9 coord: 253..303 e-value: 1.4E-7 score: 41.1
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 305..361 score: 11.127601
IPR000953	Chromo/chromo shadow domain	PROSITE	PS50013	CHROMO_2	coord: 255..284 score: 8.865101
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 147..176 e-value: 0.91 score: 18.6 coord: 181..210 e-value: 4.6E-4 score: 29.5 coord: 112..143 e-value: 240.0 score: 9.6
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 147..179 score: 10.95327
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 181..213 score: 11.99496
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 307..351 e-value: 9.4E-8 score: 31.9
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 112..250 e-value: 2.6E-37 score: 129.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 113..224
None	No IPR available	GENE3D	2.40.50.40		coord: 65..111 e-value: 2.2E-15 score: 57.9 coord: 251..300 e-value: 1.5E-17 score: 64.9
None	No IPR available	GENE3D	2.40.50.40		coord: 301..353 e-value: 1.4E-25 score: 90.6
None	No IPR available	PANTHER	PTHR24128	HOMEOBOX PROTEIN WARIAI	coord: 1..356
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 181..213 score: 10.630358
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 147..179 score: 9.595634
None	No IPR available	CDD	cd00024	CD_CSD	coord: 304..351 e-value: 2.26382E-10 score: 53.6349
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 120..212 e-value: 2.8E-11 score: 43.9
IPR030300	Signal recognition particle 43kDa protein	PANTHER	PTHR24128:SF43	SIGNAL RECOGNITION PARTICLE 43 KDA PROTEIN, CHLOROPLASTIC	coord: 1..356
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 303..351
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 253..300
IPR016197	Chromo-like domain superfamily	SUPERFAMILY	54160	Chromo domain-like	coord: 63..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017835.1	PI0017835.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0070208	protein heterotrimerization
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0009644	response to high light intensity
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0080085	signal recognition particle, chloroplast targeting
molecular_function	GO:0097718	disordered domain specific binding
molecular_function	GO:0042802	identical protein binding
molecular_function	GO:0030674	protein-macromolecule adaptor activity
molecular_function	GO:0005515	protein binding