PI0017341 (gene) Melon (PI 482460) v1

Overview
NamePI0017341
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr09: 19502186 .. 19503178 (-)
RNA-Seq ExpressionPI0017341
SyntenyPI0017341
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGACAATCGATGGAGAATCCGCGAAATGATGAAGGAAAATGGTCGAAAGATTTGGGGACTGGATGGTGAGAGCAAGAGAGAGAGCTGGGAATGGGGTCTAGGGTAAAGGTGTGTGCGAGGAGGAAATATATAGTCAAGGGTAAAACAAGAATACACAAATAATTAAAATTAAAATTTAATAACTTTGGCTACCCATTGCATTTTTTAAATGTAATTCGCATTTTTATAGTGGAAAAAAAAAGAGTTTAAACTCGCTTGCATATCTCCAAATTATCAATTGTCTACCAGGTTAAAAAAAATCTGCATAACTTTTTTAAAGTAATCATTTAATTGAGAGCACATTATTATAAATTTTATTAACGAATAATTAAGAAAAAGAATTAGAAAATTTATTCCAGTTGACACTCCTAAACCAGTTGTATCAATATTAATTCTAACTTGGAGGGCAATTGTTGGAGAATCGAGGGAGAGTTCTTTCAAAGAGGTTTGTTGCAGAGTGATTGAGAGGGCAATCGAAGAGTTGGAGGTTTTCTGCGTTGGGTTGTTGGTACATTTGGGGAGACCAAAATAAGCAAAGAATGGGGAGGTCGGTGAGGGATGTGGATCAAAGGGTTGCGACGGTGAGGGAGACGGACCAGACGGTGGAAAAGAGAGGGTTGGACCGATGGGTATGGGTGATGAGGTTTTGGGTTGTGGAGGTTGCCGAAGGAATGGGAAATTAAATGCAACGTTGATGCTTCGATTCTGGCAAATGGAAAAATGGGTTCGAGAGTCGTAATTCGTGATTCCCATGGTCAGATTATGAAAGCTTTAGTTGAGGCCAAGGATATGAAGGTTGATGTTCTTGCTGCAGAAGCTTTGGCTTTATTGATGGGGATTAAAGAGGTGTGTAAAATGGGGTTTTCCAACCCCATTTTCGAATCAGATTCGCTATCTTTAATTATCCATGCTTTACAACAAATCATGTGTTACTCTTCTATAGGAGTGA

mRNA sequence

ATGGCTGACAATCGATGGAGAATCCGCGAAATGATGAAGGAAAATGGTCGAAAGATTTGGGGACTGGATGGTGAGAGCAAGAGAGAGAGCTGGGAATGGGGTCTAGGGTTGCCGAAGGAATGGGAAATTAAATGCAACGTTGATGCTTCGATTCTGGCAAATGGAAAAATGGGTTCGAGAGTCGTAATTCGTGATTCCCATGGTCAGATTATGAAAGCTTTAGTTGAGGCCAAGGATATGAAGGTTGATGTTCTTGCTGCAGAAGCTTTGGCTTTATTGATGGGGATTAAAGAGGAGTGA

Coding sequence (CDS)

ATGGCTGACAATCGATGGAGAATCCGCGAAATGATGAAGGAAAATGGTCGAAAGATTTGGGGACTGGATGGTGAGAGCAAGAGAGAGAGCTGGGAATGGGGTCTAGGGTTGCCGAAGGAATGGGAAATTAAATGCAACGTTGATGCTTCGATTCTGGCAAATGGAAAAATGGGTTCGAGAGTCGTAATTCGTGATTCCCATGGTCAGATTATGAAAGCTTTAGTTGAGGCCAAGGATATGAAGGTTGATGTTCTTGCTGCAGAAGCTTTGGCTTTATTGATGGGGATTAAAGAGGAGTGA

Protein sequence

MADNRWRIREMMKENGRKIWGLDGESKRESWEWGLGLPKEWEIKCNVDASILANGKMGSRVVIRDSHGQIMKALVEAKDMKVDVLAAEALALLMGIKEE
Homology
The following BLAST results are available for this feature:
BLAST of PI0017341 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017341 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017341 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017341 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 54..97
e-value: 2.3E-5
score: 24.2

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017341.1PI0017341.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity