PI0017328 (gene) Melon (PI 482460) v1

Overview
NamePI0017328
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr11: 4404272 .. 4405336 (-)
RNA-Seq ExpressionPI0017328
SyntenyPI0017328
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTCTGCAAAAATATTTACAAATAGACAACAAACTAATTTTAGCATTCAATTTTCTAAATTTAACAAATAATCAAAATCCTATAAAGAGACCAATTTTCTCTTCTCCTCAAGCAATCATCCTCTCGCCAAAAATAAAAAGAAACACTGCAAACTTAAGGTGTAAGAAAAAAAAGGGGAAAAAACCTTTAAAATAAAATGGCGAAGAAGATGATGGCAGTGTTTCTATTGTGCATTCTGGTGGTTGCTGCACTGGAAATCTCCACCATTGCCGCCAGCGAGGAGGCGAACAATATCCCGAGGAAAAAGTCATTGTTTGGCCACATCTTCGGTAAGTTGTATCAATTTTTATTCTAAACTTTTAGAAAGGTAACTTAAAAACAACATGATTTTCGTCGTTGTTATTATTATTTTGTGTTAAACAACATATAAATTTTAGATCAAATAGATCCGTTTTTCATTTTAAAAAATGAAGTTGGTGTTGATTCTTTTAAAAAAATTGATAGATTGTAACAAAGTTATTCAATAGTCGATTTTGTGCTCGTTTCAAATTTAATATTATCCCAAACAAAGGTTTTTTCTCTTTTTCTCTTTTTTTAGTTAGTGTAAAAGATTATTATGAACAAAAAAAAATGCCTTGATTTTGCATATTTCTTGATTGATTATTGATTTATTTTTGTTGTGTGTGTGTGTGTGTTTTTTTCAGATAAATTCCACATCAATATGCCCCATTGAAAATTGAGGATAAAATGAAAGAAGAGCTCTCAAGAATACTGATGGGATTGATGTAAATGGTGATTTATTTTGAATGATTTTTTTCCTTTATGAGAGGAATTTCTGAGCCTCCTTTTTCCTCCTTTGTAATCTCTTTGTTTCAGTAATAATAATCTTAAAAGAAAAAAGTTGGGTTTCTGTCTTTTTGGTAATGTTTGTGTGTGTGTGTGTTTTTTTTTCCACGATTGTTCTTAGACCAACAAAATTCATTTGATTTATTTATGAAGATCGAAAATATTCAACTTTTGGATATGAAAAAATTGGGAACACACATATATGAAATTAAAAATA

mRNA sequence

TTATTCTGCAAAAATATTTACAAATAGACAACAAACTAATTTTAGCATTCAATTTTCTAAATTTAACAAATAATCAAAATCCTATAAAGAGACCAATTTTCTCTTCTCCTCAAGCAATCATCCTCTCGCCAAAAATAAAAAGAAACACTGCAAACTTAAGGTGTAAGAAAAAAAAGGGGAAAAAACCTTTAAAATAAAATGGCGAAGAAGATGATGGCAGTGTTTCTATTGTGCATTCTGGTGGTTGCTGCACTGGAAATCTCCACCATTGCCGCCAGCGAGGAGGCGAACAATATCCCGAGGAAAAAGTCATTGTTTGGCCACATCTTCGATAAATTCCACATCAATATGCCCCATTGAAAATTGAGGATAAAATGAAAGAAGAGCTCTCAAGAATACTGATGGGATTGATGTAAATGGTGATTTATTTTGAATGATTTTTTTCCTTTATGAGAGGAATTTCTGAGCCTCCTTTTTCCTCCTTTGTAATCTCTTTGTTTCAGTAATAATAATCTTAAAAGAAAAAAGTTGGGTTTCTGTCTTTTTGGTAATGTTTGTGTGTGTGTGTGTTTTTTTTTCCACGATTGTTCTTAGACCAACAAAATTCATTTGATTTATTTATGAAGATCGAAAATATTCAACTTTTGGATATGAAAAAATTGGGAACACACATATATGAAATTAAAAATA

Coding sequence (CDS)

ATGGCGAAGAAGATGATGGCAGTGTTTCTATTGTGCATTCTGGTGGTTGCTGCACTGGAAATCTCCACCATTGCCGCCAGCGAGGAGGCGAACAATATCCCGAGGAAAAAGTCATTGTTTGGCCACATCTTCGATAAATTCCACATCAATATGCCCCATTGA

Protein sequence

MAKKMMAVFLLCILVVAALEISTIAASEEANNIPRKKSLFGHIFDKFHINMPH
Homology
[Close]
BLAST of PI0017328 vs. ExPASy TrEMBL
Match: A0A0A0KFK4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.0e-12
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1  MAKKMMAVFLLCILVVAALEISTIAASEEANNIPRKKSLFGHIFDKFHINMP 53
          M KKMMAVFLLCILV+AALEIS +AA EEANNIPRKKSLF  IFDK  ++MP
Sbjct: 1  MTKKMMAVFLLCILVLAALEISAVAAGEEANNIPRKKSLFSRIFDKLGVDMP 52

[Close]
BLAST of PI0017328 vs. NCBI nr
Match: KGN47207.1 (hypothetical protein Csa_020977 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 8.3e-12
Identity = 41/52 (78.85%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1  MAKKMMAVFLLCILVVAALEISTIAASEEANNIPRKKSLFGHIFDKFHINMP 53
          M KKMMAVFLLCILV+AALEIS +AA EEANNIPRKKSLF  IFDK  ++MP
Sbjct: 1  MTKKMMAVFLLCILVLAALEISAVAAGEEANNIPRKKSLFSRIFDKLGVDMP 52

The following BLAST results are available for this feature:
BLAST of PI0017328 vs.
Match NameE-valueIdentityDescription
BLAST of PI0017328 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFK44.0e-1278.85Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G200320 PE=4 SV=1[more]
BLAST of PI0017328 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47207.18.3e-1278.85hypothetical protein Csa_020977 [Cucumis sativus][more]
BLAST of PI0017328 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017328.1PI0017328.1mRNA