PI0017803 (gene) Melon (PI 482460) v1

Overview


Name	PI0017803
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr01: 8656487 .. 8656912 (-)
RNA-Seq Expression	PI0017803
Synteny	PI0017803

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGTTCGAACACATTTTGGCTAACCAAGGGGATCAGACGGTGCAACTCCACAATTTGCAAACTCGAGTTGACCAGTTGCAGCGTCCCAACGCCGAAAATCTTGTAACGCCCGCATCTCAAGAAGACATCAATATCTTGGGAAGCGAAATGAGAGACCTTTCGGTGAACAACGCCCAGATCTCCACCGCGGTCTCCAACCTCTTCACTTACGTCTCCCACCTCACTTCCTTGGTCTTGGCCCAATCAGAAATGATGCGACAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGAAATACACGTATGCAACAATTGTGCAACGTGTGCCTGCCCCAATCATACCGCCAGATCTAGAAGCACCCTTCCCACCACTCACGCGTCCTGGCGATCCTGCTCCCAGCCAAGACAACTAA

mRNA sequence

ATGGAGCAGTTCGAACACATTTTGGCTAACCAAGGGGATCAGACGGTGCAACTCCACAATTTGCAAACTCGAGTTGACCAGTTGCAGCGTCCCAACGCCGAAAATCTTGTAACGCCCGCATCTCAAGAAGACATCAATATCTTGGGAAGCGAAATGAGAGACCTTTCGGTGAACAACGCCCAGATCTCCACCGCGGTCTCCAACCTCTTCACTTACGTCTCCCACCTCACTTCCTTGGTCTTGGCCCAATCAGAAATGATGCGACAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGAAATACACGTATGCAACAATTGTGCAACGTGTGCCTGCCCCAATCATACCGCCAGATCTAGAAGCACCCTTCCCACCACTCACGCGTCCTGGCGATCCTGCTCCCAGCCAAGACAACTAA

Coding sequence (CDS)

ATGGAGCAGTTCGAACACATTTTGGCTAACCAAGGGGATCAGACGGTGCAACTCCACAATTTGCAAACTCGAGTTGACCAGTTGCAGCGTCCCAACGCCGAAAATCTTGTAACGCCCGCATCTCAAGAAGACATCAATATCTTGGGAAGCGAAATGAGAGACCTTTCGGTGAACAACGCCCAGATCTCCACCGCGGTCTCCAACCTCTTCACTTACGTCTCCCACCTCACTTCCTTGGTCTTGGCCCAATCAGAAATGATGCGACAAATAGCTGCGCGGCATGATAGGCAGTTTCGCACACAGATGAAATACACGTATGCAACAATTGTGCAACGTGTGCCTGCCCCAATCATACCGCCAGATCTAGAAGCACCCTTCCCACCACTCACGCGTCCTGGCGATCCTGCTCCCAGCCAAGACAACTAA

Protein sequence

MEQFEHILANQGDQTVQLHNLQTRVDQLQRPNAENLVTPASQEDINILGSEMRDLSVNNAQISTAVSNLFTYVSHLTSLVLAQSEMMRQIAARHDRQFRTQMKYTYATIVQRVPAPIIPPDLEAPFPPLTRPGDPAPSQDN

Homology

[Close]

BLAST of PI0017803 vs. ExPASy TrEMBL
Match: A0A5D3CT45 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001110 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.9e-05
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 85  EMMRQIAARHDRQFRTQMKYTYATIVQRVPAPIIPPDLEAPFPPLTR-PGDPAPSQDN 142
           EM  ++  R DR+F+  M+YT+A  VQRVP P+IP +LE PFPP+ + PG P P Q++
Sbjct: 144 EMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 201

[Close]

BLAST of PI0017803 vs. ExPASy TrEMBL
Match: A0A5A7UH00 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G001880 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.6e-05
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 93  RHDRQFRTQMKYTYATIVQRVPAPIIPPDLEAPFPPLTR-PGDPAPSQDN 142
           R DR+F+  M+YT+A  VQRVP P+IP +LE PFPP+ + PG P P Q++
Sbjct: 98  RRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 147

[Close]

BLAST of PI0017803 vs. ExPASy TrEMBL
Match: A0A5D3DYE2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2030G00280 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.7e-04
Identity = 41/143 (28.67%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 2   EQFEHILANQGDQTVQLHNLQTRVDQLQRPNAENLVTPASQEDINILGSEMRDLSVNNAQ 61
           + FE +L  Q   +++   + T ++++Q  N++       Q+       ++  +  N  Q
Sbjct: 203 DYFEQVLYEQTINSMKHDAMTTLMEKVQVENSKLKQLLTEQQ------KQVAKIMANQDQ 262

Query: 62  ISTAVSNLFTYVSHLTSLVLAQSEMMRQIAARHDRQFRTQMKYTYATIVQRVPAPIIPPD 121
           +S+ VSN       LT +V+   EM  ++  + D+QF+  ++YT+A   QR+P+P I P+
Sbjct: 263 LSSTVSN-------LTCVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPE 322

Query: 122 LEAPFPPLTRP---GDPAPSQDN 142
           +E+ + PL +P   G P P QDN
Sbjct: 323 IESLY-PLIQPVNLGYPDPHQDN 331

[Close]

BLAST of PI0017803 vs. ExPASy TrEMBL
Match: A0A5A7VF20 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold548G00430 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.7e-04
Identity = 41/143 (28.67%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 2   EQFEHILANQGDQTVQLHNLQTRVDQLQRPNAENLVTPASQEDINILGSEMRDLSVNNAQ 61
           + FE +L  Q   +++   + T ++++Q  N++       Q+       ++  +  N  Q
Sbjct: 283 DYFEQVLYEQTINSMKHDAMTTLMEKVQVENSKLKQLLTEQQ------KQVAKIMANQDQ 342

Query: 62  ISTAVSNLFTYVSHLTSLVLAQSEMMRQIAARHDRQFRTQMKYTYATIVQRVPAPIIPPD 121
           +S+ VSN       LT +V+   EM  ++  + D+QF+  ++YT+A   QR+P+P I P+
Sbjct: 343 LSSTVSN-------LTCVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPE 402

Query: 122 LEAPFPPLTRP---GDPAPSQDN 142
           +E+ + PL +P   G P P QDN
Sbjct: 403 IESLY-PLIQPVNLGYPDPHQDN 411

[Close]

BLAST of PI0017803 vs. NCBI nr
Match: TYK14602.1 (hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 4.0e-05
Identity = 29/58 (50.00%), Postives = 41/58 (70.69%), Query Frame = 0


Query: 85  EMMRQIAARHDRQFRTQMKYTYATIVQRVPAPIIPPDLEAPFPPLTR-PGDPAPSQDN 142
           EM  ++  R DR+F+  M+YT+A  VQRVP P+IP +LE PFPP+ + PG P P Q++
Sbjct: 144 EMQVKMGERRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 201

[Close]

BLAST of PI0017803 vs. NCBI nr
Match: KAA0054434.1 (hypothetical protein E6C27_scaffold24G001880 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 2.0e-04
Identity = 27/50 (54.00%), Postives = 37/50 (74.00%), Query Frame = 0


Query: 93  RHDRQFRTQMKYTYATIVQRVPAPIIPPDLEAPFPPLTR-PGDPAPSQDN 142
           R DR+F+  M+YT+A  VQRVP P+IP +LE PFPP+ + PG P P Q++
Sbjct: 98  RRDRKFQASMEYTHAIFVQRVPQPVIPQELETPFPPIHQAPGTPKPRQED 147

[Close]

BLAST of PI0017803 vs. NCBI nr
Match: KAA0064129.1 (uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 7.6e-04
Identity = 41/143 (28.67%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 2   EQFEHILANQGDQTVQLHNLQTRVDQLQRPNAENLVTPASQEDINILGSEMRDLSVNNAQ 61
           + FE +L  Q   +++   + T ++++Q  N++       Q+       ++  +  N  Q
Sbjct: 283 DYFEQVLYEQTINSMKHDAMTTLMEKVQVENSKLKQLLTEQQ------KQVAKIMANQDQ 342

Query: 62  ISTAVSNLFTYVSHLTSLVLAQSEMMRQIAARHDRQFRTQMKYTYATIVQRVPAPIIPPD 121
           +S+ VSN       LT +V+   EM  ++  + D+QF+  ++YT+A   QR+P+P I P+
Sbjct: 343 LSSTVSN-------LTCVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPE 402

Query: 122 LEAPFPPLTRP---GDPAPSQDN 142
           +E+ + PL +P   G P P QDN
Sbjct: 403 IESLY-PLIQPVNLGYPDPHQDN 411

[Close]

BLAST of PI0017803 vs. NCBI nr
Match: TYK28611.1 (hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 54.7 bits (130), Expect = 7.6e-04
Identity = 41/143 (28.67%), Postives = 76/143 (53.15%), Query Frame = 0


Query: 2   EQFEHILANQGDQTVQLHNLQTRVDQLQRPNAENLVTPASQEDINILGSEMRDLSVNNAQ 61
           + FE +L  Q   +++   + T ++++Q  N++       Q+       ++  +  N  Q
Sbjct: 203 DYFEQVLYEQTINSMKHDAMTTLMEKVQVENSKLKQLLTEQQ------KQVAKIMANQDQ 262

Query: 62  ISTAVSNLFTYVSHLTSLVLAQSEMMRQIAARHDRQFRTQMKYTYATIVQRVPAPIIPPD 121
           +S+ VSN       LT +V+   EM  ++  + D+QF+  ++YT+A   QR+P+P I P+
Sbjct: 263 LSSTVSN-------LTCVVIMNFEMTWKMGVQRDKQFKASIEYTHAVFAQRMPSPFISPE 322

Query: 122 LEAPFPPLTRP---GDPAPSQDN 142
           +E+ + PL +P   G P P QDN
Sbjct: 323 IESLY-PLIQPVNLGYPDPHQDN 331

The following BLAST results are available for this feature:

BLAST of PI0017803 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017803 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CT45	1.9e-05	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7UH00	9.6e-05	54.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3DYE2	3.7e-04	28.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7VF20	3.7e-04	28.67	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of PI0017803 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK14602.1	4.0e-05	50.00	hypothetical protein E5676_scaffold552G001110 [Cucumis melo var. makuwa]	[more]
KAA0054434.1	2.0e-04	54.00	hypothetical protein E6C27_scaffold24G001880 [Cucumis melo var. makuwa]	[more]
KAA0064129.1	7.6e-04	28.67	uncharacterized protein E6C27_scaffold548G00430 [Cucumis melo var. makuwa]	[more]
TYK28611.1	7.6e-04	28.67	hypothetical protein E5676_scaffold2030G00280 [Cucumis melo var. makuwa]	[more]

BLAST of PI0017803 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 121..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017803.1	PI0017803.1	mRNA