PI0017324 (gene) Melon (PI 482460) v1

Overview
NamePI0017324
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr04: 1229442 .. 1230309 (-)
RNA-Seq ExpressionPI0017324
SyntenyPI0017324
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGAAACTCTTCCAAATCCCCGAGCACCCAATTATTTAGGCGTTTTTTAAAAATAAAATTATTTAGGCATTTTCCTTACCATTTTCCTTTTTCTTTAATATCGAACAGTGTTTAAAATATTGATATTGACTCGTAGGCCTCAAGCAAATGCCCCAACCTCCCACTTCCTCCTCTGTATAAATAAACAACCGTATTCAAACCGAGTCCATACCGAGTTTAAGAGAGAGAAAAACAGAAAGAGAGATTTTAGAGAGAGAACGGATGGATGATGCAATTGATAGGAAGAAGACGAAGACGAAGAAGAGGAGAGTATTCAGTTTCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGAGATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTGGTAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCGGTTGCCGCTTTTGATTCGATATTCGTATGTGCTTTGAAATTAACCGAATTCTGTATGTATTTGTTAATTTGTTATAAAAATTTCATTCCTCTTCAGTATTTTTTTTCAAGTCATTTTCAATTAATTCTCTTTTTTAATTGCGTTGATCTCTGTGGCTTTGACATCTGTGACGACTGACGAACTCGTTAATTAATCAAGCAAAACTCTTGAGTTTTCCAATTGAATTCATTAGTTATAACATTGCATTGAAGAAGTTTGTTGGTCTGAACGATATGAATTCGGTAAGAATTTAGGAGATGTTGAACATAATTTTTCATGAGAATGAGAGAGATGAATAAATTAGGTTAGAATATTGTTAAGTGAGACGGAGTTGGTCATCG

mRNA sequence

CAAGAAACTCTTCCAAATCCCCGAGCACCCAATTATTTAGGCGTTTTTTAAAAATAAAATTATTTAGGCATTTTCCTTACCATTTTCCTTTTTCTTTAATATCGAACAGTGTTTAAAATATTGATATTGACTCGTAGGCCTCAAGCAAATGCCCCAACCTCCCACTTCCTCCTCTGTATAAATAAACAACCGTATTCAAACCGAGTCCATACCGAGTTTAAGAGAGAGAAAAACAGAAAGAGAGATTTTAGAGAGAGAACGGATGGATGATGCAATTGATAGGAAGAAGACGAAGACGAAGAAGAGGAGAGTATTCAGTTTCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGAGATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTGGTAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCGGTTGCCGCTTTTGATTCGATATTCGTATGTGCTTTGAAATTAACCGAATTCTGTATGTATTTGTTAATTTGTTATAAAAATTTCATTCCTCTTCAGTATTTTTTTTCAAGTCATTTTCAATTAATTCTCTTTTTTAATTGCGTTGATCTCTGTGGCTTTGACATCTGTGACGACTGACGAACTCGTTAATTAATCAAGCAAAACTCTTGAGTTTTCCAATTGAATTCATTAGTTATAACATTGCATTGAAGAAGTTTGTTGGTCTGAACGATATGAATTCGGTAAGAATTTAGGAGATGTTGAACATAATTTTTCATGAGAATGAGAGAGATGAATAAATTAGGTTAGAATATTGTTAAGTGAGACGGAGTTGGTCATCG

Coding sequence (CDS)

ATGGATGATGCAATTGATAGGAAGAAGACGAAGACGAAGAAGAGGAGAGTATTCAGTTTCCAGAGGCTAAGAGATTCGTGGAAGTGGAAATTTCTTAGAGATTTCAAGTGGAAGAGATTGAATCTCCAGATCGGTTTCTTTGATGCTATAATTTTCCGAATCGTTTCTCTGTTTGAGGCCATTGCGTTGGTAGGCATCGCCGGCTTCTTCTTCCTCTGTTGTGGCGGTTGCCGCTTTTGA

Protein sequence

MDDAIDRKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGFFFLCCGGCRF
Homology
BLAST of PI0017324 vs. ExPASy TrEMBL
Match: A0A0A0KLX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522750 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.0e-32
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 0

Query: 1  MDDAIDRKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEA 60
          MDDAIDRKKTKT K+RVFSFQRLRDSWKWKFL++FKWKRLNLQ+GFFDAIIFRIVSLFE 
Sbjct: 1  MDDAIDRKKTKTMKKRVFSFQRLRDSWKWKFLKNFKWKRLNLQMGFFDAIIFRIVSLFET 60

Query: 61 IALVGIAGFFFLCCGGCRF 80
          +ALVGIA FFFLCCGGCRF
Sbjct: 61 VALVGIASFFFLCCGGCRF 79

BLAST of PI0017324 vs. ExPASy TrEMBL
Match: A0A7N2LSF8 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.3e-10
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0

Query: 13 KKRRVFSFQRLR--DSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGF 72
          KK R   F+RLR   +W+WKFL   FKWKRLNLQ+ F D ++FRI+S+FEAI LV    F
Sbjct: 4  KKNRWIFFKRLRMQTAWRWKFLGSAFKWKRLNLQLSFVDDVLFRILSVFEAIVLVATLCF 63

Query: 73 FFLCCGGCRF 80
          F+LCC GC F
Sbjct: 64 FYLCC-GCHF 72

BLAST of PI0017324 vs. ExPASy TrEMBL
Match: A0A067GHI9 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036027mg PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.5e-10
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0

Query: 11 KTKKRRVFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 70
          K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A 
Sbjct: 17 KRLNRRWVLFKRLIKRESLRWKFLG--KWKRLNLQISFFDDVLFKIVSVFEAVVLVATAC 76

Query: 71 FFFLCCGGCRF 80
          FFFLCC GC F
Sbjct: 77 FFFLCC-GCHF 84

BLAST of PI0017324 vs. ExPASy TrEMBL
Match: V4UFE9 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017350mg PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.5e-10
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0

Query: 11 KTKKRRVFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 70
          K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A 
Sbjct: 15 KRLNRRWVLFKRLIKRESLRWKFLG--KWKRLNLQISFFDDVLFKIVSVFEAVVLVATAC 74

Query: 71 FFFLCCGGCRF 80
          FFFLCC GC F
Sbjct: 75 FFFLCC-GCHF 82

BLAST of PI0017324 vs. ExPASy TrEMBL
Match: A0A1R3FVP9 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.1e-09
Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 0

Query: 10 TKTKKRRVFSFQRLRDSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 69
          + + KR V   + +++SW+WKFL   FKWKRLN+Q+ FFD ++FRI S+ EAI LV    
Sbjct: 8  SSSSKRWVLFKRLIKESWRWKFLGSAFKWKRLNIQLSFFDDVLFRIASVLEAIYLVATLC 67

Query: 70 FFFLCCGGCRF 80
          FF+LCC GC F
Sbjct: 68 FFYLCC-GCHF 77

BLAST of PI0017324 vs. NCBI nr
Match: KGN49382.1 (hypothetical protein Csa_004198 [Cucumis sativus])

HSP 1 Score: 147.1 bits (370), Expect = 6.3e-32
Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 0

Query: 1  MDDAIDRKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEA 60
          MDDAIDRKKTKT K+RVFSFQRLRDSWKWKFL++FKWKRLNLQ+GFFDAIIFRIVSLFE 
Sbjct: 1  MDDAIDRKKTKTMKKRVFSFQRLRDSWKWKFLKNFKWKRLNLQMGFFDAIIFRIVSLFET 60

Query: 61 IALVGIAGFFFLCCGGCRF 80
          +ALVGIA FFFLCCGGCRF
Sbjct: 61 VALVGIASFFFLCCGGCRF 79

BLAST of PI0017324 vs. NCBI nr
Match: KAG7034699.1 (hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.4 bits (350), Expect = 1.3e-29
Identity = 70/79 (88.61%), Postives = 72/79 (91.14%), Query Frame = 0

Query: 1  MDDAIDRKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEA 60
          MDDAIDRK  KTKKRR FS QRLRDSWKWKFL+DFKWKRLNL IGF DAIIFRI SLFEA
Sbjct: 1  MDDAIDRK--KTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEA 60

Query: 61 IALVGIAGFFFLCCGGCRF 80
          IAL+GIAGFFFLCCGGCRF
Sbjct: 61 IALIGIAGFFFLCCGGCRF 77

BLAST of PI0017324 vs. NCBI nr
Match: KAG6581417.1 (hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 117.9 bits (294), Expect = 4.1e-23
Identity = 61/70 (87.14%), Postives = 63/70 (90.00%), Query Frame = 0

