PI0016976 (gene) Melon (PI 482460) v1

Overview
NamePI0016976
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
Description40S ribosomal protein S29-like
Locationchr01: 914862 .. 917206 (+)
RNA-Seq ExpressionPI0016976
SyntenyPI0016976
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAAAGAATGCCAAAATAGTTTCGAAGCTAGGGTTTCGTCTCACCTCTCCCCTATAAATACTTAATTTTTCTCTTTGGTTGGTTCTTCAGAAAGCATTTACCTCTTCATAAGATTTTCGAAGCCTTAACGAGCTCATCAGATTTCCTTCTCGCAAGCCATCCAAACATGGGGCACTCGAACGTCTGGAATTCGCACCCTAAGAACTACGGTCCCGGCTCTCGCACCTGGTAACTTATTTTCTTTTGAGATGATTCCGATTTCATTTAGCTGATTTTTTCTATCTGTCATACAAGATTCCATCTTTTGCTTAAAAACATGGTTATTTACTTGTATTACTGGGTTGGAAATTGGAATCTGGGTCTTGTTATTCTGATGGGGTGTTTTAAACTTGAGAGAAGAATCATGTCATTGGTTTCGACTTTTGAGCTGGACACAGTTCGAAGAAGCTATTTTTTCATGTTTCTTTGATGTATGAACGCAAGTGTAAGGGCATACGTTGAGTTCCGGTCCAGCCATCAGGATTGAACCCATCACCTCTTAGCTATCCATTAGGAGAAGATATTGTGGAATAGTTTCCAAATGTTTTTCTAGTTGTGTCTACTGTTTGTTTTAATTGATTGAGCAAACGATTATCAGTTTCTTTTGATATGAGAATTTTAGTGAAATTGCCCATGAACCCCTTTTTGTTGTGCCCATGGTTGGATAGTTTTCTGTATAAATTATTCTGGGTTGTAGTTGTGATGTTAAGAAGTTCTTAGTAATTGCTCATGAATTCCTTATGTTGTTTGTTGCCATTGGTTGACCTAAAATGTAAGTTCAGTATGTTGAATCAGAATATGGATGTTCAGTTGGATAATGAGATGAATTAAATGATTGATTAGATGTTTTGGTTTTCATGATCGAGTTTAATGAAGGTTCCACGATTCGACTGTTTTCTGTCTAAGTTGTGCTGGGTTGCAGTTGTGATGTTGATGAAGTGTTAAGAAGTTCTTAGTAATTGTTTATGAATCCCTATGTTGTTTGTGGCTATTAGTTGAATTAAAAAATTTAAGTTCAGTATGTTGAACCTGAAGCAGAATGTTCAGTTGGATAATGAGATGAAGTCTTGTGTATATGGATACATTTGGTTGGTTTAATATTTATTCAGAACTATGATGTGACGGTCCTTTTCTGCTTGAATTAAAACGTTCTCTGTATTTCTTGCATTTTCTTGTAGCCGGGTTTGCGGAAATCCTCATGGTTTGATCAGAAAGTATGGACTTATGTGCTGCAGACAGTGCTTCCGTAGCAACGCCAAGGAAATTGGATTCATCAAGGTGAAAATTTTACATTTTTATCTATCTGATCACCTATTTTGTTTGAACTATATCCACATCAAAGCTTCTTGATTGTCTTCTGAGTTCTGACCCCTTGAATCTCAACTCTTCTTGCAGTACCGCTAAATGGCCAAATTTTTGTCTCTCTCATTAGAGGTGTAATGGATGGATTATGTTAGCAGCATTTTCATATATATATAAGACAGAACCTTGAACTTTCATTTTATGTCCCTAGTTCATTTTTTTACTTGAACCATGAGTTGATTGTTGAACTTTAGGCGCCTACGATGTTTTACTAATTTTGAAGATCTAAGTTGATGTTTCTTCATTCGGTACCGTGCTCTTGTTTTTTACCCTCTTTTCTTTTACTCTTTGTCAAATGGTAACATCTCCTTGTTTGATGTATGGATTAAAGTTTATAGATCGAGTTAACAATCGTGCTTATCCTTCGGCTGACAGGTCAAATGCCAATTCAAATAGAAGGTTTAAGTCATAGTGACTACGAACTTGGTATTTAATATTATAAAGAGTAACTATGATGGTTCAATAGATATATGGAAGAAATTATAGGTTTAGCCATACCATTATGGTATAGGTCAGGCTTACACTCTACTACTGATAGGTTTGTCTACTATTATGGTACTTCAAAATGGTCCCATTAGACATTAAAACATGTTCAATTTGGTCTGAAATCTGGTCTTGTTTGAATTTATTAACTATGTTCTCTCTGGTGGTAGTTTGTTCATATTTATGAGGATTGTAATATTGGTCGCTAGGTTGAGATTATGCTGGAGGGTTCGATAGCAACTTGTTTTGCCGACATTTTGTGCAGTCAAGTTTCTTTTCTTCTTCTCATAGCTTGGTAAAATTTTTGATAAATTCCTCTTTCATTATATCTAGGCACAGTTGGGGGTGGCGTTTTGGTTTATTCTGTTTGGTTTGATTTGTTTATAAGTTCAACTTTTCAATCTAGCATTTGAAATTCCATGTATATTTATAGGCAAAAAATTTAATTTACTCAATTTTGT

mRNA sequence

GAAAAGAATGCCAAAATAGTTTCGAAGCTAGGGTTTCGTCTCACCTCTCCCCTATAAATACTTAATTTTTCTCTTTGGTTGGTTCTTCAGAAAGCATTTACCTCTTCATAAGATTTTCGAAGCCTTAACGAGCTCATCAGATTTCCTTCTCGCAAGCCATCCAAACATGGGGCACTCGAACGTCTGGAATTCGCACCCTAAGAACTACGGTCCCGGCTCTCGCACCTGCCGGGTTTGCGGAAATCCTCATGGTTTGATCAGAAAGTATGGACTTATGTGCTGCAGACAGTGCTTCCGTAGCAACGCCAAGGAAATTGGATTCATCAAGTACCGCTAAATGGCCAAATTTTTGTCTCTCTCATTAGAGGTGTAATGGATGGATTATGTTAGCAGCATTTTCATATATATATAAGACAGAACCTTGAACTTTCATTTTATGTCCCTAGTTCATTTTTTTACTTGAACCATGAGTTGATTGTTGAACTTTAGGCGCCTACGATGTTTTACTAATTTTGAAGATCTAAGTTGATGTTTCTTCATTCGGTACCGTGCTCTTGTTTTTTACCCTCTTTTCTTTTACTCTTTGTCAAATGGTAACATCTCCTTGTTTGATGTATGGATTAAAGTTTATAGATCGAGTTAACAATCGTGCTTATCCTTCGGCTGACAGGTCAAATGCCAATTCAAATAGAAGGTTTAAGTCATAGTGACTACGAACTTGGTATTTAATATTATAAAGAGTAACTATGATGGTTCAATAGATATATGGAAGAAATTATAGGTTTAGCCATACCATTATGGTATAGGTCAGGCTTACACTCTACTACTGATAGGTTTGTCTACTATTATGGTACTTCAAAATGGTCCCATTAGACATTAAAACATGTTCAATTTGGTCTGAAATCTGGTCTTGTTTGAATTTATTAACTATGTTCTCTCTGGTGGTAGTTTGTTCATATTTATGAGGATTGTAATATTGGTCGCTAGGTTGAGATTATGCTGGAGGGTTCGATAGCAACTTGTTTTGCCGACATTTTGTGCAGTCAAGTTTCTTTTCTTCTTCTCATAGCTTGGTAAAATTTTTGATAAATTCCTCTTTCATTATATCTAGGCACAGTTGGGGGTGGCGTTTTGGTTTATTCTGTTTGGTTTGATTTGTTTATAAGTTCAACTTTTCAATCTAGCATTTGAAATTCCATGTATATTTATAGGCAAAAAATTTAATTTACTCAATTTTGT

Coding sequence (CDS)

ATGGGGCACTCGAACGTCTGGAATTCGCACCCTAAGAACTACGGTCCCGGCTCTCGCACCTGCCGGGTTTGCGGAAATCCTCATGGTTTGATCAGAAAGTATGGACTTATGTGCTGCAGACAGTGCTTCCGTAGCAACGCCAAGGAAATTGGATTCATCAAGTACCGCTAA

Protein sequence

MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Homology
[Close]
BLAST of PI0016976 vs. ExPASy Swiss-Prot
Match: Q680P8 (40S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2)

HSP 1 Score: 121.3 bits (303), Expect = 3.4e-27
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy Swiss-Prot
Match: Q5I7K3 (40S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 5.9e-27
Identity = 51/56 (91.07%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYG GSR CRVCGN HGLIRKYGLMCCRQCFRS+AK+IGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGAGSRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy Swiss-Prot
Match: Q7XYB0 (40S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.4e-20
Identity = 39/56 (69.64%), Postives = 46/56 (82.14%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGH N+W SHP+ YG GSR+C++CGN HGLIRKY +  CRQCFR  AK+IGFIKYR
Sbjct: 1  MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy Swiss-Prot
Match: Q4PM47 (40S ribosomal protein S29 OS=Ixodes scapularis OX=6945 GN=RpS29 PE=3 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 3.8e-18
Identity = 38/54 (70.37%), Postives = 42/54 (77.78%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIK 55
          MGH N+W SHP+ YGPGSR CRVC N HGLIRKYGL  CR+CFR  A +IGF K
Sbjct: 1  MGHENIWYSHPRKYGPGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54

[Close]
BLAST of PI0016976 vs. ExPASy Swiss-Prot
Match: Q757G1 (40S ribosomal protein S29 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=RPS29 PE=3 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 6.5e-18
Identity = 39/56 (69.64%), Postives = 42/56 (75.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          M H NVW SHP+NYG GSR CRVC +  GLIRKYGL  CRQCFR  A +IGF KYR
Sbjct: 1  MAHENVWFSHPRNYGKGSRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy TrEMBL
Match: A0A1S3V2W1 (40S ribosomal protein S29 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771251 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.4e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy TrEMBL
Match: A0A2G9HKH9 (40S ribosomal protein S29 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06837 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.4e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy TrEMBL
Match: A0A6J5Y987 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS50761 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.4e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy TrEMBL
Match: A0A1S3BZQ2 (40S ribosomal protein S29 OS=Cucumis melo OX=3656 GN=LOC103494802 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.4e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. ExPASy TrEMBL
Match: A0A2P5DND1 (Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_048520 PE=3 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.4e-28
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. NCBI nr
Match: XP_002271801.1 (PREDICTED: 40S ribosomal protein S29 [Vitis vinifera] >XP_002277856.1 PREDICTED: 40S ribosomal protein S29 [Vitis vinifera] >XP_002510113.1 40S ribosomal protein S29 [Ricinus communis] >XP_003517600.1 40S ribosomal protein S29 isoform X2 [Glycine max] >XP_003536587.1 40S ribosomal protein S29 [Glycine max] >XP_003537955.1 40S ribosomal protein S29 [Glycine max] >XP_003555985.1 40S ribosomal protein S29 [Glycine max] >XP_004136942.1 40S ribosomal protein S29 [Cucumis sativus] >XP_004141284.1 40S ribosomal protein S29 [Cucumis sativus] >XP_004152273.1 40S ribosomal protein S29 [Cucumis sativus] >XP_008236441.1 PREDICTED: 40S ribosomal protein S29 [Prunus mume] >XP_008366503.1 40S ribosomal protein S29 [Malus domestica] >XP_008373047.1 40S ribosomal protein S29 [Malus domestica] >XP_008452633.1 PREDICTED: 40S ribosomal protein S29 [Cucumis melo] >XP_008454386.1 PREDICTED: 40S ribosomal protein S29 [Cucumis melo] >XP_008455027.1 PREDICTED: 40S ribosomal protein S29 [Cucumis melo] >XP_009335389.1 PREDICTED: 40S ribosomal protein S29 [Pyrus x bretschneideri] >XP_009335391.1 PREDICTED: 40S ribosomal protein S29 [Pyrus x bretschneideri] >XP_009335395.1 PREDICTED: 40S ribosomal protein S29 [Pyrus x bretschneideri] >XP_009335396.1 PREDICTED: 40S ribosomal protein S29 [Pyrus x bretschneideri] >XP_012068241.1 40S ribosomal protein S29 [Jatropha curcas] >XP_014512686.1 40S ribosomal protein S29 [Vigna radiata var. radiata] >XP_014520214.1 40S ribosomal protein S29 [Vigna radiata var. radiata] >XP_015579872.1 40S ribosomal protein S29 [Ricinus communis] >XP_016177041.1 40S ribosomal protein S29 [Arachis ipaensis] >XP_017406681.1 PREDICTED: 40S ribosomal protein S29 [Vigna angularis] >XP_017413940.1 PREDICTED: 40S ribosomal protein S29 [Vigna angularis] >XP_020425405.1 40S ribosomal protein S29 [Prunus persica] >XP_021832790.1 40S ribosomal protein S29 [Prunus avium] >XP_022137207.1 40S ribosomal protein S29 [Momordica charantia] >XP_022148695.1 40S ribosomal protein S29 [Momordica charantia] >XP_022149134.1 40S ribosomal protein S29 [Momordica charantia] >XP_025620437.1 40S ribosomal protein S29 [Arachis hypogaea] >XP_025674414.1 40S ribosomal protein S29 [Arachis hypogaea] >XP_027913948.1 40S ribosomal protein S29 [Vigna unguiculata] >XP_027934884.1 40S ribosomal protein S29 [Vigna unguiculata] >XP_028181298.1 40S ribosomal protein S29 [Glycine soja] >XP_028183031.1 40S ribosomal protein S29 [Glycine soja] >XP_028188152.1 40S ribosomal protein S29 [Glycine soja] >XP_028220265.1 40S ribosomal protein S29 [Glycine soja] >XP_028767707.1 40S ribosomal protein S29 [Prosopis alba] >XP_028778046.1 40S ribosomal protein S29 [Prosopis alba] >XP_028778674.1 40S ribosomal protein S29 [Prosopis alba] >XP_028792178.1 40S ribosomal protein S29 [Prosopis alba] >XP_031274068.1 40S ribosomal protein S29-like [Pistacia vera] >XP_034228266.1 40S ribosomal protein S29 [Prunus dulcis] >XP_034695515.1 40S ribosomal protein S29-like [Vitis riparia] >XP_034699065.1 40S ribosomal protein S29-like [Vitis riparia] >XP_038888968.1 40S ribosomal protein S29 [Benincasa hispida] >XP_038905306.1 40S ribosomal protein S29 [Benincasa hispida] >KAA0044347.1 40S ribosomal protein S29-like [Cucumis melo var. makuwa] >KAB2636002.1 40S ribosomal protein S29-like [Pyrus ussuriensis x Pyrus communis] >KAG8632674.1 hypothetical protein MANES_18G044866v8 [Manihot esculenta] >OIW07926.1 hypothetical protein TanjilG_20027 [Lupinus angustifolius] >PIM99804.1 40S ribosomal protein S29 [Handroanthus impetiginosus] >PON54305.1 Ribosomal protein [Trema orientale] >PON66003.1 Ribosomal protein [Parasponia andersonii] >CAB4290660.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 131.7 bits (330), Expect = 1.9e-27
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. NCBI nr
Match: XP_011078121.1 (40S ribosomal protein S29 [Sesamum indicum] >XP_011088056.1 40S ribosomal protein S29 [Sesamum indicum] >XP_011092516.1 40S ribosomal protein S29 [Sesamum indicum] >XP_011093855.1 40S ribosomal protein S29 [Sesamum indicum])

HSP 1 Score: 131.3 bits (329), Expect = 2.5e-27
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSN+WNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNIWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. NCBI nr
Match: XP_015866898.1 (40S ribosomal protein S29 [Ziziphus jujuba] >XP_015892836.1 40S ribosomal protein S29 [Ziziphus jujuba])

HSP 1 Score: 131.0 bits (328), Expect = 3.3e-27
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGIMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. NCBI nr
Match: XP_015866899.1 (40S ribosomal protein S29 [Ziziphus jujuba] >XP_015892835.1 40S ribosomal protein S29 [Ziziphus jujuba] >XP_024461959.1 40S ribosomal protein S29 [Populus trichocarpa] >XP_024463998.1 40S ribosomal protein S29 [Populus trichocarpa] >XP_034923293.1 40S ribosomal protein S29 [Populus alba] >PNT20416.1 hypothetical protein POPTR_009G090000 [Populus trichocarpa])

HSP 1 Score: 131.0 bits (328), Expect = 3.3e-27
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHG+IRKYGLMCCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGIIRKYGLMCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. NCBI nr
Match: XP_015889056.1 (40S ribosomal protein S29-like [Ziziphus jujuba])

HSP 1 Score: 131.0 bits (328), Expect = 3.3e-27
Identity = 55/56 (98.21%), Postives = 56/56 (100.00%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYG+MCCRQCFRSNAKEIGFIKYR
Sbjct: 37 MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGIMCCRQCFRSNAKEIGFIKYR 92

[Close]
BLAST of PI0016976 vs. TAIR 10
Match: AT3G43980.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. TAIR 10
Match: AT3G44010.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

[Close]
BLAST of PI0016976 vs. TAIR 10
Match: AT4G33865.1 (Ribosomal protein S14p/S29e family protein )

HSP 1 Score: 121.3 bits (303), Expect = 2.4e-28
Identity = 52/56 (92.86%), Postives = 52/56 (92.86%), Query Frame = 0 

Query: 1  MGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 57
          MGHSNVWNSHPK YGPGSR CRVCGN HGLIRKYGL CCRQCFRSNAKEIGFIKYR
Sbjct: 1  MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56

The following BLAST results are available for this feature:
BLAST of PI0016976 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q680P83.4e-2792.8640S ribosomal protein S29 OS=Arabidopsis thaliana OX=3702 GN=RPS29A PE=3 SV=2[more]
Q5I7K35.9e-2791.0740S ribosomal protein S29 OS=Triticum aestivum OX=4565 GN=RPS29 PE=1 SV=1[more]
Q7XYB02.4e-2069.6440S ribosomal protein S29 OS=Griffithsia japonica OX=83288 GN=RPS29 PE=3 SV=1[more]
Q4PM473.8e-1870.3740S ribosomal protein S29 OS=Ixodes scapularis OX=6945 GN=RpS29 PE=3 SV=1[more]
Q757G16.5e-1869.6440S ribosomal protein S29 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / F... [more]
BLAST of PI0016976 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3V2W19.4e-28100.0040S ribosomal protein S29 OS=Vigna radiata var. radiata OX=3916 GN=LOC106771251 ... [more]
A0A2G9HKH99.4e-28100.0040S ribosomal protein S29 OS=Handroanthus impetiginosus OX=429701 GN=CDL12_06837... [more]
A0A6J5Y9879.4e-28100.00Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS50761 PE=3 S... [more]
A0A1S3BZQ29.4e-28100.0040S ribosomal protein S29 OS=Cucumis melo OX=3656 GN=LOC103494802 PE=3 SV=1[more]
A0A2P5DND19.4e-28100.00Ribosomal protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_048520 PE=3 SV=... [more]
BLAST of PI0016976 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_002271801.11.9e-27100.00PREDICTED: 40S ribosomal protein S29 [Vitis vinifera] >XP_002277856.1 PREDICTED:... [more]
XP_011078121.12.5e-2798.2140S ribosomal protein S29 [Sesamum indicum] >XP_011088056.1 40S ribosomal protei... [more]
XP_015866898.13.3e-2798.2140S ribosomal protein S29 [Ziziphus jujuba] >XP_015892836.1 40S ribosomal protei... [more]
XP_015866899.13.3e-2798.2140S ribosomal protein S29 [Ziziphus jujuba] >XP_015892835.1 40S ribosomal protei... [more]
XP_015889056.13.3e-2798.2140S ribosomal protein S29-like [Ziziphus jujuba][more]
BLAST of PI0016976 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G43980.12.4e-2892.86Ribosomal protein S14p/S29e family protein [more]
AT3G44010.12.4e-2892.86Ribosomal protein S14p/S29e family protein [more]
AT4G33865.12.4e-2892.86Ribosomal protein S14p/S29e family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001209Ribosomal protein S14PFAMPF00253Ribosomal_S14coord: 7..56
e-value: 2.9E-18
score: 65.4
IPR043140Ribosomal protein S14/S29GENE3D4.10.830.1030s Ribosomal Protein S14; Chain Ncoord: 1..56
e-value: 1.0E-35
score: 123.4
IPR03974440S ribosomal protein S29/30S ribosomal protein S14 type ZPANTHERPTHR1201040S RIBOSOMAL PROTEIN S29coord: 1..54
NoneNo IPR availablePANTHERPTHR12010:SF1440S RIBOSOMAL PROTEIN S29coord: 1..54
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 13..49

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016976.1PI0016976.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005840 ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008270 zinc ion binding