PI0017303 (gene) Melon (PI 482460) v1

Overview


Name	PI0017303
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Unknown protein
Location	chr11: 3619154 .. 3619515 (+)
RNA-Seq Expression	PI0017303
Synteny	PI0017303

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGAACAAATGCTTACAATACAACAAGAAGCATTACAGGTAACGTTTTGGCGCTCGCAAATGAAGAGATGAAAACAGAAGAAGGCAAGTGAAGAGAAGTGTTCCATAGAATGTATATATATGTGTGTGTGTGTGCGCGCGCGTGTGTATATATGCAGAAGAGAGAGAAGAACAGTAAATCAAAGAAAGAAGAAAGCTCTAAACAATAAATGGAACCATAACCACAAATTAAAGAGTTTCAAACGTTGAAGTTTCTGAGAGTGAAACCGATTCGAGAGAAAACGCTGCAAACGCCGAAGATCACCACAACAGAAAAATTGAAGTTTATCTTCGGCGTGAATTTGAGATGAATTCGGTTTAG

mRNA sequence

ATGAGAACAAATGCTTACAATACAACAAGAAGCATTACAGGTAACGTTTTGGCGCTCGCAAATGAAGAGATGAAAACAGAAGAAGGCAAAGTTTCAAACGTTGAAGTTTCTGAGAGTGAAACCGATTCGAGAGAAAACGCTGCAAACGCCGAAGATCACCACAACAGAAAAATTGAAGTTTATCTTCGGCGTGAATTTGAGATGAATTCGGTTTAG

Coding sequence (CDS)

ATGAGAACAAATGCTTACAATACAACAAGAAGCATTACAGGTAACGTTTTGGCGCTCGCAAATGAAGAGATGAAAACAGAAGAAGGCAAAGTTTCAAACGTTGAAGTTTCTGAGAGTGAAACCGATTCGAGAGAAAACGCTGCAAACGCCGAAGATCACCACAACAGAAAAATTGAAGTTTATCTTCGGCGTGAATTTGAGATGAATTCGGTTTAG

Protein sequence

MRTNAYNTTRSITGNVLALANEEMKTEEGKVSNVEVSESETDSRENAANAEDHHNRKIEVYLRREFEMNSV

Homology

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BLAST of PI0017303 vs. ExPASy TrEMBL
Match: A0A0A0KD55 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G325410 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.8e-18
Identity = 58/73 (79.45%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MRTNAYNTTRSITGNVLALANEEMKTEEGKVSNVEVSESETDSRENAANAEDHHNRK--I 60
          MR NAYNTTRSIT  VLALANE+ KTEEG+V+NVEV+ESETDSRENAANAEDH  RK  +
Sbjct: 1  MRRNAYNTTRSITDYVLALANEKKKTEEGEVTNVEVTESETDSRENAANAEDHRYRKLEV 60

Query: 61 EVYLRREFEMNSV 72
          EV LRREFEMN V
Sbjct: 61 EVCLRREFEMNLV 73

The following BLAST results are available for this feature:

BLAST of PI0017303 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017303 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KD55	3.8e-18	79.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G325410 PE=4 SV=1	[more]

BLAST of PI0017303 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

BLAST of PI0017303 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017303.1	PI0017303.1	mRNA