Query: 1  MDDAIDRKKTKTKKRRVFSFQRLRDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEA 60
          MDDAIDRK  KTKKRR FS QRLRDSWKWKFL+DFKWKRLNL IGF DAIIFRI SLFEA
Sbjct: 1  MDDAIDRK--KTKKRRAFSIQRLRDSWKWKFLKDFKWKRLNLHIGFLDAIIFRIASLFEA 60

Query: 61 IALVGIAGFF 71
          IAL+GIAGFF
Sbjct: 61 IALIGIAGFF 68

BLAST of PI0017324 vs. NCBI nr
Match: XP_030972441.1 (uncharacterized protein LOC115992393 [Quercus lobata])

HSP 1 Score: 73.6 bits (179), Expect = 8.8e-10
Identity = 41/70 (58.57%), Postives = 50/70 (71.43%), Query Frame = 0

Query: 13 KKRRVFSFQRLR--DSWKWKFLRD-FKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGF 72
          KK R   F+RLR   +W+WKFL   FKWKRLNLQ+ F D ++FRI+S+FEAI LV    F
Sbjct: 4  KKNRWIFFKRLRMQTAWRWKFLGSAFKWKRLNLQLSFVDDVLFRILSVFEAIVLVATLCF 63

Query: 73 FFLCCGGCRF 80
          F+LCC GC F
Sbjct: 64 FYLCC-GCHF 72

BLAST of PI0017324 vs. NCBI nr
Match: ESR62900.1 (hypothetical protein CICLE_v10017350mg [Citrus clementina])

HSP 1 Score: 72.4 bits (176), Expect = 2.0e-09
Identity = 43/71 (60.56%), Postives = 51/71 (71.83%), Query Frame = 0

Query: 11 KTKKRRVFSFQRL--RDSWKWKFLRDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAG 70
          K   RR   F+RL  R+S +WKFL   KWKRLNLQI FFD ++F+IVS+FEA+ LV  A 
Sbjct: 15 KRLNRRWVLFKRLIKRESLRWKFLG--KWKRLNLQISFFDDVLFKIVSVFEAVVLVATAC 74

Query: 71 FFFLCCGGCRF 80
          FFFLCC GC F
Sbjct: 75 FFFLCC-GCHF 82

BLAST of PI0017324 vs. TAIR 10
Match: AT5G46295.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G06475.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 2.8e-06
Identity = 28/70 (40.00%), Postives = 45/70 (64.29%), Query Frame = 0

Query: 13 KKRRVFSFQRLRDSWKWKFL---RDFKWKRLNLQIGFFDAIIFRIVSLFEAIALVGIAGF 72
          +K ++  ++  ++  + KFL      KWKRLNL++ F + + +RI+S+ EA+ LV    F
Sbjct: 3  RKGKLSIWKTTKERTRLKFLGLGGGLKWKRLNLKMTFLETLRYRIMSIIEAMVLVSKLAF 62

Query: 73 FFLCCGGCRF 80
          FFLCC GC+F
Sbjct: 63 FFLCC-GCKF 71

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLX93.0e-3289.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G522750 PE=4 SV=1[more]
A0A7N2LSF84.3e-1058.57Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A067GHI99.5e-1060.56Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g036027mg PE=4 SV=1[more]
V4UFE99.5e-1060.56Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017350mg PE=4 ... [more]
A0A1R3FVP92.1e-0952.11Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_38300 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN49382.16.3e-3289.87hypothetical protein Csa_004198 [Cucumis sativus][more]
KAG7034699.11.3e-2988.61hypothetical protein SDJN02_04429, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6581417.14.1e-2387.14hypothetical protein SDJN03_21419, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_030972441.18.8e-1058.57uncharacterized protein LOC115992393 [Quercus lobata][more]
ESR62900.12.0e-0960.56hypothetical protein CICLE_v10017350mg [Citrus clementina][more]
Match NameE-valueIdentityDescription
AT5G46295.12.8e-0640.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33726TRANSMEMBRANE PROTEINcoord: 13..79
NoneNo IPR availablePANTHERPTHR33726:SF3TRANSMEMBRANE PROTEINcoord: 13..79

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0017324.1PI0017324.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane