PI0016934 (gene) Melon (PI 482460) v1

Overview
NamePI0016934
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr02: 20802064 .. 20803585 (-)
RNA-Seq ExpressionPI0016934
SyntenyPI0016934
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AATGTTCTTTACTTAATAGTTAATACATAAAAAGAATCAATAGTAATTAGATACCTTTTTAAAATAAAAAAACATAATGATATCTAATCTTGATGTTTAGATAAATTGCTTATTTTACTTAAAATTAGACAGGTTATATTCTAAGAATATCATGTCAGCGATACTATATTCCTAGAATTTATGAATAATGAAATCCCTAAAATGAATGGTCTATTATATTAAAACTTATATTCTAACTTAATTGGTATACTTGATTAAAAGTTCTAAAAGGGCCACCCATTAAATTACCTAAGAAGTAAGTTTAGAATTCTTTTATGATTTTTTTTTTTTTAAAAAAAAGAACATGATTTTGTGAGTATATATTCTAATCCATATATGTCTCTATAAGCTATACACTTTATAGGGGCTACCGTTGGTTTTTTTAGTGTTTAAAAACACAAGTTTCGACCCTTCATTTACTCATTGAAGATTGAATTTAAATATCGAAATCAATCCACATGAAGAAAGGGCTATTAATTTTGTTCCTCTTCTCCATTCTTTGCCTCTATCTTCTTCCATTTTGCCTATGTGAAACCAATTTCACCACCAAAGCTGATGATCATAATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGGTAACAAATCTAACAACCTTTTGGTGGTTTCGAGTGTGTTTGGTTTAACATGGAGTTTCGATTATTATTACTATTTCAAATCCCGTTTTATAACAATATTTACTATTTGTTAAAGTTCATATTATTTTCTACTCATTCTCTCTTTGGTAGTACCTTGTTTATTATTTTCTATTTTCTACCTAGTATGCATTCTGATTAAAATAGTTGCATTCCAAATACATACTATAATAATAATTCAATGTCCCAAACATCTTCTTAAAAGTTTATTAAAAAAACTGTTTAAATAGAAAAATTTTTTGAAAAACATTTTTTCTCTGATCAATTAAAGTGTAGTTGGATCTACAGGTTTACAGGGCGGTGAAGAATTACATGGTGGAGCTGCAGTGGCTACAGTTATGAGAGCAAAAGCAGTTTACGGCGGTGCAAGTGACATTCATCACGGGCACGCGAAGAATGACGCTAACTCTTTACAGATCAAATCAATTTCTTCGTTGGTGTGGAAAGTTTCATTCGGATTCCTTGGTTTCTGTCTTGTTTTTAAAGGTTTTTAAGCAACAAGCTCTGTTGTAAGGTTTTAGCAGAGCAGTCGTAAAGTGTCATGTTCTGTAATGGCTTATTTTATGGCCAAATGTTAATGTTGGAAAACTTGGCTTTGAAGCTTCATAACGCTTCATTCTCTACACTATTTTTTACTTTGTAGACAGAATCTTGTTCTTCCAAGTCTGTTTAACAAGGTTTAAAGTTAGTAATTTGTAATTTACTTTATCTTTTGAGTCCAGAATAAATTTGGTTTTGGCATCTCTTCATACGTGTCTGATTTACTCAAGAATGTAAGGATGTTTAGGACACTGAGTTAGTTATTAAAGCAAGTGAGTTATAATAGTGC

mRNA sequence

AATGTTCTTTACTTAATAGTTAATACATAAAAAGAATCAATAGTAATTAGATACCTTTTTAAAATAAAAAAACATAATGATATCTAATCTTGATGTTTAGATAAATTGCTTATTTTACTTAAAATTAGACAGGTTATATTCTAAGAATATCATGTCAGCGATACTATATTCCTAGAATTTATGAATAATGAAATCCCTAAAATGAATGGTCTATTATATTAAAACTTATATTCTAACTTAATTGGTATACTTGATTAAAAGTTCTAAAAGGGCCACCCATTAAATTACCTAAGAAGTAAGTTTAGAATTCTTTTATGATTTTTTTTTTTTTAAAAAAAAGAACATGATTTTGTGAGTATATATTCTAATCCATATATGTCTCTATAAGCTATACACTTTATAGGGGCTACCGTTGGTTTTTTTAGTGTTTAAAAACACAAGTTTCGACCCTTCATTTACTCATTGAAGATTGAATTTAAATATCGAAATCAATCCACATGAAGAAAGGGCTATTAATTTTGTTCCTCTTCTCCATTCTTTGCCTCTATCTTCTTCCATTTTGCCTATGTGAAACCAATTTCACCACCAAAGCTGATGATCATAATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGTTGGATCTACAGGTTTACAGGGCGGTGAAGAATTACATGGTGGAGCTGCAGTGGCTACAGTTATGAGAGCAAAAGCAGTTTACGGCGGTGCAAGTGACATTCATCACGGGCACGCGAAGAATGACGCTAACTCTTTACAGATCAAATCAATTTCTTCGTTGGTGTGGAAAGTTTCATTCGGATTCCTTGGTTTCTGTCTTGTTTTTAAAGGTTTTTAAGCAACAAGCTCTGTTGTAAGGTTTTAGCAGAGCAGTCGTAAAGTGTCATGTTCTGTAATGGCTTATTTTATGGCCAAATGTTAATGTTGGAAAACTTGGCTTTGAAGCTTCATAACGCTTCATTCTCTACACTATTTTTTACTTTGTAGACAGAATCTTGTTCTTCCAAGTCTGTTTAACAAGGTTTAAAGTTAGTAATTTGTAATTTACTTTATCTTTTGAGTCCAGAATAAATTTGGTTTTGGCATCTCTTCATACGTGTCTGATTTACTCAAGAATGTAAGGATGTTTAGGACACTGAGTTAGTTATTAAAGCAAGTGAGTTATAATAGTGC

Coding sequence (CDS)

ATGAAGAAAGGGCTATTAATTTTGTTCCTCTTCTCCATTCTTTGCCTCTATCTTCTTCCATTTTGCCTATGTGAAACCAATTTCACCACCAAAGCTGATGATCATAATAAGCAGCTGAAGCAGGGGAGGCCCAGAAAAGTTGGATCTACAGGTTTACAGGGCGGTGAAGAATTACATGGTGGAGCTGCAGTGGCTACAGTTATGAGAGCAAAAGCAGTTTACGGCGGTGCAAGTGACATTCATCACGGGCACGCGAAGAATGACGCTAACTCTTTACAGATCAAATCAATTTCTTCGTTGGTGTGGAAAGTTTCATTCGGATTCCTTGGTTTCTGTCTTGTTTTTAAAGGTTTTTAA

Protein sequence

MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHGGAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKGF
Homology
[Close]
BLAST of PI0016934 vs. ExPASy TrEMBL
Match: A0A5A7SWW6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00500 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.7e-50
Identity = 105/116 (90.52%), Postives = 110/116 (94.83%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDH+KQLKQGRPRK GST LQG EELHG
Sbjct: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRK-GSTDLQGSEELHG 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFK 117
           GAAV TVMRAKAVYGGA+DIHHG +KNDANSL+IKSISSLVWKVSFGFLGFCL+ K
Sbjct: 61  GAAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGFLGFCLIVK 115

[Close]
BLAST of PI0016934 vs. ExPASy TrEMBL
Match: A0A0A0LW17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257310 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.0e-47
Identity = 101/118 (85.59%), Postives = 108/118 (91.53%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           MKKGLL+LFLFSI+ LYLLPFCLCETNFTTKADDHNKQLKQGRPRK     +Q  EELHG
Sbjct: 1   MKKGLLLLFLFSIIFLYLLPFCLCETNFTTKADDHNKQLKQGRPRK----DVQSSEELHG 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKGF 119
           GA+VATVMRAKAVYGGA+DIHHGH+KNDANSL IKSISSLVWKVSFGFLGFC+V KGF
Sbjct: 61  GASVATVMRAKAVYGGANDIHHGHSKNDANSLWIKSISSLVWKVSFGFLGFCVVVKGF 114

[Close]
BLAST of PI0016934 vs. ExPASy TrEMBL
Match: A0A6J1JM10 (uncharacterized protein LOC111485797 OS=Cucurbita maxima OX=3661 GN=LOC111485797 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 4.1e-25
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           M+KG  +L L S+LCL LLPFCL E  FT KA D  K LKQGRPRK     LQ  E+++ 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRK----DLQASEQINV 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKG 118
           GAA   VMRA+ VYGG +DIH GH+KNDAN L+IKS SSL+W+VS GF   C++  G
Sbjct: 61  GAA-TRVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWEVSCGFFSLCVLLTG 112

[Close]
BLAST of PI0016934 vs. ExPASy TrEMBL
Match: A0A6J1E284 (uncharacterized protein LOC111429900 OS=Cucurbita moschata OX=3662 GN=LOC111429900 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 1.2e-24
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           M+KG  +L L S+LCL LLPFCL E +FT KA D  K LKQGRPRK     LQ  ++++ 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRK----DLQDSKQINV 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKG 118
           GAA   VMRA+ VYGG +DIH GH+KNDAN L+IKS SSL+W VS GF   C++  G
Sbjct: 61  GAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSLCVLLTG 112

[Close]
BLAST of PI0016934 vs. ExPASy TrEMBL
Match: A0A6J1C4Y5 (uncharacterized protein LOC111007432 OS=Momordica charantia OX=3673 GN=LOC111007432 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 4.3e-14
Identity = 55/105 (52.38%), Postives = 66/105 (62.86%), Query Frame = 0 

Query: 2   KKGLLILFLFSILCLYLLPFC-LCETNFTTKADD-HNKQLKQGRPRKVGSTGLQGGEELH 61
           K GL+IL L SI     LP C   ETNFT K +D + +QLKQGRP K      +  EE  
Sbjct: 3   KLGLIILLLISI--DLSLPICHSAETNFTIKPEDLYKQQLKQGRPTKDLEGERKESEETG 62

Query: 62  GGAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKV 105
            GA    +MRA+ VYGGASD+  GH+KNDA SL+IKSI S  W+V
Sbjct: 63  AGATAGKMMRARGVYGGASDMRRGHSKNDATSLRIKSIPSSFWEV 105

[Close]
BLAST of PI0016934 vs. NCBI nr
Match: KAA0035098.1 (uncharacterized protein E6C27_scaffold57G001730 [Cucumis melo var. makuwa] >TYJ95980.1 uncharacterized protein E5676_scaffold271G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 207.2 bits (526), Expect = 7.6e-50
Identity = 105/116 (90.52%), Postives = 110/116 (94.83%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDH+KQLKQGRPRK GST LQG EELHG
Sbjct: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHDKQLKQGRPRK-GSTDLQGSEELHG 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFK 117
           GAAV TVMRAKAVYGGA+DIHHG +KNDANSL+IKSISSLVWKVSFGFLGFCL+ K
Sbjct: 61  GAAVVTVMRAKAVYGGANDIHHGRSKNDANSLRIKSISSLVWKVSFGFLGFCLIVK 115

[Close]
BLAST of PI0016934 vs. NCBI nr
Match: KGN65174.1 (hypothetical protein Csa_019558 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-47
Identity = 101/118 (85.59%), Postives = 108/118 (91.53%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           MKKGLL+LFLFSI+ LYLLPFCLCETNFTTKADDHNKQLKQGRPRK     +Q  EELHG
Sbjct: 1   MKKGLLLLFLFSIIFLYLLPFCLCETNFTTKADDHNKQLKQGRPRK----DVQSSEELHG 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKGF 119
           GA+VATVMRAKAVYGGA+DIHHGH+KNDANSL IKSISSLVWKVSFGFLGFC+V KGF
Sbjct: 61  GASVATVMRAKAVYGGANDIHHGHSKNDANSLWIKSISSLVWKVSFGFLGFCVVVKGF 114

[Close]
BLAST of PI0016934 vs. NCBI nr
Match: XP_022988599.1 (uncharacterized protein LOC111485797 [Cucurbita maxima])

HSP 1 Score: 124.0 bits (310), Expect = 8.5e-25
Identity = 68/117 (58.12%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           M+KG  +L L S+LCL LLPFCL E  FT KA D  K LKQGRPRK     LQ  E+++ 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRK----DLQASEQINV 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKG 118
           GAA   VMRA+ VYGG +DIH GH+KNDAN L+IKS SSL+W+VS GF   C++  G
Sbjct: 61  GAA-TRVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWEVSCGFFSLCVLLTG 112

[Close]
BLAST of PI0016934 vs. NCBI nr
Match: XP_023516536.1 (uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-24
Identity = 68/117 (58.12%), Postives = 81/117 (69.23%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           M+KG  +L L S+LCL LLPFCL E  FT KA D  K LKQGRPRK     LQ  +++  
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAYFTNKAYDPYKHLKQGRPRK----DLQDSKQIKV 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKG 118
           GAA  TVMRA+ VYGG +DIH GH+KNDAN L+IKS SSL+W VS GF   C++  G
Sbjct: 61  GAA-TTVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSLCVLLTG 112

[Close]
BLAST of PI0016934 vs. NCBI nr
Match: XP_022921746.1 (uncharacterized protein LOC111429900 [Cucurbita moschata])

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-24
Identity = 67/117 (57.26%), Postives = 82/117 (70.09%), Query Frame = 0 

Query: 1   MKKGLLILFLFSILCLYLLPFCLCETNFTTKADDHNKQLKQGRPRKVGSTGLQGGEELHG 60
           M+KG  +L L S+LCL LLPFCL E +FT KA D  K LKQGRPRK     LQ  ++++ 
Sbjct: 1   MRKGPFLLLLISLLCLCLLPFCLSEAHFTNKAYDPYKHLKQGRPRK----DLQDSKQINV 60

Query: 61  GAAVATVMRAKAVYGGASDIHHGHAKNDANSLQIKSISSLVWKVSFGFLGFCLVFKG 118
           GAA   VMRA+ VYGG +DIH GH+KNDAN L+IKS SSL+W VS GF   C++  G
Sbjct: 61  GAA-TKVMRARGVYGGGNDIHRGHSKNDANPLRIKSTSSLLWDVSCGFFSLCVLLTG 112

The following BLAST results are available for this feature:
BLAST of PI0016934 vs.
Match NameE-valueIdentityDescription
BLAST of PI0016934 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SWW63.7e-5090.52Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LW171.0e-4785.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257310 PE=4 SV=1[more]
A0A6J1JM104.1e-2558.12uncharacterized protein LOC111485797 OS=Cucurbita maxima OX=3661 GN=LOC111485797... [more]
A0A6J1E2841.2e-2457.26uncharacterized protein LOC111429900 OS=Cucurbita moschata OX=3662 GN=LOC1114299... [more]
A0A6J1C4Y54.3e-1452.38uncharacterized protein LOC111007432 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
BLAST of PI0016934 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0035098.17.6e-5090.52uncharacterized protein E6C27_scaffold57G001730 [Cucumis melo var. makuwa] >TYJ9... [more]
KGN65174.12.1e-4785.59hypothetical protein Csa_019558 [Cucumis sativus][more]
XP_022988599.18.5e-2558.12uncharacterized protein LOC111485797 [Cucurbita maxima][more]
XP_023516536.11.9e-2458.12uncharacterized protein LOC111780387 [Cucurbita pepo subsp. pepo][more]
XP_022921746.12.5e-2457.26uncharacterized protein LOC111429900 [Cucurbita moschata][more]
BLAST of PI0016934 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016934.2PI0016934.2mRNA