PI0017795 (gene) Melon (PI 482460) v1

Overview
NamePI0017795
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionRibosome biogenesis protein
Locationchr08: 1758822 .. 1762373 (+)
RNA-Seq ExpressionPI0017795
SyntenyPI0017795
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAAACCAGTCTCCCGGTAAGGCTGTATGCTTTGAGATATCTTCTCTTATGTGTAGCTTCTTATTTTGATTTCATCAATCCTAAGTTTTCTTGTCCGTTGTCCATGAAGGTCGGATGCAAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGTGAGTTTGGATTTCTGACATTAACTTGATGGTGTTTGTTCCATAAGCTGCTTCACCGTCTTTGTTTCAGAAAATTTTTCATTTTTTGACTCTTTCTGATTTGAAATAACTTGAGCTTCTCTTTTAAAGAAACATTGTTTAAATACAGAAGTATAGATTAACAAATGACAAAACATATTGATAGCATCCTGCTAATGGGATGCAAATTGCAAAAGATGCAGACCAAAATTGGCCACCTAGTGCAGGTTATCAAACGAATACAAGCCTAATTTTACTTCAGTTGTCAGTTTTCATCCTAAAACTTGTTTAGTACTTTTGCAAAACAAATACCAATATGTTTTCAGTTGATTTTTAATTTCCGAACAAATGGAAGGTCACCTTTAAGAATTGCAAATCAAGTTATATTTCAATACCATTTTGTTGTTTAGGATTTTCAGTTTAACTCTTGGGATGTATATTTACATTTTTGAGCATTGTTTGTGTTATCATAAACAATTAAATGTTAAATCTGACTACATGCAGGAGTTGGAGAAACTATTGCTACCTTGAATGCTCAAAAGACTATTACTAAGGTAAAATTATTCATTCTATTACTTTGCGGCTCTATATTTCTTCACTAGTTAAGGCCATTCAATTTTCTTATTATTTCTTTTCATTTTTGTCATTGGTGGCTTTTAATACTCTTCCATTTTTGTTATGTGAATAGTTCTCGAACAATCTTTTGTTTCTCCTTGTTATCTTTTAAACTGGCTGTAGCTATAATTTTCTTGAAATTTTCAATGTACGGCATACGTTGATAAGCACAATCAACCTCATGTATCCGTTATAGTTGGTGCCATCTAATAATAACTTGTGTCAAAGTTAAGCCAAGTTTTTTTTTTATATGACCAAACGTTGGAAGGTTATAAATTAATCATGGAACCACATGAGCGCCGATGCGAGCCCCCTCAACTTTATGCTCTTTACATAATATATATAGATAAAACCAATATAATACTAAAAATTGTAGTTAGCCTAGTGGTAAATGTCACACCTCGCCCCAAATTGCCTTCTTCACCTCGCGACAACTTGGGACGTGGTGCGACTCTGGACTATTCAAATATCTCAAAAGAAACATCTGAATCGCCCAATCTTAACTTAAACTTTGGAAACTTAAAAGCAACAGATAGCCTTAACGCTTAACAAAGAACAACCAACTTTATTAAAAACTTCAAACAATTCTGATTACAACAACTTAAAACCAAAAATACAAACTTAGTACAACACTAGCTCTTAATGCCTAACTACAACTTTAAGTAGTTCTTATTGCCTCGCCTTGCGATTCAACTTCACTTCAAAACGCCTAGCCTTCTTTAGCCAGCCACTTCGCCAGACCTTACCTTTAATAAAACTTTATCTCGCAAAGCCTGCTTGCCTGAAGAAAAATAAACTTAAAGAATAAGCCTAATGCTTAGTGAGTGTTTGCGTTTAAAACCTTTGATCAAACATCAGACATGAAAACATTTTCTCTTTAAACATTTCATATCGCCTCAACAGGATAAAACATAAACACACATTAACCTTTATTCATTTCTTTCGCTGGATCTTTTAGGACCTCAACGCCATAGTGTGGATTGGACTCTAACAAAAACTAACACTATGCGGAACATTGTCCCTTTCTCAGTTGCCTAGCGGTAAGCCTAAATATGGACAATTCCCACATATTTAGTTACCATTCTCACCATGCGGACAATCTCAATGCCATGTCTTTACTGTTATGTGCACATAATAGCTAGCTTATGGTTTGAATCGAATAAAAGTAATGGTTTGAATCGCATACATCATTACATTAAATCATTTCCTTTGCATTTCATTTTCTTTCTCTTTCAAATCCTTACAATCAAACATATAATAACATTCATTAAGACAGAAAGTAAAGGAAAGAATAAGGAAGACATCTTTCTTTTTTGAAAATACACTCACAAAGATTAGCTTAATCTTTTCCTTTTTAACTTTTTTCTCTTCTCGCCTAGTCCCAAACTCAGCAGAGTCTCGTCTTTTTAATTTTAGCAACACTTAACAAATGAGTCCTTAAGTTCTATTTATACTATTCCTAAACTGGATTAGTCTTCATAATCTCAACGCTTAATTTGCCACCTCAAAAGTAGCTTCACGCGTCAGAATTCCTTTCCACTTCAGCTTACGAACTGACACATCGCCCTTTCCGATTTGGGATTCTCCACTAATTTAGCTAAAACCAAAATCTGAGCACTCTTTAGTTTTATCTCGCCTAAAACAGCTCAAACCTCCTTTACAGTCATCTCACGAAATAGAACTTTCTTATTTCGCGGAATGATCAAAACTCAAACTTTCACTTAAGTCTCTTTTCTTCTTCTTCTCGCGTAAACACTTAAAATACTAAATAACTTTTTCCTTATAAATAAACTTCAACACTTTAAAACACCTTGAGAACGCAGGGACGGGTCTCACAGTAAATGCATGCATAAATCCTAGGTTCAGATCTCATGCATTTATTTTTAATTTTTCCTTCATTGATATAAATCCCTCTGTCAATAAAATTTATGGATCCGCCAATTCACATAAACACTACAAGGGTTTATTGGTATACCCTGAAATTTTCATCCTCTACTATGATAAATTTGTCGTGGAGTGCTTCAATCTTTCTACTTTACTTTTAAATTTTAACATTTGAAAAATAATCGTTTTAGTTACTAAATAATAGGAAGTGATTGTCAATACCGAGGAACTTAGGAGTTGGCTGTAGTTAGAATAGGAGCATTTTGATTTGGTATTTTGATCGGTTCAGTGTTCTAATTCCTTGTATAAAGTATCCCCCACCCAAACCCAAAAAAAAAAAAGAAGAAAAAGGAGAGAATAATTGGTGCATTTTTTGTCACCATGCTTTCATTTTGCTCTTTTAGTATTGTGCTAAAGTTGAATATATGTAACAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGACTTTCTTCCTGGATTGGAGGCGCCAAAACAAAAACCTTCCGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAGTTCATGTAGGTTGCTTGTTAGGATTATTTGAAATGTTTTACAATTCATCCTTATTTATGCATTATTGTACTGATGGTTCATTTTATCAGATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCAGACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCACTCGAGGAGCTGAAGAAAAAGAAGAATAAAAATGGGAGCAAGAAAAGAAAAGAGAAGAAGTCGAAAGCCTTGGCAAGACCTTCATCTATGGAGATGTGA

mRNA sequence

ATGGGCAAACCAGTCTCCCGGTCGGATGCAAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTGCTACCTTGAATGCTCAAAAGACTATTACTAAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGACTTTCTTCCTGGATTGGAGGCGCCAAAACAAAAACCTTCCGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAGTTCATATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCAGACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCACTCGAGGAGCTGAAGAAAAAGAAGAATAAAAATGGGAGCAAGAAAAGAAAAGAGAAGAAGTCGAAAGCCTTGGCAAGACCTTCATCTATGGAGATGTGA

Coding sequence (CDS)

ATGGGCAAACCAGTCTCCCGGTCGGATGCAAAATCTAAAGCTGAACGCAAATTTGAGAAGAAGGTCCAGTTTTATGAGAGAGTTGGAGAAACTATTGCTACCTTGAATGCTCAAAAGACTATTACTAAGAAGAAAAACCATCGAAGACGTAAAAGAGACTTGAAGGCTTTTGATCTTTCTACACTTTCAGACTTTCTTCCTGGATTGGAGGCGCCAAAACAAAAACCTTCCGCAGCCGAGTTAAAACTAAATTGCAAGTCTAGGCTAAAGTTCATATTGAAGGAGAGAAAGCAAATGGGTACTGTTCTTAATCACCCTGTGTTTCAGGCAGACCCATTGAGAGCTGTTCAGCTACATTTAGAGGGCACACAACCACTCGAGGAGCTGAAGAAAAAGAAGAATAAAAATGGGAGCAAGAAAAGAAAAGAGAAGAAGTCGAAAGCCTTGGCAAGACCTTCATCTATGGAGATGTGA

Protein sequence

MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLSTLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQPLEELKKKKNKNGSKKRKEKKSKALARPSSMEM
Homology
[Close]
BLAST of PI0017795 vs. ExPASy TrEMBL
Match: A0A0A0L113 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G442590 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 4.3e-70
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSD KSKAERKFEKKVQFYERVGETI TLNAQK+ITKKKNHRRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TLS+FLPGLEA KQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPLEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           EGTQP+EE KKKK NKNGSKKRKEKKSKA A+PSSMEM
Sbjct: 121 EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM 158

[Close]
BLAST of PI0017795 vs. ExPASy TrEMBL
Match: A0A5D3BQL6 (Putative ribosome biogenesis protein slx9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold808G00780 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69
Identity = 148/158 (93.67%), Postives = 151/158 (95.57%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSD KSKAERKFEKKVQFYERVGE+IATLNAQK+ITKKKNHRRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGESIATLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TLS+FLPGLEA KQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPLEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           EGTQP EE KKKK NKNGSKKRKEKK KA ARPSSMEM
Sbjct: 121 EGTQPTEEPKKKKMNKNGSKKRKEKKLKASARPSSMEM 158

[Close]
BLAST of PI0017795 vs. ExPASy TrEMBL
Match: A0A5A7V4K7 (Putative ribosome biogenesis protein slx9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G001080 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.6e-67
Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 6   SRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLSTLSDF 65
           ++SD KSKAERKFEKKVQFYERVGE+IATLNAQK+ITKKKNHRRRKRDLKAFDLSTLS+F
Sbjct: 214 NQSDVKSKAERKFEKKVQFYERVGESIATLNAQKSITKKKNHRRRKRDLKAFDLSTLSEF 273

Query: 66  LPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQP 125
           LPGLEA KQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQP
Sbjct: 274 LPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQP 333

Query: 126 LEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           +EE KKKK NKNGSKKRKEKKSKALARPSSMEM
Sbjct: 334 IEEPKKKKINKNGSKKRKEKKSKALARPSSMEM 366

[Close]
BLAST of PI0017795 vs. ExPASy TrEMBL
Match: A0A6J1E5M8 (putative ribosome biogenesis protein slx9-like OS=Cucurbita moschata OX=3662 GN=LOC111430153 PE=4 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.8e-60
Identity = 131/158 (82.91%), Postives = 143/158 (90.51%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKP SRSD+KSKAERKFEKK+QFYERVGETIATLNAQKTITKKK  RRRKRDLKAFDL+
Sbjct: 1   MGKPTSRSDSKSKAERKFEKKIQFYERVGETIATLNAQKTITKKK-LRRRKRDLKAFDLT 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
            LS+FLPGL+APKQK S  ELK+NCKSRLKF+LKE KQMGTVLNHP FQADPL A+ LHL
Sbjct: 61  ALSEFLPGLKAPKQKTSDTELKVNCKSRLKFVLKETKQMGTVLNHPAFQADPLGAIHLHL 120

Query: 121 EGTQPLEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           + TQP+EE KKKK N+NGSKKRKEKKSKA A+PSSMEM
Sbjct: 121 QSTQPVEETKKKKTNRNGSKKRKEKKSKATAKPSSMEM 157

[Close]
BLAST of PI0017795 vs. ExPASy TrEMBL
Match: A0A6J1JDX4 (putative ribosome biogenesis protein slx9-like OS=Cucurbita maxima OX=3661 GN=LOC111484925 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.4e-60
Identity = 131/158 (82.91%), Postives = 142/158 (89.87%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKP SRSD+KSKAERKFEKK+QFYERVGETIATLNAQKTITKKK  RRRKRDLKAFDL+
Sbjct: 1   MGKPTSRSDSKSKAERKFEKKIQFYERVGETIATLNAQKTITKKK-LRRRKRDLKAFDLT 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
            LS+FLPGL+ PKQK S  ELK+NCKSRLKF+LKE KQMGTVLNHP FQADPL A+ LHL
Sbjct: 61  ALSEFLPGLKTPKQKTSDTELKVNCKSRLKFVLKETKQMGTVLNHPAFQADPLGAIHLHL 120

Query: 121 EGTQPLEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           E TQP+EE KKKK N+NGSKKRKEKKSKA A+PSSMEM
Sbjct: 121 ESTQPVEETKKKKTNRNGSKKRKEKKSKATAKPSSMEM 157

[Close]
BLAST of PI0017795 vs. NCBI nr
Match: XP_038900086.1 (putative ribosome biogenesis protein slx9-like [Benincasa hispida] >XP_038900087.1 putative ribosome biogenesis protein slx9-like [Benincasa hispida] >XP_038900088.1 putative ribosome biogenesis protein slx9-like [Benincasa hispida] >XP_038900089.1 putative ribosome biogenesis protein slx9-like [Benincasa hispida] >XP_038900091.1 putative ribosome biogenesis protein slx9-like [Benincasa hispida])

HSP 1 Score: 278.5 bits (711), Expect = 3.6e-71
Identity = 147/157 (93.63%), Postives = 153/157 (97.45%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSD+KSKAERKFEKKVQFYERVGETI+TLNAQKTITKKK+HRRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDSKSKAERKFEKKVQFYERVGETISTLNAQKTITKKKSHRRRKRDLKAFDLS 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TLS+FLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRA+QLHL
Sbjct: 61  TLSEFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAIQLHL 120

Query: 121 EGTQPLEELKKKKNKNGSKKRKEKKSKALARPSSMEM 158
           EGTQP+EE KKK NKNGSKKRKEKKSKA  RPSSMEM
Sbjct: 121 EGTQPIEEPKKKTNKNGSKKRKEKKSKASPRPSSMEM 157

[Close]
BLAST of PI0017795 vs. NCBI nr
Match: XP_004144346.1 (putative ribosome biogenesis protein slx9-like [Cucumis sativus] >KGN54744.1 hypothetical protein Csa_012867 [Cucumis sativus])

HSP 1 Score: 273.9 bits (699), Expect = 8.8e-70
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSD KSKAERKFEKKVQFYERVGETI TLNAQK+ITKKKNHRRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGETITTLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TLS+FLPGLEA KQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPLEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           EGTQP+EE KKKK NKNGSKKRKEKKSKA A+PSSMEM
Sbjct: 121 EGTQPIEEPKKKKMNKNGSKKRKEKKSKASAKPSSMEM 158

[Close]
BLAST of PI0017795 vs. NCBI nr
Match: KAA0037498.1 (putative ribosome biogenesis protein slx9-like [Cucumis melo var. makuwa] >TYK01973.1 putative ribosome biogenesis protein slx9-like [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 4.4e-69
Identity = 148/158 (93.67%), Postives = 151/158 (95.57%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSD KSKAERKFEKKVQFYERVGE+IATLNAQK+ITKKKNHRRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDVKSKAERKFEKKVQFYERVGESIATLNAQKSITKKKNHRRRKRDLKAFDLS 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
           TLS+FLPGLEA KQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL
Sbjct: 61  TLSEFLPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120

Query: 121 EGTQPLEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           EGTQP EE KKKK NKNGSKKRKEKK KA ARPSSMEM
Sbjct: 121 EGTQPTEEPKKKKMNKNGSKKRKEKKLKASARPSSMEM 158

[Close]
BLAST of PI0017795 vs. NCBI nr
Match: KAA0062508.1 (putative ribosome biogenesis protein slx9-like [Cucumis melo var. makuwa])

HSP 1 Score: 264.6 bits (675), Expect = 5.4e-67
Identity = 143/153 (93.46%), Postives = 149/153 (97.39%), Query Frame = 0 

Query: 6   SRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLSTLSDF 65
           ++SD KSKAERKFEKKVQFYERVGE+IATLNAQK+ITKKKNHRRRKRDLKAFDLSTLS+F
Sbjct: 214 NQSDVKSKAERKFEKKVQFYERVGESIATLNAQKSITKKKNHRRRKRDLKAFDLSTLSEF 273

Query: 66  LPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQP 125
           LPGLEA KQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQP
Sbjct: 274 LPGLEATKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHLEGTQP 333

Query: 126 LEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           +EE KKKK NKNGSKKRKEKKSKALARPSSMEM
Sbjct: 334 IEEPKKKKINKNGSKKRKEKKSKALARPSSMEM 366

[Close]
BLAST of PI0017795 vs. NCBI nr
Match: XP_038883686.1 (putative ribosome biogenesis protein slx9-like isoform X1 [Benincasa hispida] >XP_038883687.1 putative ribosome biogenesis protein slx9-like isoform X1 [Benincasa hispida] >XP_038883688.1 putative ribosome biogenesis protein slx9-like isoform X1 [Benincasa hispida])

HSP 1 Score: 256.5 bits (654), Expect = 1.5e-64
Identity = 140/158 (88.61%), Postives = 150/158 (94.94%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKPVSRSD+KSKAERKFEKKVQFYERVGETI+TLNAQKTI+KKK++RRRKRDLKAFDLS
Sbjct: 1   MGKPVSRSDSKSKAERKFEKKVQFYERVGETISTLNAQKTISKKKSYRRRKRDLKAFDLS 60

Query: 61  TLSDFLPGLEAPKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLHL 120
            LS+FLPGL APKQKPSAAE KLNCKSRLKF+LKERKQM TVLNHPVFQADPLRA++LHL
Sbjct: 61  ILSEFLPGL-APKQKPSAAESKLNCKSRLKFMLKERKQMSTVLNHPVFQADPLRAIRLHL 120

Query: 121 EGTQPLEELKKKK-NKNGSKKRKEKKSKALARPSSMEM 158
           EGTQP+EE KKKK NKNGSKKRKEKKS A ARPSSMEM
Sbjct: 121 EGTQPIEEPKKKKTNKNGSKKRKEKKSNASARPSSMEM 157

[Close]
BLAST of PI0017795 vs. TAIR 10
Match: AT2G01640.1 (unknown protein; Has 51 Blast hits to 51 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 41; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-30
Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKP   S+  +K+++KFEKK+QFY +V +T+ +L+ QK I KKK  R R++ LKA+DL+
Sbjct: 1   MGKPSKGSEVTTKSDKKFEKKLQFYTKVKDTVTSLSVQKEIGKKKKIRSRQKKLKAYDLT 60

Query: 61  TLSDFLPGLEA-PKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLH 120
            LS+FLP   A  K    A ELK+NCK R K +L E +++  VL+HP FQADP+ ++  H
Sbjct: 61  NLSEFLPEFNALQKSALPAPELKMNCKRRQKLVLTEGERLNKVLDHPAFQADPVGSIFQH 120

Query: 121 LEGTQP--LEELKKKKNKNGSKKRKEKKSK 148
           L   QP   E+ KKK N NGSKKR +KK K
Sbjct: 121 LLSQQPPVEEKPKKKTNTNGSKKRNKKKGK 150

[Close]
BLAST of PI0017795 vs. TAIR 10
Match: AT2G01640.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages. )

HSP 1 Score: 129.0 bits (323), Expect = 3.3e-30
Identity = 75/150 (50.00%), Postives = 102/150 (68.00%), Query Frame = 0 

Query: 1   MGKPVSRSDAKSKAERKFEKKVQFYERVGETIATLNAQKTITKKKNHRRRKRDLKAFDLS 60
           MGKP   S+  +K+++KFEKK+QFY +V +T+ +L+ QK I KKK  R R++ LKA+DL+
Sbjct: 1   MGKPSKGSEVTTKSDKKFEKKLQFYTKVKDTVTSLSVQKEIGKKKKIRSRQKKLKAYDLT 60

Query: 61  TLSDFLPGLEA-PKQKPSAAELKLNCKSRLKFILKERKQMGTVLNHPVFQADPLRAVQLH 120
            LS+FLP   A  K    A ELK+NCK R K +L E +++  VL+HP FQADP+ ++  H
Sbjct: 61  NLSEFLPEFNALQKSALPAPELKMNCKRRQKLVLTEGERLNKVLDHPAFQADPVGSIFQH 120

Query: 121 LEGTQP--LEELKKKKNKNGSKKRKEKKSK 148
           L   QP   E+ KKK N NGSKKR +KK K
Sbjct: 121 LLSQQPPVEEKPKKKTNTNGSKKRNKKKGK 150

The following BLAST results are available for this feature:
BLAST of PI0017795 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017795 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L1134.3e-7093.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G442590 PE=4 SV=1[more]
A0A5D3BQL62.1e-6993.67Putative ribosome biogenesis protein slx9-like OS=Cucumis melo var. makuwa OX=11... [more]
A0A5A7V4K72.6e-6793.46Putative ribosome biogenesis protein slx9-like OS=Cucumis melo var. makuwa OX=11... [more]
A0A6J1E5M81.8e-6082.91putative ribosome biogenesis protein slx9-like OS=Cucurbita moschata OX=3662 GN=... [more]
A0A6J1JDX42.4e-6082.91putative ribosome biogenesis protein slx9-like OS=Cucurbita maxima OX=3661 GN=LO... [more]
BLAST of PI0017795 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038900086.13.6e-7193.63putative ribosome biogenesis protein slx9-like [Benincasa hispida] >XP_038900087... [more]
XP_004144346.18.8e-7093.67putative ribosome biogenesis protein slx9-like [Cucumis sativus] >KGN54744.1 hyp... [more]
KAA0037498.14.4e-6993.67putative ribosome biogenesis protein slx9-like [Cucumis melo var. makuwa] >TYK01... [more]
KAA0062508.15.4e-6793.46putative ribosome biogenesis protein slx9-like [Cucumis melo var. makuwa][more]
XP_038883686.11.5e-6488.61putative ribosome biogenesis protein slx9-like isoform X1 [Benincasa hispida] >X... [more]
BLAST of PI0017795 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G01640.13.3e-3050.00unknown protein; Has 51 Blast hits to 51 proteins in 21 species: Archae - 0; Bac... [more]
AT2G01640.23.3e-3050.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028160Ribosome biogenesis protein Slx9-likePFAMPF15341SLX9coord: 10..122
e-value: 1.1E-9
score: 38.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..157
NoneNo IPR availablePANTHERPTHR31109PROTEIN FAM207Acoord: 7..132

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017795.1PI0017795.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
cellular_component GO:0030686 90S preribosome
cellular_component GO:0005730 nucleolus
cellular_component GO:0030688 preribosome, small subunit precursor