PI0017676 (gene) Melon (PI 482460) v1

Overview


Name	PI0017676
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	E3 ubiquitin-protein ligase rnf8-A isoform X1
Location	chr06: 16844339 .. 16852949 (+)
RNA-Seq Expression	PI0017676
Synteny	PI0017676

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTTCGCGGCAAATTCTTGAGGGTTAGATGGAGGAAGAAGAGCACGAGGAAGACCATGGTCTCGCTAATACAATTCTTTCCTGCCCTAATACAATTCCCGGTGATTCTCTCTCATTTCATGCATCTGTTTCTTCACCCTTGCTTTTTCACCAAATTGCTAATGATGTTCTTTCTAGGGTTTGCGGGAGCTTTTATCCGCTCGATATTGATAATGTCCTGTTTCAGTCCATATAGTTTTGTAGGGTTTGAAAGTTTAGAAATTCTGTTTGGTTACTCTATTTGTTTCATCCGTTTGATTAGAAAATGAAGCTTCTTCTAGAAGCTTTCTATTTCTTAAGTTTCTAGCTGCAACATTGAACTGTGTTTGTGCCTATTTTGTTACTCCATACACTTCTTTTGATCTGGGATTTGGTGCTTTGATTTTTGTGATGTCTGTAGGCTGTCCAATTGAAGGTATGGAATCTGTGGTTGTGACTGTCAGTGGCTACCATGGCACAGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCTAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGGTGGGTTTTTTTATAAAAAATTTTATTAGTCCCCAATTCAGTCTGAAGTTTACCAATTGCTTTCCAATAAGACGAGTTTTGCAATTATGTATGTGTAAAACAGAACAAGTTTGGAGTTTTGGATGTGGATTTGATGAAACACTTTATGGAGTATAGTCTTGCAGTATTTATCTATTATGAGTCACTCATCTGCAATCTTAGGCTAAAAAACGATGTTATTTATTGTCCATTCTTATGGTGATTAGATTTGTTGGGAATTACAAGGGAGGAAATTTGATCTTGCCAAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGGTCCTTACATTCTCCAAAGGTTTTGGCAATTTTTACTTTTTCTAGATTACATTATAGTTTCTTGCATACATCATCAAGCAATAACATACTGTCGTGGGGCTTTTGTCCAATTACATTACAACTAGTACAAAGGCTTAGGAATAATATATCTATTTTGTGATCCAACAAAAGATTTCTATTTTCTAACCATCACGGCAAGGAAATATGGAAAATGTGCAATTAGGAACATTTAATAAACAAATAACAAAAATTGCATGAAAAATATTGAGGGCAAAAATCTTAGCTAGATTTCCAATCAACCCAAAGAAGTGCTGCTATTTTTATTCAATGCATATGTTCTGAGTTTTCTGACTTTTTGATGCAACTCTTTGCAGTCAAATCCGGAAAGTCCCTTCTGTTTCTTTTTTCTTTTTCTTTTTCTTTTCTTCCCTCGAAAATAAATTATAAAGTCCATCTTTTCATTTCTTGTGTACCTAATCCTGGCAAAACATATAATTTTCTTTTTCACAGTAAATGATAACTAGAATTTATAGATTGTATGACCTTATTGTCTTCAGATTATCTGTTCTTCCTTTTATATTCCTTTGCATTTGCTCTGTAAGTGTCTTTTCTTGAGCTTTCACTAAGGCTCCGTTACATATCAGTTAATTTCCACCATTGCTTTATGGCTATCCTGTAATTTTGTTTATTTTCTCTCTTTGAATTGTGGATTTTATTCCTTCCAGTGGGAAATCTGTAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGGGCTCCGTCTCGGCCAAAAAGTATAACTTGCTTTCCGAAAAGTTACATAATTATGGAAATGTTGATGATCAAAGTATTAAAAACATATGCTCTTTTGGTGATTCAATCTTGCCCCGCTCTTCTTTGCTGGATAAGGTGATTTGAGACATTCCTCTCTTAAGATATGTGCACAAACTTACGGTTTAAGAGGCGAGAAATAATCAATTAATTATTTTGTTGTAAGTTGTAACTTGTAATTCATATGTCAAGATTAAACTCTTCAGGGAAAATATTAAGAATCTGAATCCTTTAATCGATTTACATTTCCTTTCATGGTGAGAAATTCATTATTTTCTTCACATTCATGACTTCATCGGTTTTCTTGAGTCCAAGTTCAAGTGCCATTCATAAATTATTGATATTATTAATAATATTATTGTTATTTTTCTTATGAAAGAAACACCATTCATAGATCTTTGTACATGCTATGATTTGTTTGATATTTAAATGTCAGGGTTCTCTTTGTAATCTAACTTAGGTATGCTTTATAAGTTAGGTTATTAGTTAATTAGTATGGTTAATTTCATAGTATTTAAATCCGATGACTTAAGCCTATATCAAAAGAATGCTATAAGCATCGCTCACCTAGCATAAAGTATGAACTATTGATGGTCACAAGTTTGAATTCCCGCCCCACATGTTGAACTAAAAAAAAACCTACTTAGGAAGAGTAAGGCTTCCCCTTTTGTACAACTGTTTTTGATCATTAATAAAGTAACAGCCCTAGGGCTTTTCGACTCCACCACTGTTATCATAAGAGAAAAAAGTAGTCAATACATGACTAGAGTAGTGCTTATCACTAACCCTTTTAATGTCAATCCCAACTAGGATCTTTCCTCTGATTTTAGAAAAAGCGATGACACTGCTCATAAGCCAAAGGACAAATTGCGGAAGAGGATTTCTAAGCAAGAAGACCCATCAAGCTCAAGTAGCAGAAACCGTTTTGAGGAACCAACTTCTTCTGGTTTTTTTGCGATTGAGGTAAGATATATCATTCTTCTTTCCATCTTACATTTGGAATCTCATTCATTTTTGTCCACGTTGCTATACTTCATAGGACAAAGCCCACTTCTTTTGCAATTAAGGTCTTAATCTATGGTAATATAAATGGTTTAAATTTAATAAATATCTGTTCTAAATTACTAATGTGCGTAAGTAGTTTTCTTTAATTAAGTAATGTGATCTGGTTCTCCTATTCTAATTGTAGGTGGATGACATGATATCTTTGATTAATCCTTCAACAATTTAAATTTCTATTGTTATAAAATCCCAATAAATTGGTATGTTCTAATTTTGTTCTGAGGTCCACCTACTGACTTTACTGCTTAAAATGTTTTATGCAAATGTGATCTGGTTCTCCTATTCTAATTGTAGGTCGATGACATGATATCTTTGATTAATCCTTCAACAATTTAAATTTCTATTTTTATAAAATCCCAATAAATTGGTATGTTCTAATTTTGTTCTGAGGTCCACCTACTGACTTTACTGCTTAAAATGCTATGCAGATGTTTTAGGCTAACCAAAATTCACCTCCAACAAATGACAAAAAGTAAGAAAGGGCATGGGTTAGACAAAAAGTAAGAAAGGGCATGGTAGTAAAAGTGTTAGTAGGTTGATGAGCAGCGGTAATAATCACTTTTCACATGTCGATTAGTCGAGGTGCGCGTCAGCTGGCCCAGACACTCACGGATATAAAAAAAAGATATCACTTTTCAATGTCTTGGGCCTTAAAAAGATCGGATCTAGCAACTAGGATAAATATTATTTTGTCAGGAAACAGAAGAATTAAGGAACATAAGCATCTTCAAATAAGTGTCCAATCCAAGCTAGCTAAGCCCCTTGGTTGAGCTCTTGTAAGAGCTTTGGACATTGCATCATGATTCAATAGTTTCACACACCCTGTGGTTGAGAGCTCATCAATACTGTTTTTAGCCCAATTAGAGTCCAAATAGGCGTGACATTAAATTTTACTAGCAGGAAAATACAGATTGTAGGATAAAGACTCTTCAATTTTATAAAACATCTCTTCACAGAAGCCATATGACTAAGAGTAGGAATAGGATAGGGTATGTGTTGACAATTCGTAACAACTGTGGCAATAATATGGAGACGTGAGTCCGTGACGGGAGTAGAGTATTGAGATGGGCCACCGATACTTTCATTCTATGCATTTTAGAATCCTCTTAACTAAATGACTTGGGAGAATTAGTTGTAGAACTTTCAATGTGAAAAGGAGTTTGACATGATTTGTCTCAGATATAACAAAACAATGCAAGATGGTTAAGAGGAGGTATGCAGCGTGTGAGGAAAAGATTGTGAACCCTGAAATGAGTCTATACACTGACCGGTATAGCATTTATAACGTTTTGCCACAAACGTATATAAACTCAACACAATCATACTTTGAGTTTTCTCTACATGGTTACATTTAGAATTTAACATTTTGTATTGGTTCAAAATAAATTCTATCTTAAAATATCTGCTCTAGTGAACATTAGTGAGTGATTTCTTTAATGTATTAATGTGAGTTTCTTCTACATTCTGATTGTGGTGTGGGTTGATGACTTGATATGGTCTGATCTGATTAATCAATAATCATCCAAGAACTTGTCAATTCCTTTAACTTGTTGCTAGGCTTTGACTTAGGAATATTTTGCCTCAGCTAGGCAGAATTGGAAGCTCACTAATCCTGTCTTTTGAAATTTTGAGCTGCGGCTTGGTTTGGTTCTATTGCCAAAGAATGTCAAATTCCACGACTTAATTGTGGACAATACTGTTTTTAATGATTTGCTTCTTTGTAATTTTTCATTGAACCCTGAGATAATTTCAGATTCTGTTCAAAGGTGTAATTTTGACATTCTTTTGAGCTCATTTTATTTTTTCATTTATTAGAATGTCATATTATTTTACACGATATGTCATTTCTTGGGCAATTGATTTCCTTCATCATTCTGATGAAATCCTATTTCTCTGTCTTTCTTGGCATATCGCCACTTGAAAGAAAGAAGCATTTTACCCTGAACAAAAAATTCTTGTGTACTTGTGAACTTTCCCCCCTCTTCACTAAGAACTTTTGCCCTCATTTTGTTTGGATAGCGTGGTTGCTCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAGGAATCTACTGTTAAATCTTCAAGGAAACGACACCTGCTTGTAAGTAATAACTCTAGTGAAGATCATAGCGAGCCTGACATTTGGAATTTTGTCCCAAAGCGGTATCATTTGGGAACTCGTAATAGTCTTACAGTTCCATCTAGCCATTGGGATGCTGAAACAGATATTGAAGTGGTAAACATTGGAGGAACATCTGACCGCGAACAGTTGTGTGATGAAAGGGGACTAGCAAGTGACAGGTTTGAAGGCGTTGAAGCTTGTGAGAACCAATCTACTTCCACAGATACAAACTTACTAGTCGACAATGCACCAAGAGTGCTATCAATAACTTCAGAAGATGAATTGCACAATATGAATGATTTGCAAAAGAACATTGAGGATCCAGTTATAGAACTTGATGCAAGCTTACCCCCCACTTCAATGGAGTTATCGTGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTACCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGGTAAAAGTTTTATTCAATTTCTATTCATAGAGATTCAAGGATCCAATTAAACCTTATGATATTGTTTTTGCTTTTTGAGCTAAAACTACTATAAAAGATAGGACCTTGGGCAGTGAACTATTCAATTTATTCAGCATATGAGAGTTAGCTTTTCTGACTTCATTAACTAGGTTGCATTTTTTGCCTTGATGATTGGGACTAGAGAACTACTTATTTGAATTTTCCATCATATTCATAGTCTCTTAATGGTAGTTCCTTATATTTTGTAGTAATTGGATTATGTTTTGGACATGCTAGTTATGGTTGTGTACTAGTTCTTTCTTCGATACATCCGAAGTAAGAACTTCCACACAAATAACATTGAGAAACACTGTGTTGTCTCCACAAATTATTTGTATTTTTTCCCATTATCTCTCTGTACTGCTTATCCATTTTTGTTTTCTACTTCAAAGGTAAAATTAACTATCTAATTCAGCATGAAATGAAATGTGCTTTAGGGATGATAATATATTGCAGAAGTTCAGGGTGACGATTGCTCGAGCAGTGATGGGATTTGCATGAATGTTAAACACTGGATATTTTAACTGCTTGTCATATATGATTGTATTGGCATCTTGAACTATTAGGCAACATCACAGATCTGATTAAGAAAAATTAACCTGAAAATTGTGTCTCTATAATTGTCTATACAATTTGCTCTCTGTTCAAATTATGTGAACTCCAAATTTATTTATTTTTCTTCTAATCATTACTTGATGGAAAATCTAACATCACTTTCAAGAATTCATTGCCATCTCAAGTTGATTAAAATCCTCAAATCACAAGATTATTAACTAAACCAAATTATGCGGGCTCTAAATTTACTTATTTTCCTCTGGTGCCAACTATTACTTTGAAACGCTGAGGCTACTAATGATTTTTGTTCTGTGAACTTGTTGAGTGAGTTCTGTCATTCTGAATTGATTGATTTACTTAGTCATCCAAATGCTGTCAATGTTCTAACATGTACTACGAAGTTCAGAATCAGTTTCAAGGTCCTAATCTATTGGTCTCGTATCTTGTAGGCTTTGAGCAGAAAAATCTCAACGTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACCTCGGATCAGAAGATATACTCCCAAACCATTCCATATGGATCACCATTATTGGATATTTACCTTCTATCTGATGAAAGAACTCTTAACAACGTTGTTCAGGTCATATTATTTTCAATGCTCAGTGTCGTTACTTCGTGGTTTGTGTGTGTGTGTGTGTGGGGAAGCTGATGAAATGCTAGTACTCATTTTCAAGACTTTCATTTGGAGCTTTTCTCTTCTAATTCTCATTGTATCTCTCTGGTGAAATTTTTATTTACTTTGGTTAAAACGGCCCATCTGGACAGACAACTAATTCTCGATAGTTATAATTAACAGCCCTCTGTCGCAGCTGTTTGTAGTGCATGCCGTTGTCGGGAACCAGAGGACCTCCTCATGAGCTGCCATCTTTGTCAAATTCGACAGATTCATTCATATTGTCTGGACCCGCCATTGTTACCATGGACTTGTATTCACTGCAAGGATCTGCAGACACTCTACCATCGAAGCCATTAATTTGTCATCTTGAAATAAGGTAACTTGCCTCCACTTCTGATTATGTCATATTGTTCCGTATACTTTTCAAAATTCATCTGAGTTGGGTATTGGTGGATTTTGCTTTTGGGAAATTGGATTAAAGGGTAGCATTGTGATAGACCCTCGATCATTAGGAGGTGTCTGAGAAAAAAGAGAGGAAGGGAAATAAATGTAAATAATTGTCAAAGAGAAAACGGTTAGTTATGGAGTGAAAGAAGTTACTGTGGGCCCTATAGGAAGATAGTGTTAGTTAGAATTGGGCTATTTAGATTGCCTCTGGGGGAGTCTTTTAATTATCTTTTTGCATTCACTGAAGTGTAGCTCTGTGAGCATGTTGAAGGGAGGGAGCCTCGACTTCCTTGACATTTTGGCTTAAATAGTAAATAGATAATCCGAGTTCTATCACGCTGTTGTGAGCACAAACAAATAGCGAGCAACTTATCAAGATCCAATTTGCACCTTGTTCGCCTTATTTTTTTTTATATATAAGAAAGAACATTTTTGTTAATTACTTAGTCGTTTTTTGATTTCTTAAACCTTTTCTTTTGGTCCTCTGACATTTTTGCTTTCTTACTTCCATTAATTTCATACTTGGTTGTTGTCGTACATTTATTTTTCTCAAAGTAAATGAAAAATTGTGCCCACACTAATAAATAGATCCTACCTTTTCTATGATGTGATTCATTTATATATTTTTCTATTTTCATTGTATTTTTGGTCCCAACGGGGTGGCCCCGTCGGCAAAGGCACACTGTTTCTTGGTAATATCTTCTCAAAAGCCACATCTTTAAACCTTTGAGTGAGCTTAATTTAAAAAAACCTCTTAACGTTCTCAATTTGGACCTTGGGACAGGCGAAAGGTTCTCTAGGATTAGTGAAGATGGGTCCCAATACCAATGCCAATACGTAAGGGTATAAAAAAAACATTTTTTTGATGGACGAATATGGTGTACTAATATTTTGACAAACTTTACCATTATTTAAGTCAGTTTTATCTTATTTTTATTTGTTTTCAAATAAATAATTATCTACATCAGTACTTTTGTGTTTGGATAACATGTGAAACGAAAAGAAAGTTTCAACTAAAATTGAGGTGTTTTAAAATCCGAGTCTAAAATAGAAAGTAGATGAATAGAGTTTTTAAAAGAATTAAATAAAATAAGAAACACATAAAGTTATAAACACAAAATCACGTTCAAACCTAATAATGTAGTTAGGACTTTATTCTGAGAAGCATTGACTTAAAATTCATGTGCTGTGCACAAACATACAGCTACCATTCTCCTTGTATTAGAAGCCAAACACAGGCTGGGACTTATCAAAGAATCTACCTACCTAACTGCAGAATACCCCATTAGGAAGATAGTTTATAAAATCCTATGTTGAAGCTTTACAATGATTGATAGTGATTTTGTTTTAGGTGATTGCAAAGAGAAATTGAAGTTCGCTGAAGATTTTGAAAGCAAATAAAAGCCAATCTGCCTCCCACAAATCCTTCAATGCTAAGGTTGTG

mRNA sequence

ATTTTTCGCGGCAAATTCTTGAGGGTTAGATGGAGGAAGAAGAGCACGAGGAAGACCATGGTCTCGCTAATACAATTCTTTCCTGCCCTAATACAATTCCCGGCTGTCCAATTGAAGGTATGGAATCTGTGGTTGTGACTGTCAGTGGCTACCATGGCACAGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCTAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGATTTGTTGGGAATTACAAGGGAGGAAATTTGATCTTGCCAAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGGTCCTTACATTCTCCAAAGTGGGAAATCTGTAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGGGCTCCGTCTCGGCCAAAAAGTATAACTTGCTTTCCGAAAAGTTACATAATTATGGAAATGTTGATGATCAAAGTATTAAAAACATATGCTCTTTTGGTGATTCAATCTTGCCCCGCTCTTCTTTGCTGGATAAGGATCTTTCCTCTGATTTTAGAAAAAGCGATGACACTGCTCATAAGCCAAAGGACAAATTGCGGAAGAGGATTTCTAAGCAAGAAGACCCATCAAGCTCAAGTAGCAGAAACCGTTTTGAGGAACCAACTTCTTCTGGTTTTTTTGCGATTGAGCGTGGTTGCTCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAGGAATCTACTGTTAAATCTTCAAGGAAACGACACCTGCTTGTAAGTAATAACTCTAGTGAAGATCATAGCGAGCCTGACATTTGGAATTTTGTCCCAAAGCGGTATCATTTGGGAACTCGTAATAGTCTTACAGTTCCATCTAGCCATTGGGATGCTGAAACAGATATTGAAGTGGTAAACATTGGAGGAACATCTGACCGCGAACAGTTGTGTGATGAAAGGGGACTAGCAAGTGACAGGTTTGAAGGCGTTGAAGCTTGTGAGAACCAATCTACTTCCACAGATACAAACTTACTAGTCGACAATGCACCAAGAGTGCTATCAATAACTTCAGAAGATGAATTGCACAATATGAATGATTTGCAAAAGAACATTGAGGATCCAGTTATAGAACTTGATGCAAGCTTACCCCCCACTTCAATGGAGTTATCGTGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTACCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGGCTTTGAGCAGAAAAATCTCAACGTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACCTCGGATCAGAAGATATACTCCCAAACCATTCCATATGGATCACCATTATTGGATATTTACCTTCTATCTGATGAAAGAACTCTTAACAACGTTGTTCAGCCCTCTGTCGCAGCTGTTTGTAGTGCATGCCGTTGTCGGGAACCAGAGGACCTCCTCATGAGCTGCCATCTTTGTCAAATTCGACAGATTCATTCATATTGTCTGGACCCGCCATTGTTACCATGGACTTGTATTCACTGCAAGGATCTGCAGACACTCTACCATCGAAGCCATTAATTTGTCATCTTGAAATAAGGTGATTGCAAAGAGAAATTGAAGTTCGCTGAAGATTTTGAAAGCAAATAAAAGCCAATCTGCCTCCCACAAATCCTTCAATGCTAAGGTTGTG

Coding sequence (CDS)

ATGGAGGAAGAAGAGCACGAGGAAGACCATGGTCTCGCTAATACAATTCTTTCCTGCCCTAATACAATTCCCGGCTGTCCAATTGAAGGTATGGAATCTGTGGTTGTGACTGTCAGTGGCTACCATGGCACAGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCTAGCTATGTGGGTGCAATGTCAAGGTCTATTACTCATTTGATTTGTTGGGAATTACAAGGGAGGAAATTTGATCTTGCCAAGAAGTTTAGAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGGTCCTTACATTCTCCAAAGTGGGAAATCTGTAGGTCCCTTGTCAATGAAACTCCCTCTTGCTGACAAGGGCTCCGTCTCGGCCAAAAAGTATAACTTGCTTTCCGAAAAGTTACATAATTATGGAAATGTTGATGATCAAAGTATTAAAAACATATGCTCTTTTGGTGATTCAATCTTGCCCCGCTCTTCTTTGCTGGATAAGGATCTTTCCTCTGATTTTAGAAAAAGCGATGACACTGCTCATAAGCCAAAGGACAAATTGCGGAAGAGGATTTCTAAGCAAGAAGACCCATCAAGCTCAAGTAGCAGAAACCGTTTTGAGGAACCAACTTCTTCTGGTTTTTTTGCGATTGAGCGTGGTTGCTCTTCAAGCTTGGCGAGAGATGAAAGAAAAGGTGAAAGTAGTAATCAGGAATCTACTGTTAAATCTTCAAGGAAACGACACCTGCTTGTAAGTAATAACTCTAGTGAAGATCATAGCGAGCCTGACATTTGGAATTTTGTCCCAAAGCGGTATCATTTGGGAACTCGTAATAGTCTTACAGTTCCATCTAGCCATTGGGATGCTGAAACAGATATTGAAGTGGTAAACATTGGAGGAACATCTGACCGCGAACAGTTGTGTGATGAAAGGGGACTAGCAAGTGACAGGTTTGAAGGCGTTGAAGCTTGTGAGAACCAATCTACTTCCACAGATACAAACTTACTAGTCGACAATGCACCAAGAGTGCTATCAATAACTTCAGAAGATGAATTGCACAATATGAATGATTTGCAAAAGAACATTGAGGATCCAGTTATAGAACTTGATGCAAGCTTACCCCCCACTTCAATGGAGTTATCGTGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGAGTTTTACCCTGTGGGCACCGATTTTGCTATTCATGCATTCAGAACTGGGCAGATCACATGGCTTTGAGCAGAAAAATCTCAACGTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACCTCGGATCAGAAGATATACTCCCAAACCATTCCATATGGATCACCATTATTGGATATTTACCTTCTATCTGATGAAAGAACTCTTAACAACGTTGTTCAGCCCTCTGTCGCAGCTGTTTGTAGTGCATGCCGTTGTCGGGAACCAGAGGACCTCCTCATGAGCTGCCATCTTTGTCAAATTCGACAGATTCATTCATATTGTCTGGACCCGCCATTGTTACCATGGACTTGTATTCACTGCAAGGATCTGCAGACACTCTACCATCGAAGCCATTAA

Protein sequence

MEEEEHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSVGPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLSSDFRKSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDERKGESSNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAETDIEVVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSEDELHNMNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLNNVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH

Homology

[Close]

BLAST of PI0017676 vs. ExPASy Swiss-Prot
Match: O04251 (BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g02110 PE=4 SV=3)

HSP 1 Score: 84.7 bits (208), Expect = 3.4e-15
Identity = 44/114 (38.60%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 5   EHEEDHGL---ANTILSCP-NTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 64
           +H  D G+   AN+IL  P   + G P  G +++VV ++GY G +R ++++M+   G  +
Sbjct: 81  DHSFDIGMLDNANSILYRPLRDLNGIP--GSKALVVCLTGYQGHDREDIMRMVELMGGQF 140

Query: 65  VGAM-SRSITHLICWELQGRKFDLAKKFRTI-IVNHRWLEDCIKHGKRVPEGPY 113
              + +  +THLIC++ +G K++LAK+ + I +VNHRWLEDC+K+ K +PE  Y
Sbjct: 141 SKPLVANRVTHLICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of PI0017676 vs. ExPASy Swiss-Prot
Match: Q6ZW49 (PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 1.9e-05
Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 35  VVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAKKFRTIIVNH 94
           +++V+G+  ++R +L  M    GA Y G + RS T LIC E  G K++ AK++R   VN 
Sbjct: 710 IISVTGFVDSDRDDLKLMAYLAGAKYTGYLCRSNTVLICKEPTGLKYEKAKEWRIPCVNA 769

Query: 95  RWLEDCI 102
           +WL D +
Sbjct: 770 QWLGDIL 776

[Close]

BLAST of PI0017676 vs. ExPASy Swiss-Prot
Match: Q5XIY8 (PAX-interacting protein 1 OS=Danio rerio OX=7955 GN=paxip1 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 3.2e-05
Identity = 26/67 (38.81%), Postives = 41/67 (61.19%), Query Frame = 0


Query: 35  VVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAKKFRTIIVNH 94
           +++V+G+  ++R +L  M    GA Y G + RS T LIC E  G K++ AK++R   VN 
Sbjct: 772 IISVTGFVDSDRDDLKLMAYLAGARYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNA 831

Query: 95  RWLEDCI 102
           +WL D +
Sbjct: 832 QWLCDIL 838

[Close]

BLAST of PI0017676 vs. ExPASy Swiss-Prot
Match: Q90WJ3 (PAX-interacting protein 1 OS=Xenopus laevis OX=8355 GN=paxip1 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.2e-04
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 0


Query: 35  VVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAKKFRTIIVNH 94
           +++V+G+  ++R +L  M    GA Y G + RS T LIC E  G K++ AK++R   VN 
Sbjct: 899 IISVTGFVDSDRDDLKLMGYLAGAKYTGYLCRSNTVLICKEPSGLKYEKAKEWRIPCVNA 958

Query: 95  RWLEDCI 102
            WL D +
Sbjct: 959 LWLCDIL 965

[Close]

BLAST of PI0017676 vs. ExPASy TrEMBL
Match: A0A0A0L7F3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1)

HSP 1 Score: 1016.1 bits (2626), Expect = 5.3e-293
Identity = 506/542 (93.36%), Postives = 518/542 (95.57%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHGLANTILSCPN IPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSV 120
           VGAMSRSITHLICWELQGRKFDLA+KFRTIIVNHRWLEDCIKHGKRVPEGPYILQSG+S+
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120

Query: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKG VSAKKYNLLSEKLHNYGNV+DQSIK+ICSFGDSILPRSSLLDKDLS
Sbjct: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180

Query: 181 SDFRKSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDER 240
           SDFRKSDDTAHK K K+RKRISK EDPSSSSSRNRFEEPTS+G FAIE G  SSLARDER
Sbjct: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240

Query: 241 KGESSNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAE 300
           KGESSNQ+STVKSSR+R LLVSNNS EDH++PDI NF P+ Y LGTRNSLTVPS  WDAE
Sbjct: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSED 360
           TDIEVVNIGGTSDREQLCDERGLAS RFEGVEACENQSTS DTNLLVDNAPRVLSITSED
Sbjct: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIELDASLP TS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVE AATSDQKIYSQTIP GS LLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480

Query: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540
           NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR
Sbjct: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540

Query: 541 SH 543
           SH
Sbjct: 541 SH 542

[Close]

BLAST of PI0017676 vs. ExPASy TrEMBL
Match: A0A6J1J2R6 (E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111482151 PE=4 SV=1)

HSP 1 Score: 879.0 bits (2270), Expect = 1.0e-251
Identity = 431/536 (80.41%), Postives = 471/536 (87.87%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+GLAN ++ CPN   GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNGLANRVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSVGPLSMK 126
           SITHLICWEL+GRKF+LAKKF+TIIVNHRWLEDCIK G RVPE PYILQSG+S GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQGMRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +DKGSVS KKY + SEKLHN GNV+DQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDERKGESSN 246
           DDTAHK K KLRKRISK E+PSSSSS+N F+EPT S FFAI  G SSSLARDE KG+  N
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYN 242

Query: 247 QESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAETDIEVV 306
           + STV+SSR+   LV  NSSEDH++PD+WNF P++YHL TRNSLTV SSH D ETD EVV
Sbjct: 243 ENSTVRSSRRWRRLVKKNSSEDHNDPDVWNFDPEQYHLATRNSLTVLSSHCDDETDTEVV 302

Query: 307 NIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSEDELHNMN 366
           N+GGT+DR+QLCDERGLASD FEGVEACENQSTS  TNLLV+NAPR+L++TSEDELH   
Sbjct: 303 NVGGTADRDQLCDERGLASDSFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELH--K 362

Query: 367 DLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAL 426
           DLQK IEDPVIEL+ S+P T+ ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA 
Sbjct: 363 DLQKIIEDPVIELNESIPSTTTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS 422

Query: 427 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLNNVVQPS 486
           SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIP G  LLDIY+L DERTL++VVQPS
Sbjct: 423 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLDSVVQPS 482

Query: 487 VAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 543
           VAAVCS CRC+EPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of PI0017676 vs. ExPASy TrEMBL
Match: A0A5D3DV52 (BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold86G00240 PE=4 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 8.5e-251
Identity = 440/484 (90.91%), Postives = 456/484 (94.21%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHG AN ILSCPN IPGCPIEGMESVVVTVSGY GTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGRANRILSCPNRIPGCPIEGMESVVVTVSGYRGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSV 120
           VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNH WLEDCIKHGKRVPEGPYILQSG+SV
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHHWLEDCIKHGKRVPEGPYILQSGQSV 120

Query: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNV+DQSI +ICS  DSILPR SLLDKDLS
Sbjct: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLDKDLS 180

Query: 181 SDFRKSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDER 240
           SDFRKSDDTA+KPK K+RKRISKQEDPS SSSRN FEEPTSSGF AI+RG SSSLARD+R
Sbjct: 181 SDFRKSDDTANKPKYKVRKRISKQEDPSRSSSRNCFEEPTSSGFLAIKRGSSSSLARDKR 240

Query: 241 KGESSNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAE 300
           KGESSNQ+STVKSSR+RHLLVSNNSSEDH++PDIWNF P+RYHLGT NSL VPSSHW AE
Sbjct: 241 KGESSNQDSTVKSSRRRHLLVSNNSSEDHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSED 360
           TD+EVVNIGGTSD E+LCDERGLAS RFEG+EA ENQSTS DTNLLVDNAPRVL IT ED
Sbjct: 301 TDMEVVNIGGTSDCERLCDERGLASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIEL+ASLPPTS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELNASLPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIP G  LLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYLLSDERTLN 480

Query: 481 NVVQ 485
           NVVQ
Sbjct: 481 NVVQ 484

[Close]

BLAST of PI0017676 vs. ExPASy TrEMBL
Match: A0A5A7SZQ5 (BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold338G00140 PE=4 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 8.5e-251
Identity = 440/484 (90.91%), Postives = 456/484 (94.21%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHG AN ILSCPN IPGCPIEGMESVVVTVSGY GTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGRANRILSCPNRIPGCPIEGMESVVVTVSGYRGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSV 120
           VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNH WLEDCIKHGKRVPEGPYILQSG+SV
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHHWLEDCIKHGKRVPEGPYILQSGQSV 120

Query: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNV+DQSI +ICS  DSILPR SLLDKDLS
Sbjct: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLDKDLS 180

Query: 181 SDFRKSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDER 240
           SDFRKSDDTA+KPK K+RKRISKQEDPS SSSRN FEEPTSSGF AI+RG SSSLARD+R
Sbjct: 181 SDFRKSDDTANKPKYKVRKRISKQEDPSRSSSRNCFEEPTSSGFLAIKRGSSSSLARDKR 240

Query: 241 KGESSNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAE 300
           KGESSNQ+STVKSSR+RHLLVSNNSSEDH++PDIWNF P+RYHLGT NSL VPSSHW AE
Sbjct: 241 KGESSNQDSTVKSSRRRHLLVSNNSSEDHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSED 360
           TD+EVVNIGGTSD E+LCDERGLAS RFEG+EA ENQSTS DTNLLVDNAPRVL IT ED
Sbjct: 301 TDMEVVNIGGTSDCERLCDERGLASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIEL+ASLPPTS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELNASLPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIP G  LLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYLLSDERTLN 480

Query: 481 NVVQ 485
           NVVQ
Sbjct: 481 NVVQ 484

[Close]

BLAST of PI0017676 vs. ExPASy TrEMBL
Match: A0A6J1FAW6 (uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC111442404 PE=4 SV=1)

HSP 1 Score: 873.2 bits (2255), Expect = 5.5e-250
Identity = 430/536 (80.22%), Postives = 468/536 (87.31%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+GLAN ++ CPN   GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNGLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSVGPLSMK 126
           SITHLICWEL+GRKF+LAKKF+TIIVNHRWLEDCIKHGKRVPE PYILQSG+S GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +D+GSVS KKY + SEKLHN GN++DQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDQGSVSTKKYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDERKGESSN 246
           DDTAHK K KLRKRISK E+PSSSSS+N F+EPT S FFAI  G SSSLARDE KG+  N
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYN 242

Query: 247 QESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAETDIEVV 306
           + STV+SSR+   LV  NSSEDH+EPD+WNF P++YHL  RNS TV SSH D ETDIE V
Sbjct: 243 ENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAV 302

Query: 307 NIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSEDELHNMN 366
           NIGGT+D +QLCDERGLASD FEGVEAC NQSTS  TNLLV+NAPR+L+ TSEDELH  N
Sbjct: 303 NIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELH--N 362

Query: 367 DLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAL 426
            LQKNIED VIEL+ S+P TS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA 
Sbjct: 363 GLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS 422

Query: 427 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLNNVVQPS 486
            RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIP G+ LLDIY+L DERTL++VVQPS
Sbjct: 423 RRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPS 482

Query: 487 VAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 543
           VAAVCS CRCREPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of PI0017676 vs. NCBI nr
Match: XP_011651366.1 (uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharacterized protein LOC101213123 [Cucumis sativus] >XP_031739474.1 uncharacterized protein LOC101213123 [Cucumis sativus] >KGN57738.1 hypothetical protein Csa_011190 [Cucumis sativus])

HSP 1 Score: 1016.1 bits (2626), Expect = 1.1e-292
Identity = 506/542 (93.36%), Postives = 518/542 (95.57%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHGLANTILSCPN IPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSV 120
           VGAMSRSITHLICWELQGRKFDLA+KFRTIIVNHRWLEDCIKHGKRVPEGPYILQSG+S+
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSI 120

Query: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKG VSAKKYNLLSEKLHNYGNV+DQSIK+ICSFGDSILPRSSLLDKDLS
Sbjct: 121 GPLSMKLPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLS 180

Query: 181 SDFRKSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDER 240
           SDFRKSDDTAHK K K+RKRISK EDPSSSSSRNRFEEPTS+G FAIE G  SSLARDER
Sbjct: 181 SDFRKSDDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAIECGSPSSLARDER 240

Query: 241 KGESSNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAE 300
           KGESSNQ+STVKSSR+R LLVSNNS EDH++PDI NF P+ Y LGTRNSLTVPS  WDAE
Sbjct: 241 KGESSNQDSTVKSSRRRRLLVSNNSREDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSED 360
           TDIEVVNIGGTSDREQLCDERGLAS RFEGVEACENQSTS DTNLLVDNAPRVLSITSED
Sbjct: 301 TDIEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIELDASLP TS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVE AATSDQKIYSQTIP GS LLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLN 480

Query: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540
           NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR
Sbjct: 481 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 540

Query: 541 SH 543
           SH
Sbjct: 541 SH 542

[Close]

BLAST of PI0017676 vs. NCBI nr
Match: XP_038887153.1 (uncharacterized protein LOC120077302 [Benincasa hispida])

HSP 1 Score: 943.0 bits (2436), Expect = 1.2e-270
Identity = 465/538 (86.43%), Postives = 492/538 (91.45%), Query Frame = 0


Query: 5   EHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAM 64
           E E+DHGLAN +LSCPN +PGCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVGAM
Sbjct: 2   EEEQDHGLANGVLSCPNRLPGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGAM 61

Query: 65  SRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSVGPLS 124
           SRSITHLICWELQGRKF+LAKKFRTIIVNHRWLEDCIKHGKRVPEGPY+LQSG+  GPLS
Sbjct: 62  SRSITHLICWELQGRKFNLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYVLQSGQLAGPLS 121

Query: 125 MKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLSSDFR 184
           MKLPLA+KGSVS KK NLL EKLHNYGNVDDQSIK+ICSF DSILP SSLLDKDL SDFR
Sbjct: 122 MKLPLAEKGSVSTKKNNLLCEKLHNYGNVDDQSIKDICSFDDSILPHSSLLDKDLYSDFR 181

Query: 185 KSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDERKGES 244
            SD TAHK KD LR+RISKQED SSSSSRN FEEPT SGFFAIERG SS LARDERKGES
Sbjct: 182 NSDVTAHKAKDILRRRISKQEDSSSSSSRNHFEEPTPSGFFAIERGSSSRLARDERKGES 241

Query: 245 SNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAETDIE 304
           SNQ+STV SSR+   LV+ NS+EDH++ DIWNF  +R HLGTRNSLT PSSHWD ET+IE
Sbjct: 242 SNQDSTVNSSRRCRRLVNKNSTEDHNKADIWNFDLRRNHLGTRNSLTGPSSHWDDETNIE 301

Query: 305 VVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSEDELHN 364
           VVNIGGTSDR+QL DERGL+SD FEG+EACE+QSTS DTNL V+NAPR  SITSEDELHN
Sbjct: 302 VVNIGGTSDRDQLWDERGLSSDSFEGIEACEDQSTSRDTNLQVENAPRGSSITSEDELHN 361

Query: 365 MNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM 424
           +N+LQKNIEDPVIEL+ASLP TS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM
Sbjct: 362 INNLQKNIEDPVIELNASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHM 421

Query: 425 ALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLNNVVQ 484
           ALSRKISTCPLCKA+FLSITKVEDAATSDQKIYSQTIP G  LLDIY+L DERTLNNVVQ
Sbjct: 422 ALSRKISTCPLCKATFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLNNVVQ 481

Query: 485 PSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 543
           PSVAAVCSACRCREPEDLLMSCHLCQIR IHSYCLDPPLLPWTCIHCKDLQ LYHRSH
Sbjct: 482 PSVAAVCSACRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWTCIHCKDLQILYHRSH 539

[Close]

BLAST of PI0017676 vs. NCBI nr
Match: XP_022983591.1 (E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1 E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima])

HSP 1 Score: 879.0 bits (2270), Expect = 2.1e-251
Identity = 431/536 (80.41%), Postives = 471/536 (87.87%), Query Frame = 0


Query: 7   EEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66
           E+D+GLAN ++ CPN   GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 3   EQDNGLANRVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62

Query: 67  SITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSVGPLSMK 126
           SITHLICWEL+GRKF+LAKKF+TIIVNHRWLEDCIK G RVPE PYILQSG+S GPLSMK
Sbjct: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQGMRVPEDPYILQSGQSAGPLSMK 122

Query: 127 LPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLSSDFRKS 186
           LP +DKGSVS KKY + SEKLHN GNV+DQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 123 LPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182

Query: 187 DDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDERKGESSN 246
           DDTAHK K KLRKRISK E+PSSSSS+N F+EPT S FFAI  G SSSLARDE KG+  N
Sbjct: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGCGSSSSLARDETKGKRYN 242

Query: 247 QESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAETDIEVV 306
           + STV+SSR+   LV  NSSEDH++PD+WNF P++YHL TRNSLTV SSH D ETD EVV
Sbjct: 243 ENSTVRSSRRWRRLVKKNSSEDHNDPDVWNFDPEQYHLATRNSLTVLSSHCDDETDTEVV 302

Query: 307 NIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSEDELHNMN 366
           N+GGT+DR+QLCDERGLASD FEGVEACENQSTS  TNLLV+NAPR+L++TSEDELH   
Sbjct: 303 NVGGTADRDQLCDERGLASDSFEGVEACENQSTSRHTNLLVENAPRILTVTSEDELH--K 362

Query: 367 DLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAL 426
           DLQK IEDPVIEL+ S+P T+ ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMA 
Sbjct: 363 DLQKIIEDPVIELNESIPSTTTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMAS 422

Query: 427 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLNNVVQPS 486
           SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIP G  LLDIY+L DERTL++VVQPS
Sbjct: 423 SRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLDSVVQPS 482

Query: 487 VAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 543
           VAAVCS CRC+EPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 483 VAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of PI0017676 vs. NCBI nr
Match: KAA0036113.1 (BRCT domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 875.9 bits (2262), Expect = 1.8e-250
Identity = 440/484 (90.91%), Postives = 456/484 (94.21%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHG AN ILSCPN IPGCPIEGMESVVVTVSGY GTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGRANRILSCPNRIPGCPIEGMESVVVTVSGYRGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSV 120
           VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNH WLEDCIKHGKRVPEGPYILQSG+SV
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHHWLEDCIKHGKRVPEGPYILQSGQSV 120

Query: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNV+DQSI +ICS  DSILPR SLLDKDLS
Sbjct: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLDKDLS 180

Query: 181 SDFRKSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDER 240
           SDFRKSDDTA+KPK K+RKRISKQEDPS SSSRN FEEPTSSGF AI+RG SSSLARD+R
Sbjct: 181 SDFRKSDDTANKPKYKVRKRISKQEDPSRSSSRNCFEEPTSSGFLAIKRGSSSSLARDKR 240

Query: 241 KGESSNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAE 300
           KGESSNQ+STVKSSR+RHLLVSNNSSEDH++PDIWNF P+RYHLGT NSL VPSSHW AE
Sbjct: 241 KGESSNQDSTVKSSRRRHLLVSNNSSEDHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSED 360
           TD+EVVNIGGTSD E+LCDERGLAS RFEG+EA ENQSTS DTNLLVDNAPRVL IT ED
Sbjct: 301 TDMEVVNIGGTSDCERLCDERGLASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIEL+ASLPPTS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELNASLPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIP G  LLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYLLSDERTLN 480

Query: 481 NVVQ 485
           NVVQ
Sbjct: 481 NVVQ 484

[Close]

BLAST of PI0017676 vs. NCBI nr
Match: TYK27606.1 (BRCT domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 875.9 bits (2262), Expect = 1.8e-250
Identity = 440/484 (90.91%), Postives = 456/484 (94.21%), Query Frame = 0


Query: 1   MEEEEHEEDHGLANTILSCPNTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 60
           MEEEEHEEDHG AN ILSCPN IPGCPIEGMESVVVTVSGY GTERFNLIKMISYTGASY
Sbjct: 1   MEEEEHEEDHGRANRILSCPNRIPGCPIEGMESVVVTVSGYRGTERFNLIKMISYTGASY 60

Query: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGKSV 120
           VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNH WLEDCIKHGKRVPEGPYILQSG+SV
Sbjct: 61  VGAMSRSITHLICWELQGRKFDLAKKFRTIIVNHHWLEDCIKHGKRVPEGPYILQSGQSV 120

Query: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVDDQSIKNICSFGDSILPRSSLLDKDLS 180
           GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNV+DQSI +ICS  DSILPR SLLDKDLS
Sbjct: 121 GPLSMKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLDKDLS 180

Query: 181 SDFRKSDDTAHKPKDKLRKRISKQEDPSSSSSRNRFEEPTSSGFFAIERGCSSSLARDER 240
           SDFRKSDDTA+KPK K+RKRISKQEDPS SSSRN FEEPTSSGF AI+RG SSSLARD+R
Sbjct: 181 SDFRKSDDTANKPKYKVRKRISKQEDPSRSSSRNCFEEPTSSGFLAIKRGSSSSLARDKR 240

Query: 241 KGESSNQESTVKSSRKRHLLVSNNSSEDHSEPDIWNFVPKRYHLGTRNSLTVPSSHWDAE 300
           KGESSNQ+STVKSSR+RHLLVSNNSSEDH++PDIWNF P+RYHLGT NSL VPSSHW AE
Sbjct: 241 KGESSNQDSTVKSSRRRHLLVSNNSSEDHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAE 300

Query: 301 TDIEVVNIGGTSDREQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSED 360
           TD+EVVNIGGTSD E+LCDERGLAS RFEG+EA ENQSTS DTNLLVDNAPRVL IT ED
Sbjct: 301 TDMEVVNIGGTSDCERLCDERGLASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPED 360

Query: 361 ELHNMNDLQKNIEDPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELHNMNDLQKNIEDPVIEL+ASLPPTS ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 361 ELHNMNDLQKNIEDPVIELNASLPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420

Query: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDIYLLSDERTLN 480
           ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIP G  LLDIYLLSDERTLN
Sbjct: 421 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYLLSDERTLN 480

Query: 481 NVVQ 485
           NVVQ
Sbjct: 481 NVVQ 484

[Close]

BLAST of PI0017676 vs. TAIR 10
Match: AT1G67180.1 (zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein )

HSP 1 Score: 343.2 bits (879), Expect = 3.8e-94
Identity = 209/529 (39.51%), Postives = 282/529 (53.31%), Query Frame = 0


Query: 31  MESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSRSITHLICWELQGRKFDLAKKFRTI 90
           ME+VV TVSGYHG++RF LIK+IS++GASYVGAMSRSITHL+CW+ +G+K+DLAKKF T+
Sbjct: 1   MENVVATVSGYHGSDRFKLIKLISHSGASYVGAMSRSITHLVCWKFEGKKYDLAKKFGTV 60

Query: 91  IVNHRWLEDCIKHGKRVPEGPYILQSGKSVGPLSMKLPLADKGSVSAKKYNLLSEKLHNY 150
           +VNHRW+E+C+K G+RV E PY+  SG+ VGPL ++LP   + +   KK N  SE    Y
Sbjct: 61  VVNHRWVEECVKEGRRVSETPYMFDSGEEVGPLMIELPAVSEEAKVTKKVNKASETFDKY 120

Query: 151 GNVDDQSIKNICSFGDSILPRSSLLDKDLSSDFRKSDDTAHKPKDKLRKRISKQEDPSSS 210
                                           F    +       +L   + K  + +  
Sbjct: 121 --------------------------------FSNGGENRSGSTSELATWMEKNVEANRH 180

Query: 211 SSRNRFEEPTSSGFFAIERGCSSSLARDERKGESS-----------NQESTVKSSRKRHL 270
           S R R + P+S     +E   +S +A   RKG+             + ES  +S    H 
Sbjct: 181 SVRLRTKRPSS----ILENKENSGVAESSRKGKKRVVKQRSYRNLIDLESDEESDNNHHD 240

Query: 271 LVSNNSSE--DHSEPDIWNFVPKRYHLGTRNSLTVP----SSHWDAETDIEVVNIGGTSD 330
               N +E  DH EP   N     +  G  ++L  P    + +WD +             
Sbjct: 241 NSDENQNETQDHREPADENVRGFVFEQGETSALRHPGDLATPNWDVDE------------ 300

Query: 331 REQLCDERGLASDRFEGVEACENQSTSTDTNLLVDNAPRVLSITSEDELHNMNDLQKNIE 390
                            +E  EN S S      V   PR  S     E+   +D +   E
Sbjct: 301 -----------------IEESENWSHSA-----VFKRPRSFS----PEIKPQDDDESTRE 360

Query: 391 DPVIELDASLPPTSMELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMALSRKISTC 450
           +   E     P    ++SC+ICWT+FSS+RG+LPCGHRFCYSCIQ WAD +   RK +TC
Sbjct: 361 E--TEATEKAP---AQVSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSERKKTTC 420

Query: 451 PLCKASFLSITKVEDAATSDQKIYSQTIPYGSPLLDI-YLLSDERTLNNVVQP-SVAAVC 510
           PLCK++F++ITK+EDA +SDQKIYSQT+P  S   +I  +L +E      + P + A+ C
Sbjct: 421 PLCKSNFITITKIEDADSSDQKIYSQTVPDLSSTNNILVVLPEEEEQRQTLNPLTRASGC 450

Query: 511 SACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHR 541
           S C   EPE+LL+ CHLC  R+IHSYCLDP LLPWTC HC DLQ +YHR
Sbjct: 481 SRCYLTEPEELLIRCHLCNFRRIHSYCLDPYLLPWTCNHCNDLQMMYHR 450

[Close]

BLAST of PI0017676 vs. TAIR 10
Match: AT4G02110.1 (transcription coactivators )

HSP 1 Score: 84.7 bits (208), Expect = 2.4e-16
Identity = 44/114 (38.60%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 5   EHEEDHGL---ANTILSCP-NTIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASY 64
           +H  D G+   AN+IL  P   + G P  G +++VV ++GY G +R ++++M+   G  +
Sbjct: 81  DHSFDIGMLDNANSILYRPLRDLNGIP--GSKALVVCLTGYQGHDREDIMRMVELMGGQF 140

Query: 65  VGAM-SRSITHLICWELQGRKFDLAKKFRTI-IVNHRWLEDCIKHGKRVPEGPY 113
              + +  +THLIC++ +G K++LAK+ + I +VNHRWLEDC+K+ K +PE  Y
Sbjct: 141 SKPLVANRVTHLICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of PI0017676 vs. TAIR 10
Match: AT1G77320.1 (transcription coactivators )

HSP 1 Score: 52.0 bits (123), Expect = 1.8e-06
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 27  PIEGMESVVVTVSGYHGTERFNLIKMISYT-GASYVGAMSRSITHLICWELQGRKFDLAK 86
           P+ G ES+ +  S  H  +   L++ +S   GA +V  ++R +THLIC   +G K+  A 
Sbjct: 660 PLPGFESLCI-CSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRAS 719

Query: 87  KFRTIIVNHRWLEDCIKHGKRV 108
           K+  I V   WL +C++  + V
Sbjct: 720 KWGIISVTPDWLYECVRQNQVV 740

[Close]

BLAST of PI0017676 vs. TAIR 10
Match: AT1G77320.2 (transcription coactivators )

HSP 1 Score: 52.0 bits (123), Expect = 1.8e-06
Identity = 27/82 (32.93%), Postives = 45/82 (54.88%), Query Frame = 0


Query: 27  PIEGMESVVVTVSGYHGTERFNLIKMISYT-GASYVGAMSRSITHLICWELQGRKFDLAK 86
           P+ G ES+ +  S  H  +   L++ +S   GA +V  ++R +THLIC   +G K+  A 
Sbjct: 643 PLPGFESLCI-CSSQHNEKNVELLRNLSVVLGADFVERLTRKVTHLICNFAKGDKYVRAS 702

Query: 87  KFRTIIVNHRWLEDCIKHGKRV 108
           K+  I V   WL +C++  + V
Sbjct: 703 KWGIISVTPDWLYECVRQNQVV 723

The following BLAST results are available for this feature:

BLAST of PI0017676 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04251	3.4e-15	38.60	BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]
Q6ZW49	1.9e-05	38.81	PAX-interacting protein 1 OS=Homo sapiens OX=9606 GN=PAXIP1 PE=1 SV=2	[more]
Q5XIY8	3.2e-05	38.81	PAX-interacting protein 1 OS=Danio rerio OX=7955 GN=paxip1 PE=2 SV=1	[more]
Q90WJ3	1.2e-04	38.81	PAX-interacting protein 1 OS=Xenopus laevis OX=8355 GN=paxip1 PE=1 SV=1	[more]

BLAST of PI0017676 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7F3	5.3e-293	93.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1	[more]
A0A6J1J2R6	1.0e-251	80.41	E3 ubiquitin-protein ligase rnf8-A isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A5D3DV52	8.5e-251	90.91	BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5A7SZQ5	8.5e-251	90.91	BRCT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A6J1FAW6	5.5e-250	80.22	uncharacterized protein LOC111442404 OS=Cucurbita moschata OX=3662 GN=LOC1114424...	[more]

BLAST of PI0017676 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011651366.1	1.1e-292	93.36	uncharacterized protein LOC101213123 [Cucumis sativus] >XP_011651367.1 uncharact...	[more]
XP_038887153.1	1.2e-270	86.43	uncharacterized protein LOC120077302 [Benincasa hispida]	[more]
XP_022983591.1	2.1e-251	80.41	E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1...	[more]
KAA0036113.1	1.8e-250	90.91	BRCT domain-containing protein [Cucumis melo var. makuwa]	[more]
TYK27606.1	1.8e-250	90.91	BRCT domain-containing protein [Cucumis melo var. makuwa]	[more]

BLAST of PI0017676 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67180.1	3.8e-94	39.51	zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing pro...	[more]
AT4G02110.1	2.4e-16	38.60	transcription coactivators	[more]
AT1G77320.1	1.8e-06	32.93	transcription coactivators	[more]
AT1G77320.2	1.8e-06	32.93	transcription coactivators	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 28..104 e-value: 7.4E-13 score: 58.7
IPR001357	BRCT domain	PFAM	PF12738	PTCB-BRCT	coord: 34..96 e-value: 6.0E-18 score: 64.6
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 31..114 score: 16.42762
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 392..436 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 391..437 e-value: 1.3E-9 score: 38.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 392..437 score: 13.344952
IPR036420	BRCT domain superfamily	GENE3D	3.40.50.10190	BRCT domain	coord: 28..119 e-value: 1.7E-24 score: 88.0
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 29..115
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 353..462 e-value: 4.2E-14 score: 54.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..212
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..271
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..273
None	No IPR available	PANTHER	PTHR47776	F5A8.9 PROTEIN	coord: 27..540
None	No IPR available	CDD	cd16449	RING-HC	coord: 392..436 e-value: 3.53893E-7 score: 44.7657
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 391..445
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 408..417
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	57903	FYVE/PHD zinc finger	coord: 484..532

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017676.2	PI0017676.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0046872	metal ion binding