PI0016991 (gene) Melon (PI 482460) v1

Overview
NamePI0016991
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr01: 1340375 .. 1340680 (+)
RNA-Seq ExpressionPI0016991
SyntenyPI0016991
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTACAAAGTCATTAGTCTGGTGGCTCAGATTTTGCGTCGTTCTATTTCAATTGTCTTCTTCCGGATTTGTGTTGGATTGCATGTCCGATTGCAGCCATTGCCATGGCCGCAGAAATGGACACGTAAAACATTGCTAGCCTTTCTGGGGTCTCCGCTTATTCCACTTTCCAACTCAAGTTACCATTCTATCTTCCCAATTTCTCTCGCTGCATTCCAAGTTCTCCCAATGTCAATTCCTTTCTTACAATTCAAAATCCCCCAAATCTTTGGAACGTGGGTATTTTTTGGCCTCAGATGTTGA

mRNA sequence

ATGGATTACAAAGTCATTAGTCTGGTGGCTCAGATTTTGCGTCGTTCTATTTCAATTGTCTTCTTCCGGATTTGTGTTGGATTGCATGTCCGATTGCAGCCATTGCCATGGCCGCAGAAATGGACACGTAAAACATTGCTAGCCTTTCTGGGGTCTCCGCTTATTCCACTTTCCAACTCAAGTTACCATTCTATCTTCCCAATTTCTCTCGCTGCATTCCAAGTTCTCCCAATGTCAATTCCTTTCTTACAATTCAAAATCCCCCAAATCTTTGGAACGTGGGTATTTTTTGGCCTCAGATGTTGA

Coding sequence (CDS)

ATGGATTACAAAGTCATTAGTCTGGTGGCTCAGATTTTGCGTCGTTCTATTTCAATTGTCTTCTTCCGGATTTGTGTTGGATTGCATGTCCGATTGCAGCCATTGCCATGGCCGCAGAAATGGACACGTAAAACATTGCTAGCCTTTCTGGGGTCTCCGCTTATTCCACTTTCCAACTCAAGTTACCATTCTATCTTCCCAATTTCTCTCGCTGCATTCCAAGTTCTCCCAATGTCAATTCCTTTCTTACAATTCAAAATCCCCCAAATCTTTGGAACGTGGGTATTTTTTGGCCTCAGATGTTGA

Protein sequence

MDYKVISLVAQILRRSISIVFFRICVGLHVRLQPLPWPQKWTRKTLLAFLGSPLIPLSNSSYHSIFPISLAAFQVLPMSIPFLQFKIPQIFGTWVFFGLRC
Homology
[Close]
BLAST of PI0016991 vs. ExPASy TrEMBL
Match: A0A0A0K675 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067520 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 4.9e-43
Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0 

Query: 1   MDYKVISLVAQILRRSISIVFFRICVGLHVRLQPLPWPQKWTRKTLLAFLGSPLIPLSNS 60
           MD +V+SLVAQILRRSISIVFFRIC+ LHVRLQPLPWPQKWTRKTLLAFLGS LI +SNS
Sbjct: 1   MDDRVMSLVAQILRRSISIVFFRICIRLHVRLQPLPWPQKWTRKTLLAFLGSLLILISNS 60

Query: 61  SYHSIFPISLAAFQVLPMSIPFLQFKIPQIFGTWVFFGLRC 102
           ++HSIFPISLAAFQ+LPMSIPFLQFKIPQIFGTWVFFGLRC
Sbjct: 61  NFHSIFPISLAAFQLLPMSIPFLQFKIPQIFGTWVFFGLRC 101

[Close]
BLAST of PI0016991 vs. NCBI nr
Match: KGN43797.1 (hypothetical protein Csa_017137 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 1.0e-42
Identity = 90/101 (89.11%), Postives = 97/101 (96.04%), Query Frame = 0 

Query: 1   MDYKVISLVAQILRRSISIVFFRICVGLHVRLQPLPWPQKWTRKTLLAFLGSPLIPLSNS 60
           MD +V+SLVAQILRRSISIVFFRIC+ LHVRLQPLPWPQKWTRKTLLAFLGS LI +SNS
Sbjct: 1   MDDRVMSLVAQILRRSISIVFFRICIRLHVRLQPLPWPQKWTRKTLLAFLGSLLILISNS 60

Query: 61  SYHSIFPISLAAFQVLPMSIPFLQFKIPQIFGTWVFFGLRC 102
           ++HSIFPISLAAFQ+LPMSIPFLQFKIPQIFGTWVFFGLRC
Sbjct: 61  NFHSIFPISLAAFQLLPMSIPFLQFKIPQIFGTWVFFGLRC 101

The following BLAST results are available for this feature:
BLAST of PI0016991 vs.
Match NameE-valueIdentityDescription
BLAST of PI0016991 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6754.9e-4389.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G067520 PE=4 SV=1[more]
BLAST of PI0016991 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN43797.11.0e-4289.11hypothetical protein Csa_017137 [Cucumis sativus][more]
BLAST of PI0016991 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016991.1PI0016991.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane