PI0017103 (gene) Melon (PI 482460) v1

Overview


Name	PI0017103
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Wound-responsive family protein
Location	chr01: 2925502 .. 2926068 (-)
RNA-Seq Expression	PI0017103
Synteny	PI0017103

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTATTCCAAAGGCTGCGACCGCCTCTGTATAAAAACCACCTCCACTATCCCACGCTTCACAATCAAATTTCACCAACAAAATTTAAATTCAAAACCCATTGTAGAGAGAAGAAAATACAAAATGAGTTCACCAACAAGAGCGTTGATTGTAGCGGCCACCGTCGGCGTTGTGGAGGCACTTAAGGATCAAGGAATTTGCCGGTGGAATCATGTCTTAAGATCGGCGCATCACTACGCCAGAAACCATGTTGGGTCTATTTCTCAGGCTAAGAAGTTCTCCTCCGCCGTGTCTTCCACCAACCGCCTCCAACAGTCCGAGGAATCTCTCAGAACGGTGATGTATCTTAGCTGTTGGGGTCCTAATAACTAAACCCACCTGCATCATCTATCCAGATACTCCGGTTGGACCGGCGGCGGTTCGAGCGAAAAAAAGATACTGCTGTCCGGTTTTGGAGCACTTGAGCTCACTTTATCTTCCTCCCTTCATCAGTTTGTAATTGTAATTAAATGTTTAATGGAGGATTTGGGAGTCTGATTCTTTCAACAATTGTAAAACCAATATTTCC

mRNA sequence

TCTATTCCAAAGGCTGCGACCGCCTCTGTATAAAAACCACCTCCACTATCCCACGCTTCACAATCAAATTTCACCAACAAAATTTAAATTCAAAACCCATTGTAGAGAGAAGAAAATACAAAATGAGTTCACCAACAAGAGCGTTGATTGTAGCGGCCACCGTCGGCGTTGTGGAGGCACTTAAGGATCAAGGAATTTGCCGGTGGAATCATGTCTTAAGATCGGCGCATCACTACGCCAGAAACCATGTTGGGTCTATTTCTCAGGCTAAGAAGTTCTCCTCCGCCGTGTCTTCCACCAACCGCCTCCAACAGTCCGAGGAATCTCTCAGAACGGTGATGTATCTTAGCTGTTGGGGTCCTAATAACTAAACCCACCTGCATCATCTATCCAGATACTCCGGTTGGACCGGCGGCGGTTCGAGCGAAAAAAAGATACTGCTGTCCGGTTTTGGAGCACTTGAGCTCACTTTATCTTCCTCCCTTCATCAGTTTGTAATTGTAATTAAATGTTTAATGGAGGATTTGGGAGTCTGATTCTTTCAACAATTGTAAAACCAATATTTCC

Coding sequence (CDS)

ATGAGTTCACCAACAAGAGCGTTGATTGTAGCGGCCACCGTCGGCGTTGTGGAGGCACTTAAGGATCAAGGAATTTGCCGGTGGAATCATGTCTTAAGATCGGCGCATCACTACGCCAGAAACCATGTTGGGTCTATTTCTCAGGCTAAGAAGTTCTCCTCCGCCGTGTCTTCCACCAACCGCCTCCAACAGTCCGAGGAATCTCTCAGAACGGTGATGTATCTTAGCTGTTGGGGTCCTAATAACTAA

Protein sequence

MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTNRLQQSEESLRTVMYLSCWGPNN

Homology

[Close]

BLAST of PI0017103 vs. ExPASy TrEMBL
Match: A0A5D3C9S0 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003740 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRALIVAATVGVVEALKDQGICRWNH+LRSAHHYARNHVGSISQAKKFSSAVSS N
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. ExPASy TrEMBL
Match: A0A1S3C1Y6 (uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.6e-36
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRALIVAATVGVVEALKDQGICRWNH+LRSAHHYARNHVGSISQAKKFSSAVSS N
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. ExPASy TrEMBL
Match: A0A0A0K5N2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046650 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-35
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRAL VAATVGVVEALKDQGICRWNH+LRSAHHYARNHVGS+SQAKKFSSAVSS N
Sbjct: 1  MSSSTRALFVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. ExPASy TrEMBL
Match: A0A5D3C5F5 (Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003750 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV S N
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. ExPASy TrEMBL
Match: A0A0A0K6Y8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.7e-33
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV S N
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. NCBI nr
Match: XP_008455358.1 (PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo] >KAA0031604.1 Wound-responsive family protein [Cucumis melo var. makuwa] >TYK07056.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 160.2 bits (404), Expect = 7.4e-36
Identity = 79/82 (96.34%), Postives = 80/82 (97.56%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRALIVAATVGVVEALKDQGICRWNH+LRSAHHYARNHVGSISQAKKFSSAVSS N
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. NCBI nr
Match: XP_004136807.1 (uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical protein Csa_020183 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 3.7e-35
Identity = 77/82 (93.90%), Postives = 79/82 (96.34%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRAL VAATVGVVEALKDQGICRWNH+LRSAHHYARNHVGS+SQAKKFSSAVSS N
Sbjct: 1  MSSSTRALFVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          RLQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. NCBI nr
Match: XP_004136808.1 (uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED: uncharacterized protein LOC103495545 [Cucumis melo] >KAA0031605.1 Wound-responsive family protein [Cucumis melo var. makuwa] >KGN43576.1 hypothetical protein Csa_020502 [Cucumis sativus] >TYK07057.1 Wound-responsive family protein [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 7.7e-33
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV S N
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. NCBI nr
Match: XP_023554653.1 (uncharacterized protein LOC111811841 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 71/84 (84.52%), Postives = 77/84 (91.67%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSST- 60
          MSS TRALIVAA+VGVVEALKDQGICRWNH++RSAHHYA+NHVGSISQAKKFSSAV+   
Sbjct: 1  MSSSTRALIVAASVGVVEALKDQGICRWNHLIRSAHHYAKNHVGSISQAKKFSSAVAPAP 60

Query: 61 -NRLQQSEESLRTVMYLSCWGPNN 83
            +L QSEESLRTVMYLSCWGPNN
Sbjct: 61 GKQLHQSEESLRTVMYLSCWGPNN 84

[Close]

BLAST of PI0017103 vs. NCBI nr
Match: XP_038888472.1 (uncharacterized protein LOC120078309 [Benincasa hispida])

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 69/82 (84.15%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTN 60
          MSS TR L+VAATVGVVEALKDQGICRWNH+LRS HHYARNHV SISQAKK SS V S N
Sbjct: 1  MSSSTRTLVVAATVGVVEALKDQGICRWNHLLRSTHHYARNHVRSISQAKKLSSTVPSAN 60

Query: 61 RLQQSEESLRTVMYLSCWGPNN 83
           L++SEESLRTVMYLSCWGPNN
Sbjct: 61 HLRRSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of PI0017103 vs. TAIR 10
Match: AT4G10265.1 (Wound-responsive family protein )

HSP 1 Score: 105.9 bits (263), Expect = 1.6e-23
Identity = 52/83 (62.65%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQ-GICRWNHVLRSAHHYARNHVGSISQAKKF-SSAVSS 60
          MSS ++  +VAA++G VEALKDQ G+CRWN+V+RSA+ Y RN++ S+SQAKK  SS++  
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 TNRLQQSEESLRTVMYLSCWGPN 82
          TN+ +Q+EESLRTVMYLSCWGP+
Sbjct: 61 TNKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of PI0017103 vs. TAIR 10
Match: AT4G10270.1 (Wound-responsive family protein )

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-20
Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 0


Query: 1  MSSPTRALIVAATVGVVEALKDQ-GICRWNHVLRSAHHYARNHVGSISQAKKFSS----- 60
          MSS ++A  VA ++G VEALKDQ G+CRWN++LRS + + RN+V S+SQ K+FSS     
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 AVSS---TNRLQQSEESLRTVMYLSCWGPN 82
          AV+S   + + +++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of PI0017103 vs. TAIR 10
Match: AT4G33560.1 (Wound-responsive family protein )

HSP 1 Score: 45.8 bits (107), Expect = 1.9e-05
Identity = 28/80 (35.00%), Postives = 38/80 (47.50%), Query Frame = 0


Query: 10 VAATVGVVEALKDQGICRWNHVLRSAHHYARNHVGSISQAKKFSSAVSSTNRLQ------ 69
          VA  +  VE LKDQG+ RWN++ R  H  A   V +I+   + S   SS++         
Sbjct: 11 VATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPL 70

Query: 70 ---QSEESLRTVMYLSCWGP 81
               E S    M LSC+GP
Sbjct: 71 STTPFETSFEKAMGLSCFGP 90

[Close]

BLAST of PI0017103 vs. TAIR 10
Match: AT4G05070.1 (Wound-responsive family protein )

HSP 1 Score: 41.2 bits (95), Expect = 4.7e-04
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0


Query: 48 QAKKFSSAVSSTNRLQQSEESLRTVMYLSCWG 80
          ++ +F +A S   RL+Q+EESLRTVM+LSCWG
Sbjct: 56 ESSRFGAAAS--ERLRQAEESLRTVMFLSCWG 85

The following BLAST results are available for this feature:

BLAST of PI0017103 vs.


Match Name	E-value	Identity	Description

BLAST of PI0017103 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C9S0	3.6e-36	96.34	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3C1Y6	3.6e-36	96.34	uncharacterized protein LOC103495544 OS=Cucumis melo OX=3656 GN=LOC103495544 PE=...	[more]
A0A0A0K5N2	1.8e-35	93.90	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046650 PE=4 SV=1	[more]
A0A5D3C5F5	3.7e-33	90.24	Wound-responsive family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0K6Y8	3.7e-33	90.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046640 PE=4 SV=1	[more]

BLAST of PI0017103 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455358.1	7.4e-36	96.34	PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo] >KAA0031604.1 Wou...	[more]
XP_004136807.1	3.7e-35	93.90	uncharacterized protein LOC101222779 [Cucumis sativus] >KGN43577.1 hypothetical ...	[more]
XP_004136808.1	7.7e-33	90.24	uncharacterized protein LOC101223015 [Cucumis sativus] >XP_008455359.1 PREDICTED...	[more]
XP_023554653.1	2.1e-30	84.52	uncharacterized protein LOC111811841 [Cucurbita pepo subsp. pepo]	[more]
XP_038888472.1	2.1e-30	84.15	uncharacterized protein LOC120078309 [Benincasa hispida]	[more]

BLAST of PI0017103 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10265.1	1.6e-23	62.65	Wound-responsive family protein	[more]
AT4G10270.1	1.2e-20	56.67	Wound-responsive family protein	[more]
AT4G33560.1	1.9e-05	35.00	Wound-responsive family protein	[more]
AT4G05070.1	4.7e-04	59.38	Wound-responsive family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..80 e-value: 2.4E-32 score: 111.8
IPR022251	Protein of unknown function wound-induced	PANTHER	PTHR33090	DUF3774 DOMAIN PROTEIN-RELATED	coord: 1..81
None	No IPR available	PANTHER	PTHR33090:SF56	WOUND-RESPONSIVE FAMILY PROTEIN	coord: 1..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0017103.1	PI0017103.1	mRNA