PI0017116 (gene) Melon (PI 482460) v1

Overview


Name	PI0017116
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like
Location	chr12: 24465170 .. 24466870 (+)
RNA-Seq Expression	PI0017116
Synteny	PI0017116

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAACCCTTCCAATTTTTCCCATATCTCCCTTGATCTCTTCAAAGTCCAAAATCCCACTCTTTTCCATTACAAAAAGAAAAATAAATGGATTCAGTGTCGGAATCCGGCGGGGGTGGTGCATCGGAGGGCACGGCGGAAGGTTGTTCATCGGCATCGGCATCGGCATCGGCGGTGGCTCCACCAAGCCGATATGAATCTCAAAAAAGAAGAGATTGGAACACCTTCTTACAATATTTGAAGAACCATAAACCGCCACTGTGTTTAGCGCGATGCAGTGGTGCTCACGTGATCGAATTCTTGAAATATTTGGATCAGTTCGGAAAAACTAAGGTCCATGCTTCCCCCTGCCCTTATTTCGGTCACCCAAATCCACCTGCCCCCTGCCCCTGCCCCCTCAAACAAGCTTGGGGTAGCCTCGACGCTTTGATCGGCCGCCTCCGTGCCGCTTACGAAGAGAACGGTGGCCGCCCTGAATCCAACCCATTTGCCGCACGTGCCGTCAGGATTTATCTCCGTGAGGTTCGTGAAGCTCAGGCTAAAGCCAGAGGAATTCCTTACGAGAAAAAGAAACGGAAAAGACCCACCGCCACCGCCCCTCCCCCAGAGACTAGTACCTCCGCGGCCGCCGCCGCCACCACCACCACCACCACCACCACCGAGGATAATCAGCCTGAAACAACCGCTGGTGGCGGTGGTGACGATCCCGCCGTTGCTCCTCCGCCGTCCACAACCGCCGCTTCCACCACCGTATAGTCTCTCAATTACTTCTTTTTCTTTATTTTTTTTTTTAATATTTTTTCCTTGAAATAGCATCTCATCATCTCTCTTAATTGTGATTATGAGTTTTATTTAATCATATAAATATTAAACCTATTAATTCTCATTAATCCGATCAATCAATATCTCAAATTAGATCTTCAATCACTTAAAAAACCCATTATTATTATTTAATTTTTCAATTTCGTCTCCAATCATCATCTTATCTCTATCCTATAATTCAAATCCTAGCTTCATTTCAAACTAATAATTAATTTTCTCCCTTTTTAAATATTTTTAGATATAATATATACTATACTATAAAGACTCAATGATAGCAAAACATACAGATATATAAACAAGAGAGAAAAAAATGAACAAAAATATATATTTTAATTCACAGAAGCATTTATCGAGTTTTGAAATGATAATAGTAAGTTAATTTTAATTTTTTTTTCTTTTTGTCTTTTTTATAGAGTTGGTAGAATCCATATTTATTTTGTGGAGGCCACATAAAAAATAGAGATTGGTAGCATAGTAAGGGCAAAGAGGATGCAGAGAAAAGAAAAGAGTCAGTCCCTCAAAATTTATCATTTTACATATAAGTTGAAACCAATTATAGATAATTTATTTATTTATTTAGAATTAATTTAAGTCCCTGGTCCTTCTTTTATTTTGCATAAATGTTGAATCTGTGTCTTTGTTTATGACACAAAAACACGTGCGTTTCTCTTATGCAACATTTTTCCAGTTTCAGGTGCGCCCCTTCTATTTTCCCTTCATTCTCAATTTTGACCCCTCATTTTACATACATTTACAATTTCTACCTCAACATTCTTATTTCTTTTTTTGTTCTTTCGTTTCTTGTGTGATTATAAACCTAGATCATACTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTAAAAATTATTTATAAGCTG

mRNA sequence

AAAAAAAACCCTTCCAATTTTTCCCATATCTCCCTTGATCTCTTCAAAGTCCAAAATCCCACTCTTTTCCATTACAAAAAGAAAAATAAATGGATTCAGTGTCGGAATCCGGCGGGGGTGGTGCATCGGAGGGCACGGCGGAAGGTTGTTCATCGGCATCGGCATCGGCATCGGCGGTGGCTCCACCAAGCCGATATGAATCTCAAAAAAGAAGAGATTGGAACACCTTCTTACAATATTTGAAGAACCATAAACCGCCACTGTGTTTAGCGCGATGCAGTGGTGCTCACGTGATCGAATTCTTGAAATATTTGGATCAGTTCGGAAAAACTAAGGTCCATGCTTCCCCCTGCCCTTATTTCGGTCACCCAAATCCACCTGCCCCCTGCCCCTGCCCCCTCAAACAAGCTTGGGGTAGCCTCGACGCTTTGATCGGCCGCCTCCGTGCCGCTTACGAAGAGAACGGTGGCCGCCCTGAATCCAACCCATTTGCCGCACGTGCCGTCAGGATTTATCTCCGTGAGGTTCGTGAAGCTCAGGCTAAAGCCAGAGGAATTCCTTACGAGAAAAAGAAACGGAAAAGACCCACCGCCACCGCCCCTCCCCCAGAGACTAGTACCTCCGCGGCCGCCGCCGCCACCACCACCACCACCACCACCACCGAGGATAATCAGCCTGAAACAACCGCTGGTGGCGGTGGTGACGATCCCGCCGTTGCTCCTCCGCCGTCCACAACCGCCGCTTCCACCACCAGTTGGTAGAATCCATATTTATTTTGTGGAGGCCACATAAAAAATAGAGATTGGTAGCATAGTAAGGGCAAAGAGGATGCAGAGAAAAGAAAAGAGTCAGTCCCTCAAAATTTATCATTTTACATATAAGTTGAAACCAATTATAGATAATTTATTTATTTATTTAGAATTAATTTAAGTCCCTGGTCCTTCTTTTATTTTGCATAAATGTTGAATCTGTGTCTTTGTTTATGACACAAAAACACGTGCGTTTCTCTTATGCAACATTTTTCCAGTTTCAGGTGCGCCCCTTCTATTTTCCCTTCATTCTCAATTTTGACCCCTCATTTTACATACATTTACAATTTCTACCTCAACATTCTTATTTCTTTTTTTGTTCTTTCGTTTCTTGTGTGATTATAAACCTAGATCATACTTTTTTCTTTTTCTTTTTCTTTTTTTTTTTAAAAATTATTTATAAGCTG

Coding sequence (CDS)

ATGGATTCAGTGTCGGAATCCGGCGGGGGTGGTGCATCGGAGGGCACGGCGGAAGGTTGTTCATCGGCATCGGCATCGGCATCGGCGGTGGCTCCACCAAGCCGATATGAATCTCAAAAAAGAAGAGATTGGAACACCTTCTTACAATATTTGAAGAACCATAAACCGCCACTGTGTTTAGCGCGATGCAGTGGTGCTCACGTGATCGAATTCTTGAAATATTTGGATCAGTTCGGAAAAACTAAGGTCCATGCTTCCCCCTGCCCTTATTTCGGTCACCCAAATCCACCTGCCCCCTGCCCCTGCCCCCTCAAACAAGCTTGGGGTAGCCTCGACGCTTTGATCGGCCGCCTCCGTGCCGCTTACGAAGAGAACGGTGGCCGCCCTGAATCCAACCCATTTGCCGCACGTGCCGTCAGGATTTATCTCCGTGAGGTTCGTGAAGCTCAGGCTAAAGCCAGAGGAATTCCTTACGAGAAAAAGAAACGGAAAAGACCCACCGCCACCGCCCCTCCCCCAGAGACTAGTACCTCCGCGGCCGCCGCCGCCACCACCACCACCACCACCACCACCGAGGATAATCAGCCTGAAACAACCGCTGGTGGCGGTGGTGACGATCCCGCCGTTGCTCCTCCGCCGTCCACAACCGCCGCTTCCACCACCAGTTGGTAG

Protein sequence

MDSVSESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETSTSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTTSW

Homology

[Close]

BLAST of PI0017116 vs. ExPASy Swiss-Prot
Match: Q7XDD0 (Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 8.5e-69
Identity = 134/177 (75.71%), Postives = 150/177 (84.75%), Query Frame = 0


Query: 5   SESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCS 64
           S+SGGGG   G A G +SASA   A A PSRYESQKRRDWNTF QYL+NH+PPL LARCS
Sbjct: 15  SDSGGGGG--GMATGATSASA---AGASPSRYESQKRRDWNTFGQYLRNHRPPLSLARCS 74

Query: 65  GAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE 124
           GAHV+EFL+YLDQFGKTKVHA  CP+FGHP PPAPCPCPL+QAWGSLDAL+GRLRAAYEE
Sbjct: 75  GAHVLEFLRYLDQFGKTKVHAPACPFFGHPAPPAPCPCPLRQAWGSLDALVGRLRAAYEE 134

Query: 125 NGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETSTSAAA 182
           NGGRPE+NPF ARAVR+YLREVRE QA+ARG+ YEKKKRK+      PP  S++AAA
Sbjct: 135 NGGRPENNPFGARAVRLYLREVREHQARARGVSYEKKKRKK------PPHPSSAAAA 180

[Close]

BLAST of PI0017116 vs. ExPASy Swiss-Prot
Match: Q9LMK2 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68
Identity = 130/161 (80.75%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 6   ESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSG 65
           ES   G S+         S  +S  A PSRYESQKRRDWNTFLQYLKNHKPPL L+RCSG
Sbjct: 2   ESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSG 61

Query: 66  AHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 125
           AHVIEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 62  AHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEEN 121

Query: 126 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP 167
           GGRP+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKRP
Sbjct: 122 GGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKRP 162

[Close]

BLAST of PI0017116 vs. ExPASy Swiss-Prot
Match: A2XVI8 (Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 5.5e-68
Identity = 123/165 (74.55%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 2   DSVSESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLA 61
           DS    GG G   G++   SS S  A A   PSRYE+QKRRDWNTF QYL+NH+PPL LA
Sbjct: 8   DSPPSGGGNGGGGGSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLA 67

Query: 62  RCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 121
           +CSGAHV+EFL+YLDQFGKTKVH + CP+FGHP+PPAPCPCPL+QAWGSLDAL+GRLRAA
Sbjct: 68  QCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAA 127

Query: 122 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP 167
           +EENGGRPESNPFAARAVR+YLREVRE QA+ARG+ YEKKKRK+P
Sbjct: 128 FEENGGRPESNPFAARAVRLYLREVREHQARARGVSYEKKKRKKP 172

[Close]

BLAST of PI0017116 vs. ExPASy Swiss-Prot
Match: Q7XRS1 (Protein G1-like4 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L4 PE=1 SV=2)

HSP 1 Score: 258.8 bits (660), Expect = 5.5e-68
Identity = 123/165 (74.55%), Postives = 141/165 (85.45%), Query Frame = 0


Query: 2   DSVSESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLA 61
           DS    GG G   G++   SS S  A A   PSRYE+QKRRDWNTF QYL+NH+PPL LA
Sbjct: 8   DSPPSGGGNGGGGGSSSSNSSPSMGAGAPQSPSRYEAQKRRDWNTFGQYLRNHRPPLSLA 67

Query: 62  RCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 121
           +CSGAHV+EFL+YLDQFGKTKVH + CP+FGHP+PPAPCPCPL+QAWGSLDAL+GRLRAA
Sbjct: 68  QCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPSPPAPCPCPLRQAWGSLDALVGRLRAA 127

Query: 122 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP 167
           +EENGGRPESNPFAARAVR+YLREVRE QA+ARG+ YEKKKRK+P
Sbjct: 128 FEENGGRPESNPFAARAVRLYLREVREHQARARGVSYEKKKRKKP 172

[Close]

BLAST of PI0017116 vs. ExPASy Swiss-Prot
Match: B8AH02 (Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.2e-67
Identity = 140/220 (63.64%), Postives = 158/220 (71.82%), Query Frame = 0


Query: 8   GGGGASEGTAEGCSSASASASA------VAPPSRYESQKRRDWNTFLQYLKNHKPPLCLA 67
           GGGG  +G A G SSA AS+SA         PSRYE+QKRRDWNTF QYL+NH+PPL LA
Sbjct: 41  GGGGGGDG-AGGSSSAGASSSAGGGAATPQTPSRYEAQKRRDWNTFGQYLRNHRPPLGLA 100

Query: 68  RCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAA 127
           +CSGAHV+EFL+YLDQFGKTKVH + CP+FGHPNPPAPCPCPL+QAWGSLDAL+GRLRAA
Sbjct: 101 QCSGAHVLEFLRYLDQFGKTKVHTAACPFFGHPNPPAPCPCPLRQAWGSLDALVGRLRAA 160

Query: 128 YEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETSTSAAA 187
           +EENGGRPESNPFA RAVR+YLREVRE QA+ARG+ YEKKKRK+P               
Sbjct: 161 FEENGGRPESNPFAVRAVRLYLREVREHQARARGVSYEKKKRKKP--------------- 220

Query: 188 AATTTTTTTTEDNQPETTAGGGG---DDPAVAPPPSTTAA 219
                        QP  T+GGGG     P   PPPS  AA
Sbjct: 221 -------------QPADTSGGGGHPHPPPPPPPPPSAGAA 231

[Close]

BLAST of PI0017116 vs. ExPASy TrEMBL
Match: A0A5A7UVV8 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold340G00670 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.9e-105
Identity = 204/225 (90.67%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSA----SASASAVAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSESGGGGASE T EGCSSA    +A+A+ VAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETS 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP  TAPPPETS
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPETS 180

Query: 181 TSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
           TS      TT TTTT DNQPETTAGGGGDDPAVAPPPSTTAAST+
Sbjct: 181 TS------TTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTS 219

[Close]

BLAST of PI0017116 vs. ExPASy TrEMBL
Match: A0A1S3C5Y5 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC103497051 PE=3 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.9e-105
Identity = 204/225 (90.67%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSA----SASASAVAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSESGGGGASE T EGCSSA    +A+A+ VAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETS 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP  TAPPPETS
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPETS 180

Query: 181 TSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
           TS      TT TTTT DNQPETTAGGGGDDPAVAPPPSTTAAST+
Sbjct: 181 TS------TTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTS 219

[Close]

BLAST of PI0017116 vs. ExPASy TrEMBL
Match: A0A6J1GCE7 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111452872 PE=3 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.6e-83
Identity = 177/227 (77.97%), Postives = 188/227 (82.82%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSAS----ASASAVAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSV+ESGGGG+SE T EG S+      A+A+A APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PL LARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTA--TAPPPE 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR  A  + PPP 
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRAAANVSVPPP- 180

Query: 181 TSTSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
             T  + A ++++ T   D QPETTA G   D     PPSTTAASTT
Sbjct: 181 --TDVSLAGSSSSATVGADIQPETTAAG---DQTGDAPPSTTAASTT 221

[Close]

BLAST of PI0017116 vs. ExPASy TrEMBL
Match: A0A6J1KEN4 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=LOC111493161 PE=3 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 2.2e-83
Identity = 174/223 (78.03%), Postives = 185/223 (82.96%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCL 60
           MDSV+ESGGGG+SE T EG S+  ++  A APPSRYESQKRRDWNTFLQYLKNHKPPL L
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAPPSRYESQKRRDWNTFLQYLKNHKPPLSL 60

Query: 61  ARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 120
           ARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA
Sbjct: 61  ARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 120

Query: 121 AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR--PTATAPPPETSTS 180
           AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR     + PPP   T 
Sbjct: 121 AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRAATNVSVPPP---TD 180

Query: 181 AAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
            + A ++++ T   D QPETTA G   D     PPSTTAASTT
Sbjct: 181 VSLAGSSSSATVGGDIQPETTASG---DQTGDAPPSTTAASTT 217

[Close]

BLAST of PI0017116 vs. ExPASy TrEMBL
Match: A0A6J1HK49 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN=LOC111464848 PE=3 SV=1)

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 170/223 (76.23%), Postives = 183/223 (82.06%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCL 60
           MD VS+  GGG SEG++ G +SA+A+  A AP SRYESQKRRDWNTFLQYLKNHKPPL L
Sbjct: 10  MDPVSKP-GGGPSEGSSAG-ASAAATTPAPAPASRYESQKRRDWNTFLQYLKNHKPPLSL 69

Query: 61  ARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 120
           ARCSGAHVIEFLKYLDQFGKTKVHAS CPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA
Sbjct: 70  ARCSGAHVIEFLKYLDQFGKTKVHASGCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRA 129

Query: 121 AYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATA---PPPETST 180
           AYEENGGRPESNPFAARAVRI+LREVREAQAKARGIPYEKKKRKR  A+A    P  T+ 
Sbjct: 130 AYEENGGRPESNPFAARAVRIFLREVREAQAKARGIPYEKKKRKRHAASASASAPAPTAA 189

Query: 181 SAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAAST 221
             +    T      ED+QPET+      DP+ APPPSTTAAST
Sbjct: 190 ILSVPPETHVVLAGEDHQPETS------DPSGAPPPSTTAAST 224

[Close]

BLAST of PI0017116 vs. NCBI nr
Match: XP_008457336.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-104
Identity = 204/225 (90.67%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSA----SASASAVAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSESGGGGASE T EGCSSA    +A+A+ VAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETS 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP  TAPPPETS
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPETS 180

Query: 181 TSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
           TS      TT TTTT DNQPETTAGGGGDDPAVAPPPSTTAAST+
Sbjct: 181 TS------TTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTS 219

[Close]

BLAST of PI0017116 vs. NCBI nr
Match: KAA0060022.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo var. makuwa])

HSP 1 Score: 389.4 bits (999), Expect = 2.1e-104
Identity = 204/225 (90.67%), Postives = 208/225 (92.44%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSA----SASASAVAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSVSESGGGGASE T EGCSSA    +A+A+ VAPPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVSESGGGGASESTGEGCSSATGTGTAAAAGVAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETS 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP  TAPPPETS
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPETS 180

Query: 181 TSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
           TS      TT TTTT DNQPETTAGGGGDDPAVAPPPSTTAAST+
Sbjct: 181 TS------TTATTTTGDNQPETTAGGGGDDPAVAPPPSTTAASTS 219

[Close]

BLAST of PI0017116 vs. NCBI nr
Match: XP_011648517.2 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 [Cucumis sativus] >KAE8653290.1 hypothetical protein Csa_023261 [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 1.7e-98
Identity = 201/229 (87.77%), Postives = 204/229 (89.08%), Query Frame = 0


Query: 1   MDSVSES-GGGGASEGTAEGCSSAS----ASASAVAPPSRYESQKRRDWNTFLQYLKNHK 60
           MDSVSES GGGGASE TAEGCSSA+       +AVAPPSRYESQKRRDWNTFLQYLKNHK
Sbjct: 1   MDSVSESGGGGGASESTAEGCSSATGGGGGGGAAVAPPSRYESQKRRDWNTFLQYLKNHK 60

Query: 61  PPLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALI 120
           PPLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALI
Sbjct: 61  PPLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALI 120

Query: 121 GRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPP-E 180
           GRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP  TAPPP E
Sbjct: 121 GRLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAPTAPPPAE 180

Query: 181 TSTSAAAAATTTTTTTTEDNQPETTA--GGGGDDPAVAPPPSTTAASTT 222
           TSTSA        TTT  DNQPETTA  GGGGDDPA+ PPPSTTAASTT
Sbjct: 181 TSTSA--------TTTPADNQPETTAGGGGGGDDPALPPPPSTTAASTT 221

[Close]

BLAST of PI0017116 vs. NCBI nr
Match: XP_038893975.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida])

HSP 1 Score: 351.3 bits (900), Expect = 6.2e-93
Identity = 189/226 (83.63%), Postives = 197/226 (87.17%), Query Frame = 0


Query: 1   MDSVSESGGGGASE-GTAEGCSSASASASA--VAPPSRYESQKRRDWNTFLQYLKNHKPP 60
           MDSVSE GGGGASE GTAEG S      SA   APPSRYESQKRRDWNTFLQYLKNHKPP
Sbjct: 1   MDSVSEPGGGGASEGGTAEGSSGGGGGGSAPTAAPPSRYESQKRRDWNTFLQYLKNHKPP 60

Query: 61  LCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120
           LCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGR
Sbjct: 61  LCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGR 120

Query: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP--TATAPPPET 180
           LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP  +A+APPP+ 
Sbjct: 121 LRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPAASASAPPPDP 180

Query: 181 STSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
                 + T+T+T    D+Q ETT+GGGGDDP  APPPSTTAASTT
Sbjct: 181 Q---VVSETSTSTAAAGDHQAETTSGGGGDDPTGAPPPSTTAASTT 223

[Close]

BLAST of PI0017116 vs. NCBI nr
Match: XP_022949557.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_022949558.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata])

HSP 1 Score: 318.9 bits (816), Expect = 3.4e-83
Identity = 177/227 (77.97%), Postives = 188/227 (82.82%), Query Frame = 0


Query: 1   MDSVSESGGGGASEGTAEGCSSAS----ASASAVAPPSRYESQKRRDWNTFLQYLKNHKP 60
           MDSV+ESGGGG+SE T EG S+      A+A+A APPSRYESQKRRDWNTFLQYLKNHKP
Sbjct: 1   MDSVTESGGGGSSEPTGEGSSAGGSAPLAAAAAAAPPSRYESQKRRDWNTFLQYLKNHKP 60

Query: 61  PLCLARCSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120
           PL LARCSGAHVIEFLKYLDQFGKTKVH S CPYFGHPNPPAPCPCPLKQAWGSLDALIG
Sbjct: 61  PLSLARCSGAHVIEFLKYLDQFGKTKVHGSGCPYFGHPNPPAPCPCPLKQAWGSLDALIG 120

Query: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTA--TAPPPE 180
           RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKR  A  + PPP 
Sbjct: 121 RLRAAYEENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRAAANVSVPPP- 180

Query: 181 TSTSAAAAATTTTTTTTEDNQPETTAGGGGDDPAVAPPPSTTAASTT 222
             T  + A ++++ T   D QPETTA G   D     PPSTTAASTT
Sbjct: 181 --TDVSLAGSSSSATVGADIQPETTAAG---DQTGDAPPSTTAASTT 221

[Close]

BLAST of PI0017116 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 261.2 bits (666), Expect = 7.8e-70
Identity = 130/161 (80.75%), Postives = 137/161 (85.09%), Query Frame = 0


Query: 6   ESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSG 65
           ES   G S+         S  +S  A PSRYESQKRRDWNTFLQYLKNHKPPL L+RCSG
Sbjct: 2   ESADSGRSDPVKGDDPGPSFVSSPPATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSG 61

Query: 66  AHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEEN 125
           AHVIEFLKYLDQFGKTKVH + CPYFGH  PP+PC CPLKQAWGSLDALIGRLRAAYEEN
Sbjct: 62  AHVIEFLKYLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEEN 121

Query: 126 GGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRP 167
           GGRP+SNPFAARAVRIYLREVRE+QAKARGIPYEKKKRKRP
Sbjct: 122 GGRPDSNPFAARAVRIYLREVRESQAKARGIPYEKKKRKRP 162

[Close]

BLAST of PI0017116 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 248.1 bits (632), Expect = 6.9e-66
Identity = 120/169 (71.01%), Postives = 140/169 (82.84%), Query Frame = 0


Query: 12  ASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEF 71
           A+  T    SS+S+  S     SRYE+QKRRDWNTF QYL+NH+PPL L+RCSGAHV+EF
Sbjct: 25  ATTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEF 84

Query: 72  LKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPES 131
           L+YLDQFGKTKVH   CP+FGHPNPPAPC CPL+QAWGSLDALIGRLRAA+EENGG PE+
Sbjct: 85  LRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPET 144

Query: 132 NPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETSTSAA 181
           NPF ARAVR+YLREVR++QAKARGI YEKKKRKRP    PP + + S++
Sbjct: 145 NPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPPPPLPPAQPAISSS 193

[Close]

BLAST of PI0017116 vs. TAIR 10
Match: AT5G58500.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 248.1 bits (632), Expect = 6.9e-66
Identity = 131/180 (72.78%), Postives = 148/180 (82.22%), Query Frame = 0


Query: 18  EGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQ 77
           EG ++A A+AS+ + PSRYESQKRRDWNTFLQYL+NHKPPL L+RCSGAHV+EFLKYLDQ
Sbjct: 2   EGETAAKAAASSSSSPSRYESQKRRDWNTFLQYLRNHKPPLNLSRCSGAHVLEFLKYLDQ 61

Query: 78  FGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEE-NGGRPESNPFAA 137
           FGKTKVHA+ CP+FG PNPP+ C CPLKQAWGSLDALIGRLRAA+EE  GG PESNPFAA
Sbjct: 62  FGKTKVHATACPFFGQPNPPSQCTCPLKQAWGSLDALIGRLRAAFEEIGGGLPESNPFAA 121

Query: 138 RAVRIYLREVREAQAKARGIPYEKKKRKRP-TATAPP-----PETSTSAAAAATTTTTTT 191
           +AVRIYL+EVR+ QAKARGIPY+KKKRKRP T TA P      +   S  AA   T  TT
Sbjct: 122 KAVRIYLKEVRQTQAKARGIPYDKKKRKRPHTDTATPIAGDGDDAEGSGGAALVVTAATT 181

[Close]

BLAST of PI0017116 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 241.5 bits (615), Expect = 6.4e-64
Identity = 124/181 (68.51%), Postives = 148/181 (81.77%), Query Frame = 0


Query: 3   SVSESGGGGASEGTAEGCSSASASASAVAPPSRYESQKRRDWNTFLQYLKNHKPPLCLAR 62
           S + S   GA+ G  E     S+S+S  A  SRYE+QKRRDWNTF QYL+NH+PPL L+R
Sbjct: 24  SNNSSSVTGATGG--EATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSR 83

Query: 63  CSGAHVIEFLKYLDQFGKTKVHASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAY 122
           CSGAHV+EFL+YLDQFGKTKVH + C ++GHPNPPAPCPCPL+QAWGSLDALIGRLRAA+
Sbjct: 84  CSGAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAF 143

Query: 123 EENGGRPESNPFAARAVRIYLREVREAQAKARGIPYEKKKRKRPTATAPPPETSTSAAAA 182
           EENGG+PE+NPF ARAVR+YLREVR+ Q+KARG+ YEKKKRKRP    P   TS+S+A A
Sbjct: 144 EENGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRP---LPSSSTSSSSAVA 199

Query: 183 A 184
           +
Sbjct: 204 S 199

[Close]

BLAST of PI0017116 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 228.4 bits (581), Expect = 5.6e-60
Identity = 108/152 (71.05%), Postives = 128/152 (84.21%), Query Frame = 0


Query: 26  SASAVAPP--SRYESQKRRDWNTFLQYLKNHKPPLCLARCSGAHVIEFLKYLDQFGKTKV 85
           S++ + PP  SRYE+QKRRDWNTF QYL+NH+PPL L  CSGAHV+EFL+YLDQFGKTKV
Sbjct: 14  SSTQLTPPSSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKV 73

Query: 86  HASPCPYFGHPNPPAPCPCPLKQAWGSLDALIGRLRAAYEENGGRPESNPFAARAVRIYL 145
           H   C +FG PNPPAPCPCPL+QAWGSLDALIGRLRAAYEENGG PE+NPF +RAVR++L
Sbjct: 74  HHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFL 133

Query: 146 REVREAQAKARGIPYEKKKR---KRPTATAPP 173
           REVR+ QAKARG+ YEKK++   ++   T PP
Sbjct: 134 REVRDFQAKARGVSYEKKRKRVNRQKPQTQPP 165

The following BLAST results are available for this feature:

BLAST of PI0017116 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XDD0	8.5e-69	75.71	Protein G1-like5 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L5 PE=1 SV=1	[more]
Q9LMK2	1.1e-68	80.75	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2XVI8	5.5e-68	74.55	Protein G1-like4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16643 PE=3 SV=1	[more]
Q7XRS1	5.5e-68	74.55	Protein G1-like4 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L4 PE=1 SV=2	[more]
B8AH02	1.2e-67	63.64	Protein G1-like3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_05696 PE=3 SV=1	[more]

BLAST of PI0017116 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVV8	9.9e-105	90.67	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3C5Y5	9.9e-105	90.67	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1GCE7	1.6e-83	77.97	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KEN4	2.2e-83	78.03	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1HK49	1.2e-78	76.23	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of PI0017116 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008457336.1	2.1e-104	90.67	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo]	[more]
KAA0060022.1	2.1e-104	90.67	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucumis melo var. makuwa]	[more]
XP_011648517.2	1.7e-98	87.77	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5 [Cucumis sativus] >KAE8653290.1 hypot...	[more]
XP_038893975.1	6.2e-93	83.63	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Benincasa hispida]	[more]
XP_022949557.1	3.4e-83	77.97	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Cucurbita moschata] >XP_0229495...	[more]

BLAST of PI0017116 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07090.1	7.8e-70	80.75	Protein of unknown function (DUF640)	[more]
AT3G23290.2	6.9e-66	71.01	Protein of unknown function (DUF640)	[more]
AT5G58500.1	6.9e-66	72.78	Protein of unknown function (DUF640)	[more]
AT2G31160.1	6.4e-64	68.51	Protein of unknown function (DUF640)	[more]
AT5G28490.1	5.6e-60	71.05	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 31..148 e-value: 1.1E-65 score: 219.5
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 35..162 score: 83.464706
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..223
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..168
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..37
None	No IPR available	PANTHER	PTHR31165:SF59	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6	coord: 9..199
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 9..199

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017116.1	PI0017116.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus