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PI0017336 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCTTCATTCTTCACATAATTTTAAGAGACCCCATCGTCGAAACTTTTCGATTCAAAGCAAACCTTGTCGTTTTTGGACCTACACAATTAACCCCATTTACTCGATTTTGTTCTGTAAGTCTCGGATTTCCCTTAACAATGATCTCTTGTTAGATTATTTGCTGATCCCTTTTCTCTTATACCTTCTGTGTCTTCGTGTTCGGTTTCTGGGGTTCTTTAATTGTGTCTGATTGTTTTATCCTTTGAATTTCACTTGTTTAACTGTCATCGAAGCTTATAGTTATACGGCTGTAGAATTGTTGTGTTGTCTGATTCTGTTTATCGTTTGATGTTTTCGCTACATTTCATTATCTGTGGGACTTGGCTGTGAATGTCAACAATTGGGGATTTAGATGAAAAGAATTCGAATCTGATCTGGTACCCAGAAGTTCTGATTTCGAAGTTGACAATTTGCATTTTAGTGGAGACCTCAATCTTTTAAATATTGGATATCTGTATGCACTTGGAGTTTGAGCGCATTCATCTTACACTTCTTTGGTTCCTTTGGATGCCCAAATGATGGGAAAATGTCTTGGGTACTTCTGGATGTCTTTTCACTTTTCAGACAATGCTGTTCCTTTCCTTGAGCGTTTTCGGGTTTAGATTTCTTGTTTTTTATGTTGTCTGAAGGAATCAATGAATGTGAGTTATCTAATCTGTATGACGCAGATGATCAGCTCATGAATGAGGCTTAGGCATTGAATTTGACAACTAAGTAATGATTAATTGGGAATTCCATGCTCTTCTTGTTGAATTACACATGTGATGGATGTACCATATATGAACATGTCAATACTTACAAGAACTTCAAACTCTTTGAAATTATTTATGATTATATTTTTGTTATATAGGTGGTCTATTGTGTAGCCATGGACATTACATTTACACATTTATATAGTTAAAGGAACGTCAAAGTTTAGGCTATCATGAGTCTTTGATTCTTTAAACTTCACTTCTTATGTTACTTGTTCGTTGAATAATCCATCGGGGCTGAAAATGATGAATGATGTGTTAGTGTAGTAAGGATATGTGGGGTTGTTTGTCCAGTAAGATAATGGAGCCTCTTTCTCTACAAGTTCTGCAGATCATTGCTATAAATTCATAAGACTTTCATTCTGTAGGTTCATATTACTCTCAAATCAACTAGCTTTTGCAACTATTGCAGACATGAGTTTTGTTTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCCGAAAGGCGGGCAATGGTATGCTAAATATTTTGTATTATTGACCTGTTAATACCAATGCTTGGAAATTTAGATATAGCACTAGTTATGATTCTAATTTTATTTTTTATTTTTTTGCTCACAATCAGCGGGTTCATGCAGCACGTCCTGTTAACTCAAATTCACTTGCCTTTCTTGTCACAGGTACTATTTCACCTATGTACAGACTAATATCTGTTTCATGTGATAATTTTGATCAATTGCATTTTTTAACTCCTTGACTTTTGTTGCAGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCGAACTTTCTGGTAAGTTTCATATTCCACATTGTGAATAAGTAGAATATTGATCTTACTCTCTCACCCTTGATATGAATCTTTACACTTTCTTGCTTTGAACATGCATATTTAGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTATGCAACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTCGACGATCTAGGTATGGTTCAAATTTAACAAGTGCAAGTTTGTATCTTCAAATTTAGTCAAACATGGCCACCATTCTTTTCCATTCTCAGTGTATTGCTTTCACCTATTTTTCAGCAACATTTTTCAGTGGCACAAACTCTCTTGTGTGTGTATGCATATGTGGTAAAATTTGGGGAAACTTTATCAATCGGATTTATTTGACAAGATTCTCAAATGTAATCATTTTGATGTGGGTTTCTGAAAAAGCAAGAAATTCACTTCTTCGGGCAATTCTTTTTTGTTGATCAGACTTCTTTGGCACGGTTCTGACATGATAAGCTTGTGGTAAATGCATGAAGTCAAATAGGATAGAAGTAGTGATTTTTATGAAACTTTAAACTAGCTGAACTTGCTGAATTTGTCATCAAGTGTTGAAAAGAAAGTATCTTGAACTTGCTTCAGATAGTATGGTTGGGATGGACATGACTTCATGAAACTTCAAATTTGTTGGATTTCTTTTTCTGATTTCTAACTTTTTTTAAAGCCTGTCATTGTGTCTTTTAAATTTCATATCTATATATATATTCTCGATTATGCATATTAAGTATATCATTTATCTTCAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGGTGTGATCAATGTGATATTAGTTTACAATCCAGAATGACTTCTGTTGCTTTATTTCAAGTTTACATTCCAGAATGACTTCTGTTGCTTTATTTTAAGTCTACATACTCTTTACTGAGACTTTTCAACGATGAAATATGTTTACTCCAGCTTGTCACCAAAAAACTAAAATTGATTTCATTTTTCATTAAATTATCTGCAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTAATGAGGTATCTAAATAGGTTTACTTTTTTCCTTACATATTTGATTCTTTTTTTTGCTTTAAACGGTGTGTACAAAATTACAAAATTACAAATACAATAATTGCTCGTTTTAGAAGGAAATATAGTTCTGAAAAGAGACGGCCAAAATTTTCCTGTTTTTTAGCCTTATTATTTGTATACCACACACTCTTCTCATCAGGTATCAATTCTCGAGTACGTACTGTTTTTTAATTTTGATTGCAGAAGAAACAAGATTCAGTTAATGCAGTTGGCAGTACCAAGACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGGTTAATCCTCATCTCTATGCCAGTCTCCTTTCCTTCCAAACAAATGGTTACTATTATTTCATGTTGAAAATTCAGGAATTTGGTTTCTTGTTATTATTACGTATCGTGGTTGTTTCCTTTTGTTTGTCTTCTTTGGAGGCTTCTGTTCTGCTGTTGCAGTCCCTTTTTCTTTAAGTTTTGATACATCTTCTACCTGCTGGTATTCCAAGAGTTCTTTTAATTTGAATTGAATCTTGTAGTTCCATGCCAACTGCATAGATCCGTGGCTGCGACAGCAGGGAACGTGCCCCGTCTGTAAATTCAGAGCAGTATCTGGGTGGTCAGAACAGGGGCAAGGCGAAACCGATGCTTATATGGTTTAGTTGTGGATGCAAAGCAAGTTATCAAACAACGCTTGATGCCTTATTAAAAAAAGCAAAGGATATGGACAGACATGGTGTAATTAGGTTTAGGGTAGGCATTACAGGAATTGGAGTTGCCGTTTTGTATCTCTTTGGACTTATGACGAGCCATTTAATTGTATTCTTGAAGTTGATCATTTGTGATATAGAGTCTCTGACCACTGTAAGTGAGAAGAATTTTGTTCTTTCACTGTCTTCAATGTATTATCCCAACCCTTACTAGCAAGTACTTGTTATCTCTATAACTAAACACCAAAAAGAAAATCATTTGACGGTAAAAAAGGGTCCTTT CCTTCATTCTTCACATAATTTTAAGAGACCCCATCGTCGAAACTTTTCGATTCAAAGCAAACCTTGTCGTTTTTGGACCTACACAATTAACCCCATTTACTCGATTTTGTTCTGTTCATATTACTCTCAAATCAACTAGCTTTTGCAACTATTGCAGACATGAGTTTTGTTTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCCGAAAGGCGGGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCAAATTCACTTGCCTTTCTTGTCACAGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCGAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTATGCAACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTCGACGATCTAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTAATGAGAAGAAACAAGATTCAGTTAATGCAGTTGGCAGTACCAAGACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGGTTAATCCTCATCTCTATGCCAGTCTCCTTTCCTTCCAAACAAATGGTTACTATTATTTCATGTTGAAAATTCAGGAATTTGGTTTCTTGTTATTATTACGTATCGTGGTTGTTTCCTTTTGTTTGTCTTCTTTGGAGGCTTCTGTTCTGCTGTTGCAGTCCCTTTTTCTTTAAGTTTTGATACATCTTCTACCTGCTGGTATTCCAAGAGTTCTTTTAATTTGAATTGAATCTTGTAGTTCCATGCCAACTGCATAGATCCGTGGCTGCGACAGCAGGGAACGTGCCCCGTCTGTAAATTCAGAGCAGTATCTGGGTGGTCAGAACAGGGGCAAGGCGAAACCGATGCTTATATGGTTTAGTTGTGGATGCAAAGCAAGTTATCAAACAACGCTTGATGCCTTATTAAAAAAAGCAAAGGATATGGACAGACATGGTGTAATTAGGTTTAGGGTAGGCATTACAGGAATTGGAGTTGCCGTTTTGTATCTCTTTGGACTTATGACGAGCCATTTAATTGTATTCTTGAAGTTGATCATTTGTGATATAGAGTCTCTGACCACTGTAAGTGAGAAGAATTTTGTTCTTTCACTGTCTTCAATGTATTATCCCAACCCTTACTAGCAAGTACTTGTTATCTCTATAACTAAACACCAAAAAGAAAATCATTTGACGGTAAAAAAGGGTCCTTT ATGAGTTTTGTTTTCCGTGGAACGAGAGTTCCAGACATTGAAAATGGTCTATCTGGATTTATACCCGAAAGGCGGGCAATGCGGGTTCATGCAGCACGTCCTGTTAACTCAAATTCACTTGCCTTTCTTGTCACAGTCCTTTTGCTATTCATGATATTAAACTCTCACCAGATGTCACCGAACTTTCTGCTCTGGCTTGTGCTTGGTGTCTTTTTGATGGCTACAACATTAAGGATGTATGCAACTTGTCAACAACTTCAGGCTCAAGCCCAAGCTAGAGCTATGGCAGCCAGTGGTCTTCTTGGTCACACTGAATTAAGGTTACATATGCCACCATCAATAGCACTTGCAACTAGAGGGCGTTTACAAGGGCTAAGGCTTCAACTTGCTCTGCTAGATCGGGAATTCGACGATCTAGATTATGAAACTTTGAGAGCTTTGGATTCTGACAATGCTCCGACAACACCTTCTATGAGTGAGGAACAAATAAATGCTCTTCCCGTTCATAAATACAAGGTTTCTGGTCCTCAAAGCGACTCCTCTGTGAATCAGCAGGCTTCATCTTCAGAATCTAATGAGAAGAAACAAGATTCAGTTAATGCAGTTGGCAGTACCAAGACCTCTGAGGATGAACTCACATGCAGTGTTTGCTTGGAGCAAGTAAATGTTGGTGAACTCATACGTAGTTTGCCATGTTTACATCAGGTTAATCCTCATCTCTATGCCAGTCTCCTTTCCTTCCAAACAAATGGTTACTATTATTTCATGTTGAAAATTCAGGAATTTGGTTTCTTGTTATTATTACGTATCGTGGTTGTTTCCTTTTGTTTGTCTTCTTTGGAGGCTTCTGTTCTGCTGTTGCAGTCCCTTTTTCTTTAA MSFVFRGTRVPDIENGLSGFIPERRAMRVHAARPVNSNSLAFLVTVLLLFMILNSHQMSPNFLLWLVLGVFLMATTLRMYATCQQLQAQAQARAMAASGLLGHTELRLHMPPSIALATRGRLQGLRLQLALLDREFDDLDYETLRALDSDNAPTTPSMSEEQINALPVHKYKVSGPQSDSSVNQQASSSESNEKKQDSVNAVGSTKTSEDELTCSVCLEQVNVGELIRSLPCLHQVNPHLYASLLSFQTNGYYYFMLKIQEFGFLLLLRIVVVSFCLSSLEASVLLLQSLFL Homology
BLAST of PI0017336 vs. ExPASy Swiss-Prot
Match: Q9M2S6 (E3 ubiquitin-protein ligase SDIR1 OS=Arabidopsis thaliana OX=3702 GN=SDIR1 PE=1 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 2.2e-93 Identity = 191/236 (80.93%), Postives = 207/236 (87.71%), Query Frame = 0
BLAST of PI0017336 vs. ExPASy TrEMBL
Match: A0A5A7UN38 (E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00660 PE=4 SV=1) HSP 1 Score: 444.1 bits (1141), Expect = 4.4e-121 Identity = 234/236 (99.15%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of PI0017336 vs. ExPASy TrEMBL
Match: E5GC70 (Protein binding protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 9.9e-121 Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of PI0017336 vs. ExPASy TrEMBL
Match: A0A1S3B3A3 (E3 ubiquitin-protein ligase SDIR1 OS=Cucumis melo OX=3656 GN=LOC103485511 PE=4 SV=1) HSP 1 Score: 443.0 bits (1138), Expect = 9.9e-121 Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of PI0017336 vs. ExPASy TrEMBL
Match: A0A0A0KBF9 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G008630 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 1.1e-119 Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of PI0017336 vs. ExPASy TrEMBL
Match: A0A6J1FER7 (E3 ubiquitin-protein ligase SDIR1 OS=Cucurbita moschata OX=3662 GN=LOC111444825 PE=4 SV=1) HSP 1 Score: 436.0 bits (1120), Expect = 1.2e-118 Identity = 229/235 (97.45%), Postives = 232/235 (98.72%), Query Frame = 0
BLAST of PI0017336 vs. NCBI nr
Match: KAA0056614.1 (E3 ubiquitin-protein ligase SDIR1 [Cucumis melo var. makuwa] >TYK24298.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis melo var. makuwa]) HSP 1 Score: 444.1 bits (1141), Expect = 9.2e-121 Identity = 234/236 (99.15%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of PI0017336 vs. NCBI nr
Match: XP_008441380.1 (PREDICTED: E3 ubiquitin-protein ligase SDIR1 [Cucumis melo] >ADN34069.1 protein binding protein [Cucumis melo subsp. melo]) HSP 1 Score: 443.0 bits (1138), Expect = 2.0e-120 Identity = 234/235 (99.57%), Postives = 235/235 (100.00%), Query Frame = 0
BLAST of PI0017336 vs. NCBI nr
Match: XP_004138475.1 (E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_011656385.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus] >XP_031743514.1 E3 ubiquitin-protein ligase SDIR1 [Cucumis sativus]) HSP 1 Score: 439.5 bits (1129), Expect = 2.3e-119 Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of PI0017336 vs. NCBI nr
Match: KGN45732.1 (hypothetical protein Csa_005578 [Cucumis sativus]) HSP 1 Score: 439.5 bits (1129), Expect = 2.3e-119 Identity = 233/235 (99.15%), Postives = 234/235 (99.57%), Query Frame = 0
BLAST of PI0017336 vs. NCBI nr
Match: XP_023551037.1 (E3 ubiquitin-protein ligase SDIR1 [Cucurbita pepo subsp. pepo] >XP_023551039.1 E3 ubiquitin-protein ligase SDIR1 [Cucurbita pepo subsp. pepo] >XP_023551040.1 E3 ubiquitin-protein ligase SDIR1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 438.0 bits (1125), Expect = 6.6e-119 Identity = 230/235 (97.87%), Postives = 233/235 (99.15%), Query Frame = 0
BLAST of PI0017336 vs. TAIR 10
Match: AT3G55530.1 (RING/U-box superfamily protein ) HSP 1 Score: 343.6 bits (880), Expect = 1.6e-94 Identity = 191/236 (80.93%), Postives = 207/236 (87.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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