PI0017213 (gene) Melon (PI 482460) v1

Overview


Name	PI0017213
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Zinc finger CCCH domain-containing protein 39-like
Location	chr01: 27229763 .. 27232359 (-)
RNA-Seq Expression	PI0017213
Synteny	PI0017213

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAATCCAAACAGTTCAAAAATTAGACCGCGAAACAAGTCAAGGGGGGAAACGAAAGGACCCCCCCCCGCCCCATAAACCGAAGCAGCCACCGCGATTTATGATCGGAACTCCACCGATGAATCTCACGGCGGAGTTCACTTCATCTTCTCCCCTGAGTTTTCCAATGGACGGCTAGGCTTTTACTCTCGTATTTCTCCACCTTCCTTGTAAATATTGTACAATAAATTGAATATATAAATCAGTTGCCATTTCAAATTTCATCGATTTCTTCCCAATTTCTGGACTTAGGTTTGCTCCGGAATTTCTTTTCGACGCTCTGCTTGCTTATTGGGCAAATTTTCATCAGGTATCTCTATGGAGTTTTTGATTCTTTTGCTCCAAATTTGATCTCCTCGACTAAACTGCATGTAACAATCCTTGCTTGATTCTCTTGCGATCTGAAGATTTCGACAATGTACAGAGATTTAAGCGATTCTTGCAATTATAACTTTTTGGAAAATGAATTTTGCCTAGAATTCTTCTGTTTTTCCGTTCAAGGAATTTGAATCTTGAAATTGGATGGTTTGGCCCTTGAAATGAGTGCACCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTCTTGCCTCCTCCGTATCCTGATCCAAGAAACCAATCGTTCTATCGGCCTACGATGTCTGGAGCTGCTAGTAGTTGGAGAATGCCCTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATTGGGTATGACCATGAGTTGGGGCGTTCATATACATCTGGTTTTAATGATACTCACAGAATGTTACCTTCCAGACCAGGAATTGAATTCCATGAAGGTCAATTATCAGAGCGTTGGAATGTTGATAACTCGAATGAAATGAAAGTGTGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAGGGATTCGGGCTCCTCCAGCCAAAATTATGAGGTTAGAACAGTAGCTTTTGGTCATGTTATGGATCGAAGAAGTGGGTTTGATCAATTGGAAGAAGTCCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGATTCCAAAGCCTTTAATTTGCAAATCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGCCCATATGGGGCCAGTTGTCGCTTTGCCCATGGAGAAGCAGGTATTGTGAGATTCCTCTTTCATTTCCATTATCAATTTACGATTCCATATGTTTTCAAGTGACTTACAGCTCTCCAAGCAAGAATGAATGCCTCAGCATGTATAAAATCTATTCTCTTGCCATTTTCAGTTCCGTTACTTGTTCCGAGAAATTGAATTTTTGCCTTAAATCACCACCTCAAATTTTATGAAATAAATCACCTTGGCTTGATTCAAATGAATCTTCTTTTGTTTTTTTTTTTTACAATTGGGATCAAACTTCTAACCTAAAAGTTATCATACATGCCATTGCACAATGCGCGATGCTCATTTTGGCTCAAATGAATCCCCTTTGTAATCTCTTTTTCTTTTTTTTAATAATATTTTTTGTTAATGCTTAACCATATATACTAATGGACATTCTAACAATGAAATAGGCAAGAAGATTTACGAACTCGAACTACAAATGTCAACCATGTGGATCTACTTATTCATCTTTGCTTGAATCGTTTTCATGAAATCAAAAGTTGGTGATTCTCATATTACAGGCATTAATATTTCCCTTGTCTTCTTTGTTTTTGGAGAAAATAGAACTACAGAAGCTTGAGCTCTGCAGTGCATCACAACGTGGGAGCGTAGGTGGTATCTCTGCAACAACTACTGCTGCTGTCGAAGCTGGATCAAGGAGCAGCAGAGAAATTGGAACCGACTGTAAGAATAAAGGGCCAAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAGATTGAGTTTTCCGCAAGACTTGCAGTACAAAGATTTGACCAAATCCCGAGGCTTTTTCTAATTCTCATAAATTGGTTGAGAAAATGAAGGTTCTTCCTGAACTTCATATTGACATTGAATATAGCGTATGGATAATAGAAACCATTCTTCACAAGAATATGAAAATTTTATGTCTTTTTTGTGCACGACTCTGGAATATAGAAGCAAAGGGCAAAAATCAAGATGATTAGTCTGTTCATGGTATTCCATCTTTCAACTTGTTTAGTTTTACTTTTTGACAGATATAAAAGTAGTATGAAGATTTGAACTCTAAATGAAAACTGTTTCCCACCCAGCCACTGAATTGACTGATAATAGTTATAGTTATGAATAATAATAGCCTGTTACCTAATTAGAACTTTAGAAGATTATAGATTCATGTGGGACATGTAGATGAGAATTGAGAAGTGATGCAGGGTGGTATCCGGAGTAATTAAATAAACGTATTTGAAGATTTGAACTCCTGAATGCAATCTTTAGAATTTTTCTGCCTTTTTCTGCCTTTGTATACTTTCTTTCAAATGTTTAATTTTAGTTTCAGCACGTTCAGTGGACACAAACTTCAAA

mRNA sequence

GGAAATCCAAACAGTTCAAAAATTAGACCGCGAAACAAGTCAAGGGGGGAAACGAAAGGACCCCCCCCCGCCCCATAAACCGAAGCAGCCACCGCGATTTATGATCGGAACTCCACCGATGAATCTCACGGCGGAGTTCACTTCATCTTCTCCCCTGAGTTTTCCAATGGACGGCTAGGCTTTTACTCTCGTATTTCTCCACCTTCCTTGTAAATATTGTACAATAAATTGAATATATAAATCAGTTGCCATTTCAAATTTCATCGATTTCTTCCCAATTTCTGGACTTAGGTTTGCTCCGGAATTTCTTTTCGACGCTCTGCTTGCTTATTGGGCAAATTTTCATCAGGTATCTCTATGGAGTTTTTGATTCTTTTGCTCCAAATTTGATCTCCTCGACTAAACTGCATGTAACAATCCTTGCTTGATTCTCTTGCGATCTGAAGATTTCGACAATGTACAGAGATTTAAGCGATTCTTGCAATTATAACTTTTTGGAAAATGAATTTTGCCTAGAATTCTTCTGTTTTTCCGTTCAAGGAATTTGAATCTTGAAATTGGATGGTTTGGCCCTTGAAATGAGTGCACCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTCTTGCCTCCTCCGTATCCTGATCCAAGAAACCAATCGTTCTATCGGCCTACGATGTCTGGAGCTGCTAGTAGTTGGAGAATGCCCTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATTGGGTATGACCATGAGTTGGGGCGTTCATATACATCTGGTTTTAATGATACTCACAGAATGTTACCTTCCAGACCAGGAATTGAATTCCATGAAGGTCAATTATCAGAGCGTTGGAATGTTGATAACTCGAATGAAATGAAAGTGTGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAGGGATTCGGGCTCCTCCAGCCAAAATTATGAGGTTAGAACAGTAGCTTTTGGTCATGTTATGGATCGAAGAAGTGGGTTTGATCAATTGGAAGAAGTCCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGATTCCAAAGCCTTTAATTTGCAAATCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGCCCATATGGGGCCAGTTGTCGCTTTGCCCATGGAGAAGCAGAACTACAGAAGCTTGAGCTCTGCAGTGCATCACAACGTGGGAGCGTAGGTGGTATCTCTGCAACAACTACTGCTGCTGTCGAAGCTGGATCAAGGAGCAGCAGAGAAATTGGAACCGACTGTAAGAATAAAGGGCCAAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAGATTGAGTTTTCCGCAAGACTTGCAGTACAAAGATTTGACCAAATCCCGAGGCTTTTTCTAATTCTCATAAATTGGTTGAGAAAATGAAGGTTCTTCCTGAACTTCATATTGACATTGAATATAGCGTATGGATAATAGAAACCATTCTTCACAAGAATATGAAAATTTTATGTCTTTTTTGTGCACGACTCTGGAATATAGAAGCAAAGGGCAAAAATCAAGATGATTAGTCTGTTCATGGTATTCCATCTTTCAACTTGTTTAGTTTTACTTTTTGACAGATATAAAAGTAGTATGAAGATTTGAACTCTAAATGAAAACTGTTTCCCACCCAGCCACTGAATTGACTGATAATAGTTATAGTTATGAATAATAATAGCCTGTTACCTAATTAGAACTTTAGAAGATTATAGATTCATGTGGGACATGTAGATGAGAATTGAGAAGTGATGCAGGGTGGTATCCGGAGTAATTAAATAAACGTATTTGAAGATTTGAACTCCTGAATGCAATCTTTAGAATTTTTCTGCCTTTTTCTGCCTTTGTATACTTTCTTTCAAATGTTTAATTTTAGTTTCAGCACGTTCAGTGGACACAAACTTCAAA

Coding sequence (CDS)

ATGAGTGCACCTAATCGGTTTGTCCCTGAGGCTCGTGGCAATTGGCCGCTCTTGCCTCCTCCGTATCCTGATCCAAGAAACCAATCGTTCTATCGGCCTACGATGTCTGGAGCTGCTAGTAGTTGGAGAATGCCCTCAAATTTTGGGATTCCACCATGGAACAATTGGAACATTGGGTATGACCATGAGTTGGGGCGTTCATATACATCTGGTTTTAATGATACTCACAGAATGTTACCTTCCAGACCAGGAATTGAATTCCATGAAGGTCAATTATCAGAGCGTTGGAATGTTGATAACTCGAATGAAATGAAAGTGTGCAGACTGTTCCAACGCCGGAAGAAATGTGCATATGGGGATCAGTGTCGTTTCCTTCATGAAATTCCTGAGAAAACTAGGGATTCGGGCTCCTCCAGCCAAAATTATGAGGTTAGAACAGTAGCTTTTGGTCATGTTATGGATCGAAGAAGTGGGTTTGATCAATTGGAAGAAGTCCGATCAAAAGTACAAACGAAGGTGGTTGTCCGTGGTGAGATTCCAAAGCCTTTAATTTGCAAATCAAGGCCCTGTTACCCCTGGCAGACCACTGGTCGCTGCCCATATGGGGCCAGTTGTCGCTTTGCCCATGGAGAAGCAGAACTACAGAAGCTTGAGCTCTGCAGTGCATCACAACGTGGGAGCGTAGGTGGTATCTCTGCAACAACTACTGCTGCTGTCGAAGCTGGATCAAGGAGCAGCAGAGAAATTGGAACCGACTGTAAGAATAAAGGGCCAAGAATTAACCAATTCTTTGAATCAAAGGAGTCTAAGAAGTTGATTGGCATTTATGCCGACTGGCTCGAAGATTGA

Protein sequence

MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGYDHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGEIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGISATTTAAVEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED

Homology

[Close]

BLAST of PI0017213 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.9e-13
Identity = 56/188 (29.79%), Postives = 84/188 (44.68%), Query Frame = 0


Query: 104 MKVCRLFQRRKKCAYGDQCRFLHEIPEKTR-DSGS--SSQNYEVRTVAFGHVMDRRSGFD 163
           MK+CR F   ++C YGD+C F+HE   K R DSG    S    V   A     D  S   
Sbjct: 186 MKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLI 245

Query: 164 QLEEVRSKVQTKVVVRGEIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAEL-QKLEL 223
           ++    S      +  G + K +  K+R C  +  TG+CP+G  C FAHG+AEL   +  
Sbjct: 246 EVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGR 305

Query: 224 CSASQRGSVGGIS--ATTTAAVEAGSRSSREIGTD---CKNKGPRINQFFESKESKKLIG 283
                  +V  ++  A   A      +   ++  D      +G R     +  +SKK+  
Sbjct: 306 VEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINR 365

[Close]

BLAST of PI0017213 vs. ExPASy Swiss-Prot
Match: Q9LQM3 (Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=At1g32360 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 59/211 (27.96%), Postives = 84/211 (39.81%), Query Frame = 0


Query: 107 CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVR 166
           C+ F   + C YG+ C FLH+   + R+S + S    +    +G      SG   +    
Sbjct: 178 CKKFYTEEGCPYGESCTFLHDEASRNRESVAIS----LGPGGYGSGGGGGSGGGSVGGGG 237

Query: 167 SKVQTKVVVRG---------EIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKL 226
           S     V+  G         +I KP   K+R C  W+ TG CP+GA C FAHG AEL + 
Sbjct: 238 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRF 297

Query: 227 ELCSASQRGSVG---------------GISATTT-----------AAVEAGSRSSREIGT 283
                 + G  G               G+S TTT           A+   G    R    
Sbjct: 298 GGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSA 357

[Close]

BLAST of PI0017213 vs. ExPASy Swiss-Prot
Match: Q84UQ3 (Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX=39947 GN=Os08g0159800 PE=4 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 38/110 (34.55%), Postives = 51/110 (46.36%), Query Frame = 0


Query: 107 CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVR 166
           C+ F   + C YGD C FLH+   K R+S + S +  V     G       G        
Sbjct: 175 CKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGG-------GSYNSAAAA 234

Query: 167 SKVQTKVVVRGEIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQK 217
           +   +     G + KP   K+R C  W+ TG CP+G+ C FAHG AEL K
Sbjct: 235 AASASAAAGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELHK 277

[Close]

BLAST of PI0017213 vs. ExPASy Swiss-Prot
Match: Q5PP65 (Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN=At2g35430 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.8e-06
Identity = 33/111 (29.73%), Postives = 50/111 (45.05%), Query Frame = 0


Query: 186 KSRPCYPWQTTGRCPYGASCRFAHGEAELQKL--------------ELCSASQRGSVGGI 245
           K+R C  WQTTG CP+G+ C FAHG +EL                       QRG V  +
Sbjct: 145 KTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTV 204

Query: 246 SATTTAAVEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           ++  +  V +   SS       K  G R  + ++  +  K+  +Y DW++D
Sbjct: 205 TSLVSPGVSSQRTSS---AVTQKPNGVRTQRKWKGPD--KISRVYGDWIDD 250

[Close]

BLAST of PI0017213 vs. ExPASy TrEMBL
Match: A0A0A0KBW4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433210 PE=4 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 7.8e-155
Identity = 265/284 (93.31%), Postives = 269/284 (94.72%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSG  SSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  DHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           +HE GRSYT GFNDT RMLPS PGIEF EGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIP+KTRDSGSSSQNYEV TVAFGHVMDR SGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGIS--ATTTAA 240
           KPLI KSRPCYPWQTTGRCPYGA CRFAHGEAELQKLE C+ASQRGSVGG+S  ATTTAA
Sbjct: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA 240

Query: 241 VEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           VEAG RSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 284

[Close]

BLAST of PI0017213 vs. ExPASy TrEMBL
Match: A0A1S4E329 (zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LOC103499783 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.0e-148
Identity = 258/284 (90.85%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYR TMSGA SSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  DHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           +HELGRSY  GFNDTHRMLPSRPGIEFHEGQLSERWNVD+SNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDDSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIPEKTRDSGSSSQNYEV          RRSGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGIS--ATTTAA 240
           KPLI K RPCYPWQTTGRCPYGA CRFAHGEAELQKLE CSASQRGSVGG+S  ATTTA 
Sbjct: 181 KPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAP 240

Query: 241 VEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           VEAG RSS+EIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 274

[Close]

BLAST of PI0017213 vs. ExPASy TrEMBL
Match: A0A5A7UUP3 (Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002180 PE=4 SV=1)

HSP 1 Score: 533.1 bits (1372), Expect = 7.0e-148
Identity = 258/284 (90.85%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYR TMSGA SSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  DHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           +HELGRSY  GFNDTHRMLPSRPGIEFHEGQLSERWNVD+SNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDDSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIPEKTRDSGSSSQNYEV          RRSGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGIS--ATTTAA 240
           KPLI K RPCYPWQTTGRCPYGA CRFAHGEAELQKLE CSASQRGSVGG+S  ATTTA 
Sbjct: 181 KPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAP 240

Query: 241 VEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           VEAG RSS+EIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 274

[Close]

BLAST of PI0017213 vs. ExPASy TrEMBL
Match: A0A6J1HGS0 (zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662 GN=LOC111464190 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 5.1e-90
Identity = 188/285 (65.96%), Postives = 206/285 (72.28%), Query Frame = 0


Query: 10  EARGNW-PLLPPPYPD----PRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIG-YDHE 69
           EARG W PL PPP P      R  SFY+PTMS    S  MPSNF IP WNN +IG +D+E
Sbjct: 16  EARGVWPPLRPPPLPPRYTVGRFPSFYQPTMSEIVPSRVMPSNFEIPQWNNVHIGLHDNE 75

Query: 70  LGRSYTSGFND-THRMLPSRPGIEFHEGQLSERWNVDN----SNEMKVCRLFQRRKKCAY 129
           L   Y    ND T   LPS  GIEFHE +L E   V++    S EMKVCR FQRR KCAY
Sbjct: 76  LEWRYALASNDHTRGWLPSWRGIEFHENRLPECPIVNSRTGMSTEMKVCRQFQRRGKCAY 135

Query: 130 GDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGE 189
           GDQCRFLH+IPE T+D GSSSQN+EVR VA GHVMD +S FDQ EEVRSKVQTK+V R E
Sbjct: 136 GDQCRFLHKIPENTKDFGSSSQNHEVRAVASGHVMDGKSMFDQFEEVRSKVQTKIVARSE 195

Query: 190 IPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGISATTTAA 249
           IP P+ CK+R CY WQTTG C YG  CRFAHGEAELQKLE CS S+RG VGG SATT AA
Sbjct: 196 IPMPVNCKTRLCYLWQTTGHCSYGEVCRFAHGEAELQKLESCSTSERGRVGGASATTKAA 255

Query: 250 VEAGSRSSREIGTDCKNKG-PRINQFFESKESKKLIGIYADWLED 283
             AG R SR IGTDCKNKG  R+ Q F+SKE KKLIGIYADWLE+
Sbjct: 256 AAAGLRCSRGIGTDCKNKGSSRMKQLFKSKEHKKLIGIYADWLEN 300

[Close]

BLAST of PI0017213 vs. ExPASy TrEMBL
Match: A0A6J1JNJ8 (zinc finger CCCH domain-containing protein 39-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488499 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 2.8e-88
Identity = 183/289 (63.32%), Postives = 202/289 (69.90%), Query Frame = 0


Query: 1   MSAPNRF------VPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWN 60
           MSA  RF      VPEARG+   LPPP+ D                   MPS   IPP N
Sbjct: 1   MSATYRFNEITPPVPEARGDSSALPPPHSD------------SGLQQRTMPSKSRIPPSN 60

Query: 61  NWNIGYDHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRK 120
           N NIGYDHELG   T   NDTHR LPS  GIEFHEGQLS R     SNEMK CR FQRR+
Sbjct: 61  NRNIGYDHELGCMSTPALNDTHRRLPSLRGIEFHEGQLSGR-----SNEMKACRQFQRRR 120

Query: 121 KCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVV 180
           KCAYGDQCR+LHEIPEKTRD GS++QNYEVR V  GHVM+RR G DQLEEVRSKVQT++V
Sbjct: 121 KCAYGDQCRYLHEIPEKTRDFGSTTQNYEVRIVDSGHVMNRRRGLDQLEEVRSKVQTEIV 180

Query: 181 VRGEIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKL-ELCSASQRGSVGGISA 240
           VRGEIPKP+ CK+R CYP Q TG CPYGA CR AH EAELQKL    +ASQRGSV   SA
Sbjct: 181 VRGEIPKPVRCKTRLCYPLQKTGSCPYGAVCRIAHEEAELQKLGPFIAASQRGSVSDASA 240

Query: 241 TTTAAVEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           TT+AA +       EIG  CKN+ PR+ QFF+SK+SK+LI IYADWLED
Sbjct: 241 TTSAATQV------EIGIVCKNEEPRMKQFFKSKKSKRLIAIYADWLED 266

[Close]

BLAST of PI0017213 vs. NCBI nr
Match: XP_004135841.1 (zinc finger CCCH domain-containing protein 39 isoform X1 [Cucumis sativus] >XP_011659533.1 zinc finger CCCH domain-containing protein 39 isoform X1 [Cucumis sativus] >KGN45291.1 hypothetical protein Csa_016245 [Cucumis sativus])

HSP 1 Score: 556.2 bits (1432), Expect = 1.6e-154
Identity = 265/284 (93.31%), Postives = 269/284 (94.72%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSG  SSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  DHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           +HE GRSYT GFNDT RMLPS PGIEF EGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIP+KTRDSGSSSQNYEV TVAFGHVMDR SGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGIS--ATTTAA 240
           KPLI KSRPCYPWQTTGRCPYGA CRFAHGEAELQKLE C+ASQRGSVGG+S  ATTTAA
Sbjct: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCNASQRGSVGGVSGTATTTAA 240

Query: 241 VEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           VEAG RSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 284

[Close]

BLAST of PI0017213 vs. NCBI nr
Match: XP_008461087.1 (PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >XP_008461088.1 PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >XP_016902639.1 PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >XP_016902640.1 PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >KAA0058770.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa] >TYK10564.1 zinc finger CCCH domain-containing protein 39-like [Cucumis melo var. makuwa])

HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147
Identity = 258/284 (90.85%), Postives = 262/284 (92.25%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYR TMSGA SSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRSTMSGAVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  DHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           +HELGRSY  GFNDTHRMLPSRPGIEFHEGQLSERWNVD+SNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHELGRSYRPGFNDTHRMLPSRPGIEFHEGQLSERWNVDDSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIPEKTRDSGSSSQNYEV          RRSGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPEKTRDSGSSSQNYEV----------RRSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGIS--ATTTAA 240
           KPLI K RPCYPWQTTGRCPYGA CRFAHGEAELQKLE CSASQRGSVGG+S  ATTTA 
Sbjct: 181 KPLIGKPRPCYPWQTTGRCPYGAGCRFAHGEAELQKLEPCSASQRGSVGGVSATATTTAP 240

Query: 241 VEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           VEAG RSS+EIGTDCKNKGPRINQFFESKESKKLIGIYADWLED
Sbjct: 241 VEAGLRSSKEIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 274

[Close]

BLAST of PI0017213 vs. NCBI nr
Match: XP_038897168.1 (zinc finger CCCH domain-containing protein 39-like isoform X1 [Benincasa hispida] >XP_038897169.1 zinc finger CCCH domain-containing protein 39-like isoform X1 [Benincasa hispida] >XP_038897170.1 zinc finger CCCH domain-containing protein 39-like isoform X1 [Benincasa hispida])

HSP 1 Score: 478.4 bits (1230), Expect = 4.2e-131
Identity = 236/288 (81.94%), Postives = 248/288 (86.11%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARG+W  L PPYPD R QSF++PTMS   SSW MPSN  IPPWNN N+GY
Sbjct: 1   MSAPNRFVPEARGDWRPL-PPYPDARLQSFHQPTMSETVSSWGMPSNIRIPPWNNRNVGY 60

Query: 61  DHE--LGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVD----NSNEMKVCRLFQRRK 120
           DHE  LGR YT GFNDTHR LPS PGIEFHEGQLSER  VD     SNEMKVCR FQRR+
Sbjct: 61  DHELDLGRLYTPGFNDTHRRLPSTPGIEFHEGQLSERSIVDCRTGTSNEMKVCRQFQRRR 120

Query: 121 KCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVV 180
           KCAYGDQCRFLHEIPEKTR+ GSSSQNYEVR VA GHV+DRRSGFDQLEEVRSKVQTK+V
Sbjct: 121 KCAYGDQCRFLHEIPEKTREFGSSSQNYEVRAVASGHVVDRRSGFDQLEEVRSKVQTKIV 180

Query: 181 VRGEIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLELCSASQRGSVGGISAT 240
           VRGEIPKPLICK+RPCYPWQTTGRCPYGA CRFAHGEAELQK E CSA+QRGSVGG S T
Sbjct: 181 VRGEIPKPLICKTRPCYPWQTTGRCPYGAGCRFAHGEAELQKPEPCSAAQRGSVGGASLT 240

Query: 241 TTAAVEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           T+   EAG RSS  IGTDCKNKGPR+NQFFESKESKKLIGIYADWLED
Sbjct: 241 TSTVTEAGLRSSTGIGTDCKNKGPRMNQFFESKESKKLIGIYADWLED 287

[Close]

BLAST of PI0017213 vs. NCBI nr
Match: XP_011659534.1 (uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus])

HSP 1 Score: 436.8 bits (1122), Expect = 1.4e-118
Identity = 201/218 (92.20%), Postives = 204/218 (93.58%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSG  SSWRMPSNFGIPPWNNWNIGY
Sbjct: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGVVSSWRMPSNFGIPPWNNWNIGY 60

Query: 61  DHELGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120
           +HE GRSYT GFNDT RMLPS PGIEF EGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD
Sbjct: 61  EHEFGRSYTPGFNDTRRMLPSGPGIEFREGQLSERWNVDNSNEMKVCRLFQRRKKCAYGD 120

Query: 121 QCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVVVRGEIP 180
           QCRFLHEIP+KTRDSGSSSQNYEV TVAFGHVMDR SGFDQLEEVRSKVQTKVVVRGEIP
Sbjct: 121 QCRFLHEIPDKTRDSGSSSQNYEVSTVAFGHVMDRGSGFDQLEEVRSKVQTKVVVRGEIP 180

Query: 181 KPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKLE 219
           KPLI KSRPCYPWQTTGRCPYGA CRFAHGEAE +  E
Sbjct: 181 KPLIAKSRPCYPWQTTGRCPYGAGCRFAHGEAENRTTE 218

[Close]

BLAST of PI0017213 vs. NCBI nr
Match: XP_038897171.1 (zinc finger CCCH domain-containing protein 12-like isoform X2 [Benincasa hispida])

HSP 1 Score: 369.4 bits (947), Expect = 2.8e-98
Identity = 179/218 (82.11%), Postives = 188/218 (86.24%), Query Frame = 0


Query: 1   MSAPNRFVPEARGNWPLLPPPYPDPRNQSFYRPTMSGAASSWRMPSNFGIPPWNNWNIGY 60
           MSAPNRFVPEARG+W  L PPYPD R QSF++PTMS   SSW MPSN  IPPWNN N+GY
Sbjct: 1   MSAPNRFVPEARGDWRPL-PPYPDARLQSFHQPTMSETVSSWGMPSNIRIPPWNNRNVGY 60

Query: 61  DHE--LGRSYTSGFNDTHRMLPSRPGIEFHEGQLSERWNVD----NSNEMKVCRLFQRRK 120
           DHE  LGR YT GFNDTHR LPS PGIEFHEGQLSER  VD     SNEMKVCR FQRR+
Sbjct: 61  DHELDLGRLYTPGFNDTHRRLPSTPGIEFHEGQLSERSIVDCRTGTSNEMKVCRQFQRRR 120

Query: 121 KCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVRSKVQTKVV 180
           KCAYGDQCRFLHEIPEKTR+ GSSSQNYEVR VA GHV+DRRSGFDQLEEVRSKVQTK+V
Sbjct: 121 KCAYGDQCRFLHEIPEKTREFGSSSQNYEVRAVASGHVVDRRSGFDQLEEVRSKVQTKIV 180

Query: 181 VRGEIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEA 213
           VRGEIPKPLICK+RPCYPWQTTGRCPYGA CRFAHGEA
Sbjct: 181 VRGEIPKPLICKTRPCYPWQTTGRCPYGAGCRFAHGEA 217

[Close]

BLAST of PI0017213 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-14
Identity = 56/188 (29.79%), Postives = 84/188 (44.68%), Query Frame = 0


Query: 104 MKVCRLFQRRKKCAYGDQCRFLHEIPEKTR-DSGS--SSQNYEVRTVAFGHVMDRRSGFD 163
           MK+CR F   ++C YGD+C F+HE   K R DSG    S    V   A     D  S   
Sbjct: 186 MKLCRKFCFGEECPYGDRCNFIHEDLSKFREDSGKLRESSVISVGATAADQPSDTASNLI 245

Query: 164 QLEEVRSKVQTKVVVRGEIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAEL-QKLEL 223
           ++    S      +  G + K +  K+R C  +  TG+CP+G  C FAHG+AEL   +  
Sbjct: 246 EVNRQGSIPVPAPMNNGGVVKTVYWKTRLCMKFDITGQCPFGDKCHFAHGQAELHNSVGR 305

Query: 224 CSASQRGSVGGIS--ATTTAAVEAGSRSSREIGTD---CKNKGPRINQFFESKESKKLIG 283
                  +V  ++  A   A      +   ++  D      +G R     +  +SKK+  
Sbjct: 306 VEGEAMNAVASVNKQAVVPANEAFAMKPITQVTADSSGLNEEGRRKKCLLKWSDSKKINR 365

[Close]

BLAST of PI0017213 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-11
Identity = 59/211 (27.96%), Postives = 84/211 (39.81%), Query Frame = 0


Query: 107 CRLFQRRKKCAYGDQCRFLHEIPEKTRDSGSSSQNYEVRTVAFGHVMDRRSGFDQLEEVR 166
           C+ F   + C YG+ C FLH+   + R+S + S    +    +G      SG   +    
Sbjct: 178 CKKFYTEEGCPYGESCTFLHDEASRNRESVAIS----LGPGGYGSGGGGGSGGGSVGGGG 237

Query: 167 SKVQTKVVVRG---------EIPKPLICKSRPCYPWQTTGRCPYGASCRFAHGEAELQKL 226
           S     V+  G         +I KP   K+R C  W+ TG CP+GA C FAHG AEL + 
Sbjct: 238 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHRF 297

Query: 227 ELCSASQRGSVG---------------GISATTT-----------AAVEAGSRSSREIGT 283
                 + G  G               G+S TTT           A+   G    R    
Sbjct: 298 GGGLVEEEGKDGVSPNPDTKQTVQNPKGLSDTTTLLSPGVPHNADASYHTGVALQRASSA 357

[Close]

BLAST of PI0017213 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 53.1 bits (126), Expect = 4.1e-07
Identity = 33/111 (29.73%), Postives = 50/111 (45.05%), Query Frame = 0


Query: 186 KSRPCYPWQTTGRCPYGASCRFAHGEAELQKL--------------ELCSASQRGSVGGI 245
           K+R C  WQTTG CP+G+ C FAHG +EL                       QRG V  +
Sbjct: 145 KTRICNKWQTTGYCPFGSHCHFAHGPSELHTFGGGLVEGECKIGTSATLDTKQRGQVDTV 204

Query: 246 SATTTAAVEAGSRSSREIGTDCKNKGPRINQFFESKESKKLIGIYADWLED 283
           ++  +  V +   SS       K  G R  + ++  +  K+  +Y DW++D
Sbjct: 205 TSLVSPGVSSQRTSS---AVTQKPNGVRTQRKWKGPD--KISRVYGDWIDD 250

The following BLAST results are available for this feature:

BLAST of PI0017213 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LT81	2.9e-13	29.79	Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LQM3	1.7e-10	27.96	Zinc finger CCCH domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q84UQ3	1.7e-10	34.55	Zinc finger CCCH domain-containing protein 56 OS=Oryza sativa subsp. japonica OX...	[more]
Q5PP65	5.8e-06	29.73	Zinc finger CCCH domain-containing protein 28 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of PI0017213 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBW4	7.8e-155	93.31	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433210 PE=4 SV=1	[more]
A0A1S4E329	7.0e-148	90.85	zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5A7UUP3	7.0e-148	90.85	Zinc finger CCCH domain-containing protein 39-like OS=Cucumis melo var. makuwa O...	[more]
A0A6J1HGS0	5.1e-90	65.96	zinc finger CCCH domain-containing protein 39-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JNJ8	2.8e-88	63.32	zinc finger CCCH domain-containing protein 39-like isoform X1 OS=Cucurbita maxim...	[more]

BLAST of PI0017213 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135841.1	1.6e-154	93.31	zinc finger CCCH domain-containing protein 39 isoform X1 [Cucumis sativus] >XP_0...	[more]
XP_008461087.1	1.5e-147	90.85	PREDICTED: zinc finger CCCH domain-containing protein 39-like [Cucumis melo] >XP...	[more]
XP_038897168.1	4.2e-131	81.94	zinc finger CCCH domain-containing protein 39-like isoform X1 [Benincasa hispida...	[more]
XP_011659534.1	1.4e-118	92.20	uncharacterized protein LOC101205166 isoform X2 [Cucumis sativus]	[more]
XP_038897171.1	2.8e-98	82.11	zinc finger CCCH domain-containing protein 12-like isoform X2 [Benincasa hispida...	[more]

BLAST of PI0017213 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19360.1	2.0e-14	29.79	Zinc finger (CCCH-type) family protein	[more]
AT1G32360.1	1.2e-11	27.96	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	4.1e-07	29.73	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 186..211 e-value: 8.1E-6 score: 35.3 coord: 101..128 e-value: 1.0E-4 score: 31.6
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 105..126 e-value: 7.1E-7 score: 29.0 coord: 186..211 e-value: 6.2E-9 score: 35.6
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 184..212 score: 14.840037
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 101..129 score: 14.962095
None	No IPR available	GENE3D	4.10.1000.10		coord: 93..156 e-value: 7.8E-7 score: 31.0
None	No IPR available	GENE3D	4.10.1000.10		coord: 182..217 e-value: 7.8E-13 score: 49.6
None	No IPR available	PANTHER	PTHR12547	CCCH ZINC FINGER/TIS11-RELATED	coord: 26..280
None	No IPR available	PANTHER	PTHR12547:SF121	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 39	coord: 26..280
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 103..130
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 181..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017213.2	PI0017213.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding