PI0017632 (gene) Melon (PI 482460) v1

Overview


Name	PI0017632
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	cytochrome c-type biogenesis ccda-like chloroplastic protein
Location	chr06: 24561838 .. 24567971 (-)
RNA-Seq Expression	PI0017632
Synteny	PI0017632

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGAAGAAGAAATCTGGGATTGACAACTAACAACCTGAAAAAATCTCATTCAACATCCGACCACTGTCTCACTTCTCAATTAACTCTGCTTCCAATTCCGCACTTTTTTCCTAATTTTCCAGATGAGTCTCCTTATGAGCAATTCTGGTGGTTTCATCACCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACACCCTAACACACCAGGTATTACCTTTCATTTCGCTGTATAACTATGGGAGTTGCGAATATTTATAGTTTCAAACAAGTCACTGAAACACTATTTGAAGATGTAGACAAATTTTGGGTATTCAATGGTATATCCAAGGAGAAAATTTAGGGAACGTATGGTTTGATGAACTGTAGGGGTTGTTTTGATCATGTTGTATTCAACTTTCTAATAGAGGGTCACTGGTTTCTTTAGGTAAATATGTCATGCCCATGAAATTTCTTGGGAGACAATCCGCAGCTGATGATCAATGTAAAGATATTGAGCTGGTGGAGAATAGAAACAGCCGCAATTGTTTTCAAGCTATGACTTTTGTAAATGCTATTTCTGGTAAGGCTTTCGCACGAACACTTCAGTTTGACATGTTTCCATCGCTTGTGTTAATGCAATAAATGTGTTAAACATTCATAAAACACTTGTTGAGTAGACTAAAAAGATGCATCTATGAAAATAATAATAGATTTTTATTAGCAGTAATTTTTTTAGCATATAAATGCATTAACCCATTTATTTTGAATTTTCTTCTATTATAAAAATGACAAACACATATATATGATTTTTTTTTAAATGTATATTTCAATAATTGTGTCCTTGCCGTGTCATGTCCTAAATTTTTAAAAGACGGCGTGTCTCTGTGTTTGTGGTATGTCTCGTATCCATAGTTATGCTTCTTAGGGCTTCTGCTCTCTTCCTGGGGTGGATGATGGTTCTACTTCAATCTCGTTATAATAATTTATTTATGTTCTTTTTCAATCCATAGTTTGTTCATTATTTAACTATGATTGGTAATTTCATAAGTAACTGTAAGCAATCAGGTGTATGGTATCATAGGCAGCCTCTTATTTTCCTTTTAAATCCTGGTTTTCACTCCAAGTAAAATAGGCTGTACTTTACCTGCTTCAATGCTGCTGTGGTTTAGCACGGATTTTCTTAATTTTATTTCGTTTTCAATATTCCAGCGACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAAGTTTAAAGCATATGTGGGTAAGAGTTAGTCGTGCATTTTGTTTTCTAAAGCCACATGAATCTTTATTCTTTTGAGACTTTAATTCCCTAAAATCCATTTATTCAATTACTTTTAAAGATTTTCTATATTACTTTTCACCAATTCCTTTTAAAATCTTGATGAAATGTATATGTATTTCTATTTTCCTTTGGACATATAGTTGTGAGATGTTTCTTTTTTGTAAGTGAGTTTCAATTGTTTATGCTTTTATTATGACCAAGTTTTTAATTTTTGATTTATTTAGTTATTTCACTACTTTTTGGGATGAGGTATGCGTTTGCCAGATAAGAATGGTCAACTCATTATGACTTCAATAGAAAACGAAGCTTGGTAATAGGACTGCTCTTTAGCATTACTTTCCATCTTTGTTTGCTTGGTTAAGATGTTGGTCTCTATCAATTGGATATCATGGTAACTAAATTAGTCTGCATATATATTATGCTTGGTGTATAACTGTACATTATATCAGGAACTAGAATTATTTTCCTTCAAGTCAGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCGGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGGTTCAGTCTTGTTTTTCTGCCCTTTACATTTCATGTCTTTTAAGGATTTGAATTTGATAGCAAACGGCTTTTTTTCTATTTTTCTGCCCTTGACCACTAATTCCTTTTTACAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGTAAGCATCTCATACATATATTTTTGGAATCTTGGTATGTTATTTTCCTGTCTTATGTTGATGTTGTGATCCAATGGAACTTTGTAGGAGCTTTTGGATCAGGCAAGAGCAAAGCAGAGGTAAATTACTTTCTACACGAGTTCCAATTTTCTTCTCTTTGCTCTTGTGACTGTGGTATCAAATTATAGAAATCTCCAAATCAATTGAGCACTAGAGGCTCAACCCTCTAGGTTGAAAGTTTAGGCCCCGTTTGATAACCATTTGGTTTTGGTTTTGGTTTTGGTTTTTTGTTTTTTAAATATAAGTTTATAAACACTATTTCCACCCATATGTTTCTATATTCTATTATCAACTTTCTACTAACATTTAAAGAAAACAAGCGACATTTTGAAAATTAGGGAAAAAAAAGTTTTTATTATTAGAATTTGACTAAGAATTCAAGTGTTTATTTAACAAAAGATAACCATAATTGGAAAAATTTATAGAAAATGAGTGAAGATTTTAAACACAAAAAACCAAAAGCCAAAATCGTTATCATGTAGGGCCTTAATAGTTTATAACCCTGGTTGTCATCTGTGAGTTGGGCTTGGGGTCGACAAAACGTTAATGAGATAAGTGGGGCTGGCCGTGAGTCTATTGTAAAGAGTGGGGCCCTTCAACACCCTGGTTATAGAAAAATAATAATAATAAACCAGGACTAGAAAGAAACTATTCAATGGTTCTACGATGACAGTCTTCATATTCTTTGCCTGTCCAGATTTATCATCATTGTTACTTTATCTTCTAGTTAATTTGAAATTGAGAGCATTTTGTTAGGCCACCAATTATATTGCTATACCAAGGAGGGGGGTAATGAGGGCATGGCTTATGTAATGGGCAGTGGTGGCTTCAACATCCAATAGTAATTGAGTGGTCCCCACAGTTAGTTAACGAGGAGAGAGAGAGTATTTGTGTAGGAAGGGAAGACATTGCAAACACTTTTGATTTTCGGTTGAGTCATCTTCTCGAGAGAGACGAGGGAATCCTTGCTTCCGTGAGAGGCTGGATGTTGTGATTTGCCTTGGAGCAATCATTTCCATTTGAATAAGACTTCCTTATTTACCTATCACATTTCTATTGAAATATATGCATCGATGTGAGCGGATGAGTAAGGGAATAGTAATAGAATATTTCTAAGGGCACAGTGGTAATTAGCTTTTGGTGCTTTGGATATCAGGGAAGTTGGACACCTTAGGGGAGATCATTTTCATAAGTCAGGACTCAGTGTATTTGTTGTAGAAGAGAGATAACCCTCTCGAAAGGTTATTGATATTGTAATTTCTTCATTGATATTGCAATATAGTAATCTTTAGTGTTTTTCACATATATTCTGTGTTGCTATCCAGATAGAGTCCTTATACTCTGATGGTTGGGGTGAATATGCACATATGTGAGATGGTTTTCATAGAAATGGTTAAAAACTGTGCTGATGGTCTTGCTTTGAGAAAGGAAGTTAATTGGAATTTGATCTCTTCATATTTTCAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGGTACTCATCAAAACATGATTAGATATTCGAAGAGTACTTTGGTATATCATTACCTATTATTAACAATCATCTCTTTTGTGGAAAGAATACTTAAATTTGTCTCATTCTAAATGTTTCGCTTATTTGTATTTGTTAGTGGGTTGCAGAACCTGATACCCAAGTACTCGGACTGCTTTTTTCACAATGTCGTTTTGGAATAGTCTTCTGATGGATTGATTCTATAATTTGTCACGAATTGCAGATAATTGAGTTGCAATTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGTAATTGGCCTCTCCATTTCTTTTGGCTACTGGTTACTTACCTGGTCTCTCCTAACAAGATTTTAAATCTGATGTATTAGGCGTGCAAGCATATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGTGCCCTAAAGTGTTTCTTACACTGATTCGATTTGATCTTAGTTTCAATAGATTGAATTATATATGATTCTTAATGAATTCTTGAAATTAAAAAATGTCATGTATATATGATATCGACCGGTTGTGACTTTGATCGTGTTCTCTCTTAAACCTGGCCTTGGAGCTTTGAAACCTTTTTAGTGAATCAGTTGGGTTGATAACCAACCTAATTGTCGAAGAAGGATGTTGTAATCCTTGTCCTTAGTGTGCCCTGTTAATGACTACTCTTTTTTATAACAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGTTATGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCCGGAGCATTGCAGGTAATATTGTTATAATAGGAAGGAGAACTTACCTGCATATAGATATTTTGTCTACAATGTACTATAAGTTTATCATGTGACTTTTTAAAAGTTTGCCCTTTTGTTATTTTTGATGCTCTAATTCAATGGAGATTGCTGTAATCTTGGGTTTTGTTATCTAAATGACTCTTGTATGCCTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGGTAATTCCTTTTAAACTCATCTTCACTTAATTAAGATTACAGATTAAATGTTAATTTTCAAAAGTTTGGAATCATCATGAGTTGACTTAATGGTAAAAGAAGATATATAGTCTCAATAACCTAAGTCATGAGTTTAGTCCATGACGCCCATTTACCTAAGAATTAATTTCGTACAAGCTTCCTTGACATCCAAATGTTGTAGTTAGATAGGTTGTTCCATGAGATTAGTGAAGGTGCAGACAAGCTGGCTCGAACACTCACAAATATAAAAAAAAAATATTCAAAGGTTTGGTTTTGAACAAAGGAAAAAGATAAAAGATGTTCAAACTTCAAAACACAATCAATTTTATTTTCTAAAAATGCATATAAAAGAAATGCACCTCTTCTCTAAAGTTATTCTAAACTCACCTAAAAAAATTCCCCCTAAAATAGGGGTTGCAATGAAAACACATCCAAGAAAAAGTCAGGTTTGTTGGGAAAAAACGATGTATAAGAACTAAATAAATCTAGCAAATTCAAAAGTAAGTAAGATGAAGCAACTAAAACCTATAAAGAGACGTCTTTCTGATAACCGCTATTCCGAGGACTATTATAACAACCTCAAACTGCTAGGATCTAATGAAGTTTTGTATACTGATTAAAAAACCTCTTCAAATTGGAATGAGATGCTTAAGGTGAATAAACAATTTGCAATTCATAGACTAAGAGCTTGGTAATCTTCTAAATATACAATAAAATCAAATAGATACAAAATTGAATTATTATTTTTTTAAATATAAACAAAATTCATCAAATGGTAGAAGAATTTAATCTAACTATTAATTCCATAAAGAATTCACCATTTTCATCATACCATTAAAATATGCAACAAGATTTCACATTAAAGTATGGATAAAGTTTATGAATTGATATGTTTTAGTAGATGAAATGAGATGTTTGAAGTGGGTTTTGTTTGTTGTTTGATGCATATGCAGTGGCGCACTACTATTGGGTGGAGGTCTATATACATTCTTGGACAGATTGTTTCCAGTCACAATGGCAATGTAAGATTGATTTATAAATTATGTAAAGAAATATATTCAAAGTCCTTAGATAAAATGACAAGACTATGTTGCTCTCATTCAATGGTCCATATTTTTCTGTGTTTCTTTTGGCCTCACTATCTTTAATTTTATGTGGATAAAGATCAACCGTCATAAATATCCCAATCTCAAGTTTCAAAGATAATCTATTATTACCGACTTAACGAGTTC

mRNA sequence

CAGAAGAAGAAATCTGGGATTGACAACTAACAACCTGAAAAAATCTCATTCAACATCCGACCACTGTCTCACTTCTCAATTAACTCTGCTTCCAATTCCGCACTTTTTTCCTAATTTTCCAGATGAGTCTCCTTATGAGCAATTCTGGTGGTTTCATCACCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACACCCTAACACACCAGGTAAATATGTCATGCCCATGAAATTTCTTGGGAGACAATCCGCAGCTGATGATCAATGTAAAGATATTGAGCTGGTGGAGAATAGAAACAGCCGCAATTGTTTTCAAGCTATGACTTTTGTAAATGCTATTTCTGCGACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAAGTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCGGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGAGCTTTTGGATCAGGCAAGAGCAAAGCAGAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCAATTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGCGTGCAAGCATATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGTTATGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCCGGAGCATTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGCGCACTACTATTGGGTGGAGGTCTATATACATTCTTGGACAGATTGTTTCCAGTCACAATGGCAATGTAAGATTGATTTATAAATTATGTAAAGAAATATATTCAAAGTCCTTAGATAAAATGACAAGACTATGTTGCTCTCATTCAATGGTCCATATTTTTCTGTGTTTCTTTTGGCCTCACTATCTTTAATTTTATGTGGATAAAGATCAACCGTCATAAATATCCCAATCTCAAGTTTCAAAGATAATCTATTATTACCGACTTAACGAGTTC

Coding sequence (CDS)

ATGAGTCTCCTTATGAGCAATTCTGGTGGTTTCATCACCAATTCCATCAAAATTTCAACCTCTAAACGTTTACAACACCCTAACACACCAGGTAAATATGTCATGCCCATGAAATTTCTTGGGAGACAATCCGCAGCTGATGATCAATGTAAAGATATTGAGCTGGTGGAGAATAGAAACAGCCGCAATTGTTTTCAAGCTATGACTTTTGTAAATGCTATTTCTGCGACAAGTTTCCTTGCAGTAGACGCCGCAAAGGCTGAAAGTTTAAAGCATATGTGGGAAGGAGCTGCTTCTGTTTATACTCTGGCTGATGGTGGCATTGGAGATTGGTTTGGAGGCTTCTTGTATTCGGCTGGACAACAGGCTAATGTTGCAGTTCAGGATCAGTTATCTGCTCTTAGTTTTACAAGTTTGGCAGTAATTTTTGGGGCAGGGTTCGTAACAAGCCTTTCCCCTTGCACACTGAGTGTTTTGCCTTTGACCCTTGGTTACATTGGAGCTTTTGGATCAGGCAAGAGCAAAGCAGAGGTTGTTGGAAACTCTGTTGCTTTCTCATTAGGACTTGCTACCACCCTAGCGCTGTTAGGTATAGGAGCTTCTTTTGCTGGAAAGGCATATGGACAGATTGGCCAAGGATTACCATTGGCTGCTTCAGGCTTAGCTGTTATTATGGGCCTAAACCTACTGGAGATAATTGAGTTGCAATTACCCTCATTCTTCGACAATTTCGATCCCCGTTCTGCTGCTGCCAACTTTCCATCAAGCGTGCAAGCATATCTAGCCGGGCTAACATTTGCTTTGGCTGCATCTCCTTGCAGTACTCCTGTGCTGGCTACTTTACTTGGATATGTAGCTACATCCAAGGATCCCGTCATCGGGGGTAGCCTCCTTTTGACATACACAACCGGTTATGTCGTGCCGTTACTTCTTGCTGCCTCATTTGCCGGAGCATTGCAGAGTCTTCTGTCTTTCCGCAAGTTCTCATCATGGATTAATCCTATAAGTGGCGCACTACTATTGGGTGGAGGTCTATATACATTCTTGGACAGATTGTTTCCAGTCACAATGGCAATGTAA

Protein sequence

MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRNSRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM

Homology

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BLAST of PI0017632 vs. ExPASy Swiss-Prot
Match: Q9M5P3 (Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thaliana OX=3702 GN=CCDA PE=1 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 7.6e-120
Identity = 238/310 (76.77%), Postives = 267/310 (86.13%), Query Frame = 0


Query: 52  DIELVENRNSRNCFQAMTFVNAISATSFLAVDAAKAESLKH-MWEGAASVYTLADGGIGD 111
           D   +E   S++   AM   + +   + + + +AKA  LK  + + A S+Y LA+G +GD
Sbjct: 46  DAVSLERLESKSIKLAM-LASGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGD 105

Query: 112 WFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG 171
             G FLYSA QQAN AVQDQLSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFG
Sbjct: 106 SVGNFLYSANQQANEAVQDQLSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG 165

Query: 172 SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL 231
           SGKS+ +V+G++VAF+LGLATTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLL
Sbjct: 166 SGKSRGQVIGDTVAFALGLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLL 225

Query: 232 EIIELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD 291
           EIIELQLPSFF+NFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+D
Sbjct: 226 EIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRD 285

Query: 292 PVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLD 351
           PVIGGSLLLTYTTGYV PL++AASFAGALQSLLS RK S+WINPISGALLLGGGLYTFLD
Sbjct: 286 PVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLD 345

Query: 352 RLFP-VTMAM 360
           RLFP  TM M
Sbjct: 346 RLFPAATMVM 354

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BLAST of PI0017632 vs. ExPASy Swiss-Prot
Match: Q2QY07 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA2 PE=3 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 1.3e-119
Identity = 228/283 (80.57%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 74  ISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSA 133
           ++  S +A  AA A  +     G++ +  LAD  IGDWFG  LYSAGQQAN AVQDQLSA
Sbjct: 77  VAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSIGDWFGNLLYSAGQQANEAVQDQLSA 136

Query: 134 LSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTL 193
           LSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLATTL
Sbjct: 137 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTL 196

Query: 194 ALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRSAAANF 253
           A+LG+ ASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF ++DPR+AAAN 
Sbjct: 197 AILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANL 256

Query: 254 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAA 313
           PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV PLL+AA
Sbjct: 257 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAA 316

Query: 314 SFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVT 357
           SFAGALQSLLSFR++S+WINPISGA LLGGG+YT LDRLFP T
Sbjct: 317 SFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 358

[Close]

BLAST of PI0017632 vs. ExPASy Swiss-Prot
Match: Q2RAR6 (Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CCDA1 PE=2 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 1.7e-119
Identity = 227/283 (80.21%), Postives = 253/283 (89.40%), Query Frame = 0


Query: 74  ISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAGQQANVAVQDQLSA 133
           ++  S +A  AA A  +     G++ +  LAD  +GDWFG  LYSAGQQAN AVQDQLSA
Sbjct: 82  VAVGSLVAAGAANATEIGDSLLGSSGL-ALADLSVGDWFGNLLYSAGQQANEAVQDQLSA 141

Query: 134 LSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVGNSVAFSLGLATTL 193
           LSFTSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFGSGK ++EVVGNSVAFSLGLATTL
Sbjct: 142 LSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTL 201

Query: 194 ALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSFFDNFDPRSAAANF 253
           A+LG+ ASFAGKAYGQ+GQGLP+AASGLAVIMGLNLLE+IELQLPSFF ++DPR+AAAN 
Sbjct: 202 AILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANL 261

Query: 254 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLTYTTGYVVPLLLAA 313
           PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+DP++GGSLLLTYTTGYV PLL+AA
Sbjct: 262 PSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAA 321

Query: 314 SFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVT 357
           SFAGALQSLLSFR++S+WINPISGA LLGGG+YT LDRLFP T
Sbjct: 322 SFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPAT 363

[Close]

BLAST of PI0017632 vs. ExPASy Swiss-Prot
Match: P51364 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=2787 PE=3 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-23
Identity = 70/237 (29.54%), Postives = 125/237 (52.74%), Query Frame = 0


Query: 116 LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSK 175
           LY++    N     QL+ ++  S + +F +G  TS SPC +S+LP+ + YI   G   S+
Sbjct: 7   LYNSQHLINNITLYQLNHINIASFSFVFFSGLFTSFSPCLISILPICIMYISGEGQKLSQ 66

Query: 176 AEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL 235
            + + N   F LG  ++   LG+ A+   K Y Q+  G+P+ ++ + + MG +LL I+ L
Sbjct: 67  IDKLKNLFFFCLGAISSFTTLGLIATLLAKTYSQLFNGIPVISALVIIYMGFSLLNIVPL 126

Query: 236 QLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGG 295
                 +N + R    N   +++ YL+G+   LA S CSTP+  TLL +V ++ +  IG 
Sbjct: 127 ST----NNLNTRINNTN--QNIKMYLSGVGIGLAISSCSTPIFVTLLIWVTSNHNLFIGL 186

Query: 296 SLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRL 353
             +L Y+ GY+ P+++ + F+    +  S    ++   P SG +LL  G ++    +
Sbjct: 187 IFILIYSIGYIFPIIIGSLFSSRFLTTASSPFLNNLWAPFSGTILLSAGTFSLFSSI 237

[Close]

BLAST of PI0017632 vs. ExPASy Swiss-Prot
Match: Q1XDC3 (Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=2788 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 9.0e-20
Identity = 65/208 (31.25%), Postives = 107/208 (51.44%), Query Frame = 0


Query: 115 FLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 174
           F+Y++    N     QL+ L+ TS + IF +G  TSLSPC +S+LP+ + YI       +
Sbjct: 6   FVYNSQHFVNNITLYQLNHLNSTSFSFIFLSGLFTSLSPCIISILPVCILYIAGETQKLN 65

Query: 175 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 234
                 N   F LG  ++   LGI A+   K Y Q   G+P  ++ + + MGLNLL I+ 
Sbjct: 66  PINKTKNLFLFCLGTISSFITLGILATLITKTYSQFFNGIPTISAVVIIYMGLNLLNIVH 125

Query: 235 LQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 294
           +  P F           N   + + YL+G+   +A S CSTP+  TLL ++ +++    G
Sbjct: 126 INSPKF------NGLVTNNNYNFKMYLSGVGIGIAISSCSTPIFVTLLVWINSTQKIFTG 185

Query: 295 GSLLLTYTTGYVVPLLLAASFAGALQSL 323
              +L Y+ GY+ P+++ + F+ +   L
Sbjct: 186 LIFILIYSIGYIFPIIIGSIFSTSFLKL 207

[Close]

BLAST of PI0017632 vs. ExPASy TrEMBL
Match: A0A5D3BU70 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00980 PE=3 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 9.2e-185
Identity = 347/359 (96.66%), Postives = 353/359 (98.33%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRN 60
           MS+LMSNSGGFI NSIKISTSKRL HPNTPGKYVMP+KFLGRQSAADDQCKDIELVENRN
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           SRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of PI0017632 vs. ExPASy TrEMBL
Match: A0A1S3BSW3 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493358 PE=3 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.7e-184
Identity = 346/359 (96.38%), Postives = 353/359 (98.33%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRN 60
           MS+LMSNSGGFI NSIKISTSKRL HPNTPGKYVMP+KFLGRQSAADDQC+DIELVENRN
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCEDIELVENRN 60

Query: 61  SRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           SRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of PI0017632 vs. ExPASy TrEMBL
Match: A0A0A0L5A0 (DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 SV=1)

HSP 1 Score: 629.4 bits (1622), Expect = 9.2e-177
Identity = 339/365 (92.88%), Postives = 347/365 (95.07%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTP------GKYVMPMKFLGRQSAADDQCKDIE 60
           MS L+SNSG FI NSI+ISTSK   HPNTP      GK+VMPMKFLG QS ADDQCK IE
Sbjct: 1   MSFLVSNSGAFIINSIQISTSK---HPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIE 60

Query: 61  LVENRNSRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGG 120
           LV+NRNSRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG
Sbjct: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 FLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
            LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300
           LQLPSFF+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP 360

[Close]

BLAST of PI0017632 vs. ExPASy TrEMBL
Match: A0A5A7TZQ7 (Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G00300 PE=3 SV=1)

HSP 1 Score: 629.0 bits (1621), Expect = 1.2e-176
Identity = 337/359 (93.87%), Postives = 345/359 (96.10%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRN 60
           MS+LMSNSGGFI NSIKISTSKRL HPNTPGKYVMP+KFLGRQSAADDQCKDIELVENRN
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           SRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYI  +    S  +VVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIVNWNI-SSYFQVVG 180

Query: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 358

[Close]

BLAST of PI0017632 vs. ExPASy TrEMBL
Match: A0A6J1JAT1 (cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima OX=3661 GN=LOC111483292 PE=3 SV=1)

HSP 1 Score: 602.4 bits (1552), Expect = 1.2e-168
Identity = 327/360 (90.83%), Postives = 338/360 (93.89%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDI-ELVENR 60
           M  LM++SGGF  NSIKISTSKRL     PGKYV P+ FLG QSAA DQ KDI E VE+ 
Sbjct: 1   MGFLMTHSGGFGINSIKISTSKRLL-GRPPGKYVAPLNFLGGQSAALDQTKDIDEFVEST 60

Query: 61  NSRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSA 120
           NS N F AM FVNAISATSFLAVDAAKAESL+HMWEGAASVYTLADGGIGDWFGGFLYSA
Sbjct: 61  NSSNHFHAMAFVNAISATSFLAVDAAKAESLEHMWEGAASVYTLADGGIGDWFGGFLYSA 120

Query: 121 GQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVV 180
           GQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+AEVV
Sbjct: 121 GQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVV 180

Query: 181 GNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPS 240
           GNSVAF+LGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPS
Sbjct: 181 GNSVAFALGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPS 240

Query: 241 FFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLL 300
           FFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP++GGSLLL
Sbjct: 241 FFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIVGGSLLL 300

Query: 301 TYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           TYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGG+Y+FLDRLFPVTMAM
Sbjct: 301 TYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYSFLDRLFPVTMAM 359

[Close]

BLAST of PI0017632 vs. NCBI nr
Match: TYK03271.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 656.0 bits (1691), Expect = 1.9e-184
Identity = 347/359 (96.66%), Postives = 353/359 (98.33%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRN 60
           MS+LMSNSGGFI NSIKISTSKRL HPNTPGKYVMP+KFLGRQSAADDQCKDIELVENRN
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCKDIELVENRN 60

Query: 61  SRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           SRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of PI0017632 vs. NCBI nr
Match: XP_008452288.1 (PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis melo])

HSP 1 Score: 654.4 bits (1687), Expect = 5.5e-184
Identity = 346/359 (96.38%), Postives = 353/359 (98.33%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRN 60
           MS+LMSNSGGFI NSIKISTSKRL HPNTPGKYVMP+KFLGRQSAADDQC+DIELVENRN
Sbjct: 1   MSILMSNSGGFIINSIKISTSKRLPHPNTPGKYVMPIKFLGRQSAADDQCEDIELVENRN 60

Query: 61  SRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           SRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLL GG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLSGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of PI0017632 vs. NCBI nr
Match: XP_011650559.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis sativus] >KGN56224.2 hypothetical protein Csa_010801 [Cucumis sativus])

HSP 1 Score: 636.0 bits (1639), Expect = 2.0e-178
Identity = 339/359 (94.43%), Postives = 347/359 (96.66%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRN 60
           MS L+SNSG FI NSI+ISTSK   HPNTPGK+VMPMKFLG QS ADDQCK IELV+NRN
Sbjct: 1   MSFLVSNSGAFIINSIQISTSK---HPNTPGKHVMPMKFLGTQSVADDQCKHIELVKNRN 60

Query: 61  SRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           SRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG LYSAG
Sbjct: 61  SRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGGILYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF
Sbjct: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           F+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IGGSLLLT
Sbjct: 241 FNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 356

[Close]

BLAST of PI0017632 vs. NCBI nr
Match: XP_038903027.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Benincasa hispida])

HSP 1 Score: 635.2 bits (1637), Expect = 3.5e-178
Identity = 336/359 (93.59%), Postives = 348/359 (96.94%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTPGKYVMPMKFLGRQSAADDQCKDIELVENRN 60
           MSLLMS+SGGF  NS KI +SKRLQ  +TPGKYVMP+KFLGRQSAADDQ KDIELVEN+N
Sbjct: 1   MSLLMSHSGGFSINSFKIKSSKRLQQSSTPGKYVMPIKFLGRQSAADDQSKDIELVENKN 60

Query: 61  SRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGGFLYSAG 120
           S N FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAA+VYTLADGGIGDWFGGFLYSAG
Sbjct: 61  SSNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAAAVYTLADGGIGDWFGGFLYSAG 120

Query: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSKAEVVG 180
           QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS+AEVVG
Sbjct: 121 QQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKSRAEVVG 180

Query: 181 NSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELQLPSF 240
           NSVAFSLGLATTLALLGI ASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIEL+LPSF
Sbjct: 181 NSVAFSLGLATTLALLGIAASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIELRLPSF 240

Query: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIGGSLLLT 300
           FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLAT+LGYVATSKDP+IGGSLLLT
Sbjct: 241 FDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATILGYVATSKDPIIGGSLLLT 300

Query: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFPVTMAM 360
           YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGG+YTFLDRLFPVTMAM
Sbjct: 301 YTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGVYTFLDRLFPVTMAM 359

[Close]

BLAST of PI0017632 vs. NCBI nr
Match: XP_004149294.1 (cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X3 [Cucumis sativus])

HSP 1 Score: 629.4 bits (1622), Expect = 1.9e-176
Identity = 339/365 (92.88%), Postives = 347/365 (95.07%), Query Frame = 0


Query: 1   MSLLMSNSGGFITNSIKISTSKRLQHPNTP------GKYVMPMKFLGRQSAADDQCKDIE 60
           MS L+SNSG FI NSI+ISTSK   HPNTP      GK+VMPMKFLG QS ADDQCK IE
Sbjct: 1   MSFLVSNSGAFIINSIQISTSK---HPNTPGSLVSLGKHVMPMKFLGTQSVADDQCKHIE 60

Query: 61  LVENRNSRNCFQAMTFVNAISATSFLAVDAAKAESLKHMWEGAASVYTLADGGIGDWFGG 120
           LV+NRNSRN FQAM FVNAISATSFLAVDAAKAE+LKHMWEGAASVYTLADGG+GDWFGG
Sbjct: 61  LVKNRNSRNYFQAMAFVNAISATSFLAVDAAKAETLKHMWEGAASVYTLADGGMGDWFGG 120

Query: 121 FLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180
            LYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS
Sbjct: 121 ILYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFGSGKS 180

Query: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240
           KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE
Sbjct: 181 KAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLLEIIE 240

Query: 241 LQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPVIG 300
           LQLPSFF+NFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDP+IG
Sbjct: 241 LQLPSFFNNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKDPIIG 300

Query: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP 360
           GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP
Sbjct: 301 GSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLDRLFP 360

[Close]

BLAST of PI0017632 vs. TAIR 10
Match: AT5G54290.1 (cytochrome c biogenesis protein family )

HSP 1 Score: 431.8 bits (1109), Expect = 5.4e-121
Identity = 238/310 (76.77%), Postives = 267/310 (86.13%), Query Frame = 0


Query: 52  DIELVENRNSRNCFQAMTFVNAISATSFLAVDAAKAESLKH-MWEGAASVYTLADGGIGD 111
           D   +E   S++   AM   + +   + + + +AKA  LK  + + A S+Y LA+G +GD
Sbjct: 46  DAVSLERLESKSIKLAM-LASGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGD 105

Query: 112 WFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG 171
             G FLYSA QQAN AVQDQLSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFG
Sbjct: 106 SVGNFLYSANQQANEAVQDQLSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG 165

Query: 172 SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL 231
           SGKS+ +V+G++VAF+LGLATTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLL
Sbjct: 166 SGKSRGQVIGDTVAFALGLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLL 225

Query: 232 EIIELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD 291
           EIIELQLPSFF+NFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+D
Sbjct: 226 EIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRD 285

Query: 292 PVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLD 351
           PVIGGSLLLTYTTGYV PL++AASFAGALQSLLS RK S+WINPISGALLLGGGLYTFLD
Sbjct: 286 PVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLD 345

Query: 352 RLFP-VTMAM 360
           RLFP  TM M
Sbjct: 346 RLFPAATMVM 354

[Close]

BLAST of PI0017632 vs. TAIR 10
Match: AT5G54290.2 (cytochrome c biogenesis protein family )

HSP 1 Score: 431.8 bits (1109), Expect = 5.4e-121
Identity = 238/310 (76.77%), Postives = 267/310 (86.13%), Query Frame = 0


Query: 52  DIELVENRNSRNCFQAMTFVNAISATSFLAVDAAKAESLKH-MWEGAASVYTLADGGIGD 111
           D   +E   S++   AM   + +   + + + +AKA  LK  + + A S+Y LA+G +GD
Sbjct: 47  DAVSLERLESKSIKLAM-LASGLGVANLVTLSSAKAADLKMIVLDQATSIYILAEGSLGD 106

Query: 112 WFGGFLYSAGQQANVAVQDQLSALSFTSLAVIFGAGFVTSLSPCTLSVLPLTLGYIGAFG 171
             G FLYSA QQAN AVQDQLSALS TSLAVIFGAG VTSLSPCTLSVLPLTLGYIGAFG
Sbjct: 107 SVGNFLYSANQQANEAVQDQLSALSVTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFG 166

Query: 172 SGKSKAEVVGNSVAFSLGLATTLALLGIGASFAGKAYGQIGQGLPLAASGLAVIMGLNLL 231
           SGKS+ +V+G++VAF+LGLATTLALLGI ASFAGKAYGQIGQGLP+AASGLA++MGLNLL
Sbjct: 167 SGKSRGQVIGDTVAFALGLATTLALLGIVASFAGKAYGQIGQGLPVAASGLAIVMGLNLL 226

Query: 232 EIIELQLPSFFDNFDPRSAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSKD 291
           EIIELQLPSFF+NFDPR+AAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATS+D
Sbjct: 227 EIIELQLPSFFNNFDPRAAAANFPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRD 286

Query: 292 PVIGGSLLLTYTTGYVVPLLLAASFAGALQSLLSFRKFSSWINPISGALLLGGGLYTFLD 351
           PVIGGSLLLTYTTGYV PL++AASFAGALQSLLS RK S+WINPISGALLLGGGLYTFLD
Sbjct: 287 PVIGGSLLLTYTTGYVAPLIVAASFAGALQSLLSLRKVSAWINPISGALLLGGGLYTFLD 346

Query: 352 RLFP-VTMAM 360
           RLFP  TM M
Sbjct: 347 RLFPAATMVM 355

The following BLAST results are available for this feature:

BLAST of PI0017632 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M5P3	7.6e-120	76.77	Cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Arabidopsis thal...	[more]
Q2QY07	1.3e-119	80.57	Cytochrome c-type biogenesis ccda-like chloroplastic protein 2 OS=Oryza sativa s...	[more]
Q2RAR6	1.7e-119	80.21	Cytochrome c-type biogenesis ccda-like chloroplastic protein 1 OS=Oryza sativa s...	[more]
P51364	3.0e-23	29.54	Putative cytochrome c-type biogenesis protein DbsD-like OS=Porphyra purpurea OX=...	[more]
Q1XDC3	9.0e-20	31.25	Putative cytochrome c-type biogenesis protein DbsD-like OS=Pyropia yezoensis OX=...	[more]

BLAST of PI0017632 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BU70	9.2e-185	96.66	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A1S3BSW3	2.7e-184	96.38	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A0A0L5A0	9.2e-177	92.88	DsbD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G099700 PE=3 S...	[more]
A0A5A7TZQ7	1.2e-176	93.87	Cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 OS=Cucum...	[more]
A0A6J1JAT1	1.2e-168	90.83	cytochrome c-type biogenesis ccda-like chloroplastic protein OS=Cucurbita maxima...	[more]

BLAST of PI0017632 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK03271.1	1.9e-184	96.66	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X1 [Cucumis...	[more]
XP_008452288.1	5.5e-184	96.38	PREDICTED: cytochrome c-type biogenesis ccda-like chloroplastic protein isoform ...	[more]
XP_011650559.1	2.0e-178	94.43	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X4 [Cucumis...	[more]
XP_038903027.1	3.5e-178	93.59	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X2 [Beninca...	[more]
XP_004149294.1	1.9e-176	92.88	cytochrome c-type biogenesis ccda-like chloroplastic protein isoform X3 [Cucumis...	[more]

BLAST of PI0017632 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G54290.1	5.4e-121	76.77	cytochrome c biogenesis protein family	[more]
AT5G54290.2	5.4e-121	76.77	cytochrome c biogenesis protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003834	Cytochrome C biogenesis protein, transmembrane domain	PFAM	PF02683	DsbD	coord: 142..349 e-value: 1.4E-44 score: 152.6
None	No IPR available	PANTHER	PTHR31272:SF6	CYTOCHROME C-TYPE BIOGENESIS CCDA-LIKE CHLOROPLASTIC PROTEIN	coord: 60..359
None	No IPR available	PANTHER	PTHR31272	CYTOCHROME C-TYPE BIOGENESIS PROTEIN HI_1454-RELATED	coord: 60..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017632.1	PI0017632.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0017004	cytochrome complex assembly
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane