PI0016884 (gene) Melon (PI 482460) v1

Overview


Name	PI0016884
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Reverse transcriptase
Location	chr11: 8893219 .. 8897390 (+)
RNA-Seq Expression	PI0016884
Synteny	PI0016884

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAAAGGTTAATTGTGATATGAGCTAGTAGCGAGACCTAATGAACATACAGATCATGAACTCCAATGGTCCAAGATTAACCATCTAAACTCTTTTAACCTAGCTAACCAACATTCGTTAACTAACGAGACTGTCCACTATAGCTTGTAGTTGTACTCTCCTCACTTTAGATATATTTGTGTCCATTTGATATAACCACCATCAGTAAGCCAATCCTTCACAGGTTGTTCATAACTACGGTTGAGTCAAAATACTGTTTTATCCCTAGATTACATATTGTTCCTTAAGTCCTAATTGATCCTCTAATGAATAATTGGTTTATGATCTAACCATAAAACCGAATCCCACTCAAGCCAACGAGAGGGTGGGACCTTTTGTTCAATACCTAGAGTCAGCAATAAAAGGAACAACCTTTCTACTATCCTTAGAAGCGGGTAGAAGTGAATTTCGTCTTGCACCCTATCTCCGCAGCTATCTACCCTGTCTTACCTCTAAAATGTCATCTATTGAATCAACGCTGTTGATAGCGTTGGAAATACACTATCTTATTCAACTTAATACGAACTTGTTCCTTGATTTTTACGTTTTTGACTAGCTATTTTATAGCTTTGAGTAATTCGAAGGTAGAATTTGGTGTTGATATTGATTTGGAGCTTAATTGTGCAACTCGAAGTCAAGTGGCATCAACCCGGGGCTTATGTATGAAGAAAAAGAAGCTAATTAGCTTCTGTCCTACAGTACAGCAGCGCTGTAGCACAGAATGGTTGAATTCTGCGAAAAGGCCATGGCACCGCAATACTGCCTGGAACGTCACGACGCTCCGAACTCCATACACGTGTAAACGTTTATTAGCACTGTGAAAATTTTATAAAAGAGTTCCTTTGCTACTAGGTTTTAGGCATCTCGGATCCAACCTTTCTACCACTTTTTTCTCTCAATTTTCAGAGCTTATCTTGATGGTTAATGTTTTCGAACACTCCCTCATCATCCGACATGTGGATGTGAGGCTAAGGTACTCTTATCTAGCTTGAGTTGCTTATGATTTTCCTTAATTCTATGTATTCGTGATGTTTGAACTGAATTATCTTGCTGTGACTTTTCAATTCTGATTATAATGATTAAAATTCATACTATGGACGCTTGAAATTGTATGATGTTTGCTTAATTGTGATGTAACTCCTCTTGATTGTGTGATAATTGAATGAAGAAATAGGGTAGATTAGCTTGCAAGCAAATTTGTGTGTGCATTGTTCTAATCAACTTAAAATTGAAGCATCGAATAAATAGCTAGACGCATGGAAGTTAATTATTCACCTTAACGAGCCATTGATCTTAATGCAATTGATAGTAAGTTGAACTTTGTATACATCTCATCGATTAAATTGGTAATAATTAGTTGCTTAGGACGATTCAACTGGCGTTTCTAATTGAATTGGTTAGGTGTAATCAATCTAAAAATTCGGTAATGATAAAAGCATGATTGAATGCATTGAATAGGGAATTCCATTAGACCCAATCTAGATTCTTTTGATATAGAATGTCTACAATTTATTCTCTCCTTGCAATTTATTTTCTTGCAATTGAAAACAACTTCGAACCCCCTTTTCAGTTACTTTGGTAGGAAAATTAGTTGGTTTGAGAAATTTAGGTGCTCCTTGAGTTCGATTTGTATTTTCCACTTCGACTAGTTCTTGGTGTGTAAATCTGGTAATTTATTGGACACGGATTTGGGCGATGAAACCCGTTTGTCAAATTGGTGTCGTTGATGGGGAGCGTCTAGATTTCTCTTGCGAAAGAGTTTTCTACCTTTTTTTTATTGTTCTTTATTTTTCTCTTTCTTTGTATGACCCGATCCTTCTAGAATTTGAATTTTTAGTTATATTTTGTAGAGTTAAGTCGAGAGGAGAGGCGAAAAAGAAAAAAGGCTAGGGAGCAAAGAGCTTCTGAGGAGGACATTTGTGATGAAGGGCACGTTTGAGGAGGAACTTCCAAAGCAGAAAGTAGAGAGCATGACGGATCTTGTGTCAGAGAGTATTTTGAGGGATTTTGCTGCCCTTGACTTTACCCAGTAGTCCCCCTGTATTATCTATCCCTAGACGATAGGTAATTTTGAGCTTAAAACGGGGTTAATTCACTTACTACTTATTTTTCATGGCCTTGCAGATGAAAACCCACATAAATTGATCAAGGAGTTCCATGTGGTGTGTTGTGGCATGAGGCCACATAGTGTAACTTAGGAGCAGCTGATTCACTTACTACTTGTTTTTCATGGCCTTGTAGATGAAAACCCACATAAATTGATCAAGAAGTTCCACGTGGTGTGTTGTGGCATGAGGCCACATAGTGTAACTTAGGAGCAGTTGATTCACTTACTACTTGTTTTTCATGGCATTCTAGATGAAAACCCACATAAATTGATCAAGGAGTTCCACGTGGTGTGTTGTGGCATGAGGCCATATAGTCTAACTTAGGAGCAGCTGAACCTTAGAGCCTTCCCTTCGCCTTGAAGGATGCCGCAAAGGATTGACTTTACATTCTTCTTGCAGGATCTGTGACCACCTAGGCTCCGATGAAGAAGCTTTTCCTAGAAAGTTTTTTCCAGAGGCATCGCCAAAATTAGAAAAGAGATTTATGGTATCACACAGGTGAACGATGAGACACTGCACGAGTATTGGGAGCGGTTCAAGCGATTGTGTTACAACTTGCCACATCATCAGATATCTGATGCACTCCTGATTCAACACTTGTATGAGTGGCTAGTCTTCGATGATAAAAGTACGATTGATGCAGTTGCGAGAGGAGCCTTGATTAACAACACTCCTACAGAGGTCAGAGCATTAATATCCACCATGGATGTTAATGTGCAGTAGTTCGAAACCAGAGATCGAATCCCCCTGTCCACCACATCTTCACAAGAGGTAAGCGAGCTTAGATCTGGACTTGTTGAATTGACTAGTCTTATGAAACAAATATTCATTGCTCGTGGACTCAACTTTTGGAGTTTGTAACTGAGGTGAACTACGCTAGAAACAAGTAGGGTGGTAGGCAACACAATCGAAACCCTTGGGGAGGCCAAAGGCACAATCAAGGTGGACAAGGATATTAGCTCTAGCATGCCCTTCAAGGACGAAGTGAATAGCCTTTCTGAAATTGTCTTGCAGTTGAACCAAAATCCAGATGCCACAATCTCCTATATGCAAAGTTTGATTACACATGTGTCCCAGTTGGACAGCACAGTAAGTAGACTTTACACCCGTATGGGAAGCTTCCTTCACAACCCGCGTCGAATGTGTGTAACGTTAGTGTCATCTCCATCGTATGCTCCGTTGAGAGTTTTGCTTCACCAGTGTTTGAGCTAGTTGACGAGATTGACTAGGAGACTTCTGTCATTTCACCCACGAGGCGAAGGATATGGTTTGACCCTCCTTTAGGTTTAGATGATTATGTTCTTGTTGGCCATCTTTCCTAACAGGTTAGTTGTTGCTAACGAATGGGCAAAGAAGTACGAGGTGAGTTTTGCCCTATTGCCAGGTAAGAAAAGCCTTTCTGCTAAGGGTAAGAAAATTTGGGTTGAAGTGCGTCCTAGAGACGTAGAAGGAAAGGATGAGATCAAATAGGAGGCTACTATTACAGGTAATCTTCCTGTAAAACATGATCATCCAGGTATATTTTTTATTCCTTCCTCTACAGGGTTTAGAAAATTTTAGAGTGTTATGCTAGATTTACGATCAACTATTAATATCATGCCTACCCCTGTTTACTCTGAGTTTTAGTCGCATATCATGCACCCTGTTGATATTTTAATGCAGTTAACTGATCTCTCCTTAGTTAGGCATCTAGGTTTGGTTAAGGATGTCTTGGTTAGAGTTGATGACCTATTGTTTCCTATGGATTTTTATGTGGTGAATGTGAATACTTCCTCCCCTCCCTTTGAGTTATCTGTTATGCTAGGGAGACCCTTCTTAAAGGCAACAAAAGTTGTAATAGATGTGGATAAACAGTCTCTTAGGACCAAACAAGGAAGGAAATCTCACACTTTTATAATGATCAATGACAGTTCTTCTACTAATCCTATATGTTTTAGTTCTTCTATTTTACAGGATAATAGCCCACCTCTTAAGTTAGGGGCGGAGGATGTTTGCTCTAGTCTTCATGATGATTATGGTTGA

mRNA sequence

ATGTTCAAAGCTTTGAGTAATTCGAAGGTAGAATTTGGTGTTGATATTGATTTGGAGCTTAATTGTGCAACTCGAAGTCAAGTGGCATCAACCCGGGGCTTATGTATGAAGAAAAAGAAGCTAATTAGCTTCTGTCCTACAGTACAGCAGCGCTGTAGCACAGAATGGTTGAATTCTGCGAAAAGGCCATGGCACCGCAATACTGCCTGGAACGTCACGACGCTCCGAACTCCATACACGTGTAAACAGCTTATCTTGATGGTTAATGTTTTCGAACACTCCCTCATCATCCGACATGTGGATGTGAGGCTAAGGATCTGTGACCACCTAGGCTCCGATGAAGAAGCTTTTCCTAGAAAGTTTTTTCCAGAGGCATCGCCAAAATTAGAAAAGAGATTTATGATATCTGATGCACTCCTGATTCAACACTTGTATGAGTGGCTAGTCTTCGATGATAAAAGTACGATTGATGCAGTTGCGAGAGGAGCCTTGATTAACAACACTCCTACAGAGTTGAACCAAAATCCAGATGCCACAATCTCCTATATGCAAAGTTTGATTACACATGTGTCCCAGTTGGACAGCACAGTAAGTAGACTTTACACCCGTATGGGAAGCTTCCTTCACAACCCGCGTCGAATGTGTGTAACGTTAGTTGTTGCTAACGAATGGGCAAAGAAGTACGAGGTGAGTTTTGCCCTATTGCCAGGTAAGAAAAGCCTTTCTGCTAAGGGTAAGAAAATTTGGGTTGAATTAACTGATCTCTCCTTAGTTAGGCATCTAGGTTTGGTTAAGGATGTCTTGGTTAGAGTTGATGACCTATTGTTTCCTATGGATTTTTATGTGGTGAATGTGAATACTTCCTCCCCTCCCTTTGAGTTATCTGTTATGCTAGGGAGACCCTTCTTAAAGGCAACAAAAGTTGTAATAGATGTGGATAAACAGTCTCTTAGGACCAAACAAGGAAGGAAATCTCACACTTTTATAATGATCAATGACAGTTCTTCTACTAATCCTATATGTTTTAGTTCTTCTATTTTACAGGATAATAGCCCACCTCTTAAGTTAGGGGCGGAGGATGTTTGCTCTAGTCTTCATGATGATTATGGTTGA

Coding sequence (CDS)

ATGTTCAAAGCTTTGAGTAATTCGAAGGTAGAATTTGGTGTTGATATTGATTTGGAGCTTAATTGTGCAACTCGAAGTCAAGTGGCATCAACCCGGGGCTTATGTATGAAGAAAAAGAAGCTAATTAGCTTCTGTCCTACAGTACAGCAGCGCTGTAGCACAGAATGGTTGAATTCTGCGAAAAGGCCATGGCACCGCAATACTGCCTGGAACGTCACGACGCTCCGAACTCCATACACGTGTAAACAGCTTATCTTGATGGTTAATGTTTTCGAACACTCCCTCATCATCCGACATGTGGATGTGAGGCTAAGGATCTGTGACCACCTAGGCTCCGATGAAGAAGCTTTTCCTAGAAAGTTTTTTCCAGAGGCATCGCCAAAATTAGAAAAGAGATTTATGATATCTGATGCACTCCTGATTCAACACTTGTATGAGTGGCTAGTCTTCGATGATAAAAGTACGATTGATGCAGTTGCGAGAGGAGCCTTGATTAACAACACTCCTACAGAGTTGAACCAAAATCCAGATGCCACAATCTCCTATATGCAAAGTTTGATTACACATGTGTCCCAGTTGGACAGCACAGTAAGTAGACTTTACACCCGTATGGGAAGCTTCCTTCACAACCCGCGTCGAATGTGTGTAACGTTAGTTGTTGCTAACGAATGGGCAAAGAAGTACGAGGTGAGTTTTGCCCTATTGCCAGGTAAGAAAAGCCTTTCTGCTAAGGGTAAGAAAATTTGGGTTGAATTAACTGATCTCTCCTTAGTTAGGCATCTAGGTTTGGTTAAGGATGTCTTGGTTAGAGTTGATGACCTATTGTTTCCTATGGATTTTTATGTGGTGAATGTGAATACTTCCTCCCCTCCCTTTGAGTTATCTGTTATGCTAGGGAGACCCTTCTTAAAGGCAACAAAAGTTGTAATAGATGTGGATAAACAGTCTCTTAGGACCAAACAAGGAAGGAAATCTCACACTTTTATAATGATCAATGACAGTTCTTCTACTAATCCTATATGTTTTAGTTCTTCTATTTTACAGGATAATAGCCCACCTCTTAAGTTAGGGGCGGAGGATGTTTGCTCTAGTCTTCATGATGATTATGGTTGA

Protein sequence

MFKALSNSKVEFGVDIDLELNCATRSQVASTRGLCMKKKKLISFCPTVQQRCSTEWLNSAKRPWHRNTAWNVTTLRTPYTCKQLILMVNVFEHSLIIRHVDVRLRICDHLGSDEEAFPRKFFPEASPKLEKRFMISDALLIQHLYEWLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQLDSTVSRLYTRMGSFLHNPRRMCVTLVVANEWAKKYEVSFALLPGKKSLSAKGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSHTFIMINDSSSTNPICFSSSILQDNSPPLKLGAEDVCSSLHDDYG

Homology

[Close]

BLAST of PI0016884 vs. ExPASy TrEMBL
Match: A0A6P6TRI6 (uncharacterized protein LOC113703816 OS=Coffea arabica OX=13443 GN=LOC113703816 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.4e-09
Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 244 KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFL 303
           K  ++ ++LTD S V   G+V+DVLV+V++ +FP DFY+V++N  +      ++LGR F+
Sbjct: 139 KETRVVIQLTDRSNVYSEGVVEDVLVKVNEFIFPTDFYIVDMNDDTSVNSAVLLLGRSFM 198

Query: 304 KATKVVIDVDKQSLRTKQGRKSHTFIM------INDSSSTNPICFSSSILQDN 351
              ++ IDV + +L  K   K+ TF +      ++D+ S N  C ++SI+QD+
Sbjct: 199 STARIKIDVHEGTLSVKFDGKTITFNIFDVMKYLDDTESINYFCVTNSIVQDH 251

[Close]

BLAST of PI0016884 vs. ExPASy TrEMBL
Match: A0A6P6T0V8 (uncharacterized protein LOC113696456 OS=Coffea arabica OX=13443 GN=LOC113696456 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.9e-08
Identity = 39/113 (34.51%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 244 KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFL 303
           K  +I ++L D S V   GLV++VLV+V++ +FP+DFY+V++N         ++LGRPF+
Sbjct: 202 KETRIIIQLADRSNVYPEGLVENVLVKVNEFIFPVDFYIVDMNDEYSTNSAVILLGRPFI 261

Query: 304 KATKVVIDVDKQSLRTKQGRKSHTFIMIN------DSSSTNPICFSSSILQDN 351
             T+  IDV + +L  +   ++ TF + +      D+ S N +  +++ILQ+N
Sbjct: 262 STTRTKIDVHEGTLSVEFDGENVTFNIFDAMKHPVDTESVNFVSMTNTILQEN 314

[Close]

BLAST of PI0016884 vs. ExPASy TrEMBL
Match: A0A6S7NPW3 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS28532 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.1e-07
Identity = 31/63 (49.21%), Postives = 45/63 (71.43%), Query Frame = 0


Query: 250 VELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVV 309
           ++L D SLV   G+++DVLV+VD+ +FP DFYV+++     P   S++LGRPFLK +K  
Sbjct: 245 IQLADRSLVHPKGVLEDVLVQVDEFIFPADFYVLDMGDDDSPSSSSILLGRPFLKTSKTK 304

Query: 310 IDV 313
           IDV
Sbjct: 305 IDV 307

[Close]

BLAST of PI0016884 vs. ExPASy TrEMBL
Match: A0A392NH73 (Uncharacterized protein OS=Trifolium medium OX=97028 GN=A2U01_0018861 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-07
Identity = 30/73 (41.10%), Postives = 53/73 (72.60%), Query Frame = 0


