PI0016964 (gene) Melon (PI 482460) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTTTTTATATCAGACTTATTATGACAGTTAACCATTGAATGGGCTTAAATCTAAACAAAACTATGTCAGCGCTCGCAAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAACTAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGGTTTCTCTCTCTCTCTCTCTCTCTTTCGCGCTATTTCTTTTCAGTTTATGAGATTAAGGTGTATGTTTCTGGAAATCGTTGCAGACTTTGGCGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTGAGTTAGCCATTCAGTCTTTGCTGCTCATTATTTGATTTCTCAAAGCTACTTGAATTTTCATTGTCAATTTAACCACTTTCCCTAATTTTGAAATTGATTGTTTTTGTTATTTGGGATTTTTGGTGAAGATCCTGTTCTTAGTTTGTTGAAAATCCTGTGTTTGATCACCCATTTGCATTTGAGGGCCGTTATTGCTGTTTTTTTTTTTTTTCTGTGGGTAACAACATTTCTCAATGATGATAAATGAAGAGACTATTCCCGACTACCAGCTATCTCAACTTGGTTAACACACAGATAATACCCACATCGCATCCCAATAAAATACAGCAATTAAATTCGATTACGATATATCATGATGACATCATTACATTGCCTGAATGAAAGTATTCCAATTAAGACAAATATCTTGAACTGAATAATATGAAAATAGTTTGGAAAGAGAGCAGCAAGAGGAAGCTTAAAACGGTCAATCCACTGAAGTGACTTGTCGGATGTGTAGCAATTTGTTATCCCGTTGCTTCCTAGGACGTGTAGTATTTTCGATCTTGGGTCGAAGCTTAACACATGTTCACAGTTGCTATAAGAATCCCCAAATTTCAAAGCACTTCTTTTAGGATCAAACTCTAAATAGCTCTTAAATTAGAGCTCTCAGGTATGGTTTCTTCATGTTGCCTTGAGCATTTTTCTCTCTTCTCCTCTTTCCTCATGAAGCTTGGTACTCCAAATGATGAAATGAAGATCTCCTTTGCATGAATCATATGAATGCTGCTTCCTTAACACTCCTTATATTTGTTACAGGTTTTAGGTGTCAAAAGAAGACAAGTATCTATAGGTTCTGGCTCCAAATCAAGAGGCAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAACATGTGAGTGATTCTATGGGCTCTTTGGAAGTTCACACCCTTTAACAGAATATCAGCTATATTGTAATAAGTATATAGGTGGATTAACTACTACCTTGCTGCCAGAACATTCAAAGTTATACAGCTAGATGTAACTCTTATATGTTTTTATTTGTTTCAAACCTCAACAATAGTTTACGTGCTGTATATTTTGTAGAGTTTCAACTTTATGGTAGTGAGCTGAAATATCTTAACCTG TTTGTTTTTATATCAGACTTATTATGACAGTTAACCATTGAATGGGCTTAAATCTAAACAAAACTATGTCAGCGCTCGCAAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAACTAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGACAAGTATCTATAGGTTCTGGCTCCAAATCAAGAGGCAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAACATGTGAGTGATTCTATGGGCTCTTTGGAAGTTCACACCCTTTAACAGAATATCAGCTATATTGTAATAAGTATATAGGTGGATTAACTACTACCTTGCTGCCAGAACATTCAAAGTTATACAGCTAGATGTAACTCTTATATGTTTTTATTTGTTTCAAACCTCAACAATAGTTTACGTGCTGTATATTTTGTAGAGTTTCAACTTTATGGTAGTGAGCTGAAATATCTTAACCTG ATGGGCTTAAATCTAAACAAAACTATGTCAGCGCTCGCAAAAATTCCGTTTGATTTGGGAAAGAAAATGCCTCCGGCGAAGAAGGGGAAAACTAAAGCGCCGAAAGCTACTGAATCAATTCAATCCTCCGTCAAAACCAACAATTACCCATCTTGTCTTCGCTCTGTTTCTCCTTCTTCCGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTACAAATCGACGCACCGGCCAAAGATGGAGAAGCTAATGCTGCACTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGACAAGTATCTATAGGTTCTGGCTCCAAATCAAGAGGCAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCTTTAACATGTGAGTGA MGLNLNKTMSALAKIPFDLGKKMPPAKKGKTKAPKATESIQSSVKTNNYPSCLRSVSPSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQVSIGSGSKSRGKVVIVEEVSLQSVFDALNKALTCE Homology
BLAST of PI0016964 vs. ExPASy Swiss-Prot
Match: Q505I4 (UPF0235 protein C15orf40 homolog OS=Rattus norvegicus OX=10116 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 9.2e-11 Identity = 47/111 (42.34%), Postives = 59/111 (53.15%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy Swiss-Prot
Match: Q3ZBP8 (UPF0235 protein C15orf40 homolog OS=Bos taurus OX=9913 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10 Identity = 37/86 (43.02%), Postives = 53/86 (61.63%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy Swiss-Prot
Match: Q9CRC3 (UPF0235 protein C15orf40 homolog OS=Mus musculus OX=10090 PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.5e-10 Identity = 45/111 (40.54%), Postives = 58/111 (52.25%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy Swiss-Prot
Match: Q8WUR7 (UPF0235 protein C15orf40 OS=Homo sapiens OX=9606 GN=C15orf40 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 3.0e-09 Identity = 45/130 (34.62%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy Swiss-Prot
Match: Q54UW1 (UPF0235 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0280783 PE=3 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08 Identity = 36/125 (28.80%), Postives = 63/125 (50.40%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy TrEMBL
Match: A0A1S3CDI8 (UPF0235 protein LHK_03181 OS=Cucumis melo OX=3656 GN=LOC103499646 PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 8.0e-66 Identity = 138/149 (92.62%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy TrEMBL
Match: A0A0A0LMY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G301550 PE=3 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65 Identity = 137/149 (91.95%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy TrEMBL
Match: A0A6J1I6J5 (UPF0235 protein C15orf40 homolog OS=Cucurbita maxima OX=3661 GN=LOC111470398 PE=3 SV=1) HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54 Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy TrEMBL
Match: A0A6J1CR98 (uncharacterized protein LOC111013451 OS=Momordica charantia OX=3673 GN=LOC111013451 PE=3 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 3.5e-53 Identity = 117/128 (91.41%), Postives = 122/128 (95.31%), Query Frame = 0
BLAST of PI0016964 vs. ExPASy TrEMBL
Match: A0A6J1EMK4 (uncharacterized protein LOC111434889 OS=Cucurbita moschata OX=3662 GN=LOC111434889 PE=3 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.3e-52 Identity = 116/126 (92.06%), Postives = 119/126 (94.44%), Query Frame = 0
BLAST of PI0016964 vs. NCBI nr
Match: XP_008460904.1 (PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo]) HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65 Identity = 138/149 (92.62%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of PI0016964 vs. NCBI nr
Match: XP_004151587.1 (uncharacterized protein LOC101218498 [Cucumis sativus]) HSP 1 Score: 258.5 bits (659), Expect = 3.7e-65 Identity = 137/149 (91.95%), Postives = 141/149 (94.63%), Query Frame = 0
BLAST of PI0016964 vs. NCBI nr
Match: XP_038902101.1 (UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 234.2 bits (596), Expect = 7.4e-58 Identity = 125/128 (97.66%), Postives = 126/128 (98.44%), Query Frame = 0
BLAST of PI0016964 vs. NCBI nr
Match: XP_022971730.1 (UPF0235 protein C15orf40 homolog [Cucurbita maxima]) HSP 1 Score: 221.9 bits (564), Expect = 3.8e-54 Identity = 119/126 (94.44%), Postives = 122/126 (96.83%), Query Frame = 0
BLAST of PI0016964 vs. NCBI nr
Match: XP_023512400.1 (UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 218.0 bits (554), Expect = 5.5e-53 Identity = 117/126 (92.86%), Postives = 120/126 (95.24%), Query Frame = 0
BLAST of PI0016964 vs. TAIR 10
Match: AT1G49170.1 (Protein of unknown function (DUF167) ) HSP 1 Score: 157.5 bits (397), Expect = 8.2e-39 Identity = 87/124 (70.16%), Postives = 106/124 (85.48%), Query Frame = 0
BLAST of PI0016964 vs. TAIR 10
Match: AT5G63440.2 (Protein of unknown function (DUF167) ) HSP 1 Score: 59.3 bits (142), Expect = 3.0e-09 Identity = 31/98 (31.63%), Postives = 59/98 (60.20%), Query Frame = 0
BLAST of PI0016964 vs. TAIR 10
Match: AT5G63440.3 (Protein of unknown function (DUF167) ) HSP 1 Score: 59.3 bits (142), Expect = 3.0e-09 Identity = 31/98 (31.63%), Postives = 59/98 (60.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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