PI0017677 (gene) Melon (PI 482460) v1

Overview
NamePI0017677
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 26085449 .. 26086029 (-)
RNA-Seq ExpressionPI0017677
SyntenyPI0017677
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATGACTCATTCTCTCAGAAATGTAGCCGAGCAACTGGTCAAATCGATTTTGTACGACCTAGTGTTGGGAAGAAGAAAGAAAGATGCACAACCACCTGTATCAGGTTGAAAACTTGTTACCTTAGCAAGGATTTATGTGGGATCCTGAAACTTCTCTCTCCGTATTCATTTTTATGTTCTGCTCTGTGCCCTTATATTTCTTACGAAAACTTGTTACATGTACTTTGTTTTCTTATTTGGAGCAGACATGTATCAATCTTTTGTAACAGAGGATTCACCCGAATGCTCGGCCTCAAAACTTTGACATTTTGCTGCAGTGCTATCTACGATGAAGATCAAGAGGTCTGCTTTTGTATCATTTTGTTTTCATCTTTATTTACAAAGTATAAGCTTAATGTTACAACTTCAAAATGGTTTCATAAGGAAAGTTGTGGGTTATAGTCTGCAAGTTGGTCTTTCAATTTTAAGCCTTCATTATTGACTTTTAGAAATATGGAGACACTTTGTCCAATGCTGATGACAACAGGCACAGGGAAAGAAGAGAGCATATATATATATTATATATATATAAATTAA

mRNA sequence

ATGAAAATGACTCATTCTCTCAGAAATGTAGCCGAGCAACTGGTCAAATCGATTTTGTACGACCTAGTGTTGGGAAGAAGAAAGAAAGATGCACAACCACCTGTATCAGCAGACATGTATCAATCTTTTGTAACAGAGGATTCACCCGAATGCTCGCCTTCATTATTGACTTTTAGAAATATGGAGACACTTTGTCCAATGCTGATGACAACAGGCACAGGGAAAGAAGAGAGCATATATATATATTATATATATATAAATTAA

Coding sequence (CDS)

ATGAAAATGACTCATTCTCTCAGAAATGTAGCCGAGCAACTGGTCAAATCGATTTTGTACGACCTAGTGTTGGGAAGAAGAAAGAAAGATGCACAACCACCTGTATCAGCAGACATGTATCAATCTTTTGTAACAGAGGATTCACCCGAATGCTCGCCTTCATTATTGACTTTTAGAAATATGGAGACACTTTGTCCAATGCTGATGACAACAGGCACAGGGAAAGAAGAGAGCATATATATATATTATATATATATAAATTAA

Protein sequence

MKMTHSLRNVAEQLVKSILYDLVLGRRKKDAQPPVSADMYQSFVTEDSPECSPSLLTFRNMETLCPMLMTTGTGKEESIYIYYIYIN
Homology
[Close]
BLAST of PI0017677 vs. ExPASy TrEMBL
Match: A0A0A0K6J2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426540 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.4e-22
Identity = 64/92 (69.57%), Postives = 67/92 (72.83%), Query Frame = 0 

Query: 1  MKMTHSLRNVAEQLVKSILYDLVLGRRKK-DAQPPVSADMYQSFVTEDSPECSPSLLTF- 60
          MKMT  LRNVAEQL KSI  DL+LG RKK D QPPVSADMYQSFVTEDSPECS S L   
Sbjct: 1  MKMTPLLRNVAEQLAKSIWIDLMLGSRKKGDGQPPVSADMYQSFVTEDSPECSASKLRHF 60

Query: 61 ----------RNMETLCPMLMTTGTGKEESIY 81
                    RNMET+CPMLMTTGTGKE+  Y
Sbjct: 61 AAVLSTMKIKRNMETICPMLMTTGTGKEDHKY 92

[Close]
BLAST of PI0017677 vs. NCBI nr
Match: KGN45113.1 (hypothetical protein Csa_016805 [Cucumis sativus])

HSP 1 Score: 114.4 bits (285), Expect = 5.0e-22
Identity = 64/92 (69.57%), Postives = 67/92 (72.83%), Query Frame = 0 

Query: 1  MKMTHSLRNVAEQLVKSILYDLVLGRRKK-DAQPPVSADMYQSFVTEDSPECSPSLLTF- 60
          MKMT  LRNVAEQL KSI  DL+LG RKK D QPPVSADMYQSFVTEDSPECS S L   
Sbjct: 1  MKMTPLLRNVAEQLAKSIWIDLMLGSRKKGDGQPPVSADMYQSFVTEDSPECSASKLRHF 60

Query: 61 ----------RNMETLCPMLMTTGTGKEESIY 81
                    RNMET+CPMLMTTGTGKE+  Y
Sbjct: 61 AAVLSTMKIKRNMETICPMLMTTGTGKEDHKY 92

The following BLAST results are available for this feature:
BLAST of PI0017677 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017677 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6J22.4e-2269.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G426540 PE=4 SV=1[more]
BLAST of PI0017677 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN45113.15.0e-2269.57hypothetical protein Csa_016805 [Cucumis sativus][more]
BLAST of PI0017677 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017677.1PI0017677.1mRNA