Query: 250 VELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVV 309
           + L D S++R  G+VKDV+V+V+ LLFP+DF +V++   +   ++ ++LGRPFL  ++ V
Sbjct: 77  IVLADPSIIRPSGMVKDVIVKVNKLLFPVDFTIVDIEVDT---DVPIILGRPFLATSRAV 136

Query: 310 IDVDKQSLRTKQG 323
           ID++K+ L+ + G
Sbjct: 137 IDMEKEELKLRMG 146

[Close]

BLAST of PI0016884 vs. ExPASy TrEMBL
Match: A0A6P6WYZ4 (uncharacterized protein LOC113735952 OS=Coffea arabica OX=13443 GN=LOC113735952 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-07
Identity = 37/113 (32.74%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 244 KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFL 303
           K  ++ ++L D S V   GLV+DVLV+V++ +FP+DFY+V++N +     + ++LGRPF+
Sbjct: 169 KETRVIIQLADRSNVYPEGLVEDVLVKVNEFIFPVDFYIVDMNDAYSTDSVVILLGRPFM 228

Query: 304 KATKVVIDVDKQSLRTKQGRKSHTFIMIN------DSSSTNPICFSSSILQDN 351
              +  IDV + +L  +   +  TF + +      D+ S N +  +++I+Q+N
Sbjct: 229 STARTKIDVHEGTLSVEFDGEKVTFNIFDAMKHPVDTESVNFVGMTNTIVQEN 281

[Close]

BLAST of PI0016884 vs. NCBI nr
Match: XP_038890303.1 (uncharacterized protein LOC120079919 [Benincasa hispida])

HSP 1 Score: 112.1 bits (279), Expect = 1.0e-20
Identity = 76/224 (33.93%), Postives = 119/224 (53.12%), Query Frame = 0


Query: 147 WLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQLDSTVSRLYTRMGS 206
           W ++D     +  ARG ++ N    LN+  +   + ++ +++     +  +S +      
Sbjct: 25  WDIYDRWVRANEKARGYILANISNVLNKKHEVMPTALEIMLSLQEISERLLSSVRHEAIK 84

Query: 207 FLHNPRRMCVTLVVANEWAKKYEVSFALLPGKKSLSAKGKKIWVELTDLSLVRHLGLVKD 266
           + ++ R    + V   E+     V F +  G +++  K      +L D SLVR LGLV+D
Sbjct: 85  YFYSTRMKDGSNV--REYVLDMMVHFNISEGHRTMMDKIS----QLADHSLVRTLGLVQD 144

Query: 267 VLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVDKQSLRTKQGRKSH 326
           +L+RV+ L F   FYV++VN  SPP  LSV+LGRPFL  TKVVI+VDK SL+ ++G K  
Sbjct: 145 MLIRVNGLSFLAHFYVIDVNAHSPPSNLSVLLGRPFLNTTKVVINVDKGSLQIEKGGKFE 204

Query: 327 TFIMINDSSSTNPICFSSSILQDNSPPLKLGAEDVCSSLHDDYG 371
              + +   +T PIC S+   QD+  P  LG  D  S + D YG
Sbjct: 205 KNFINDILITTKPICSSTISFQDDDKPPNLGVGDGDSMIGDGYG 242

[Close]

BLAST of PI0016884 vs. NCBI nr
Match: XP_038887084.1 (uncharacterized protein LOC120077260 [Benincasa hispida])

HSP 1 Score: 75.5 bits (184), Expect = 1.1e-09
Identity = 35/81 (43.21%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 248 IWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATK 307
           + ++L D S ++ LG+V+DVL++V DL+FP+DFY++ ++  S P   +++LGRPF+K  K
Sbjct: 181 VCIQLADRSYIQPLGIVEDVLLQVKDLIFPVDFYILKMDEISTPSSSTILLGRPFMKTAK 240

Query: 308 VVIDVDKQSLRTKQGRKSHTF 329
             IDVDK  L  K   K  +F
Sbjct: 241 TKIDVDKGCLSIKSDGKVISF 261

[Close]

BLAST of PI0016884 vs. NCBI nr
Match: XP_012435389.1 (PREDICTED: uncharacterized protein LOC105762011 [Gossypium raimondii])

HSP 1 Score: 73.9 bits (180), Expect = 3.2e-09
Identity = 57/184 (30.98%), Postives = 97/184 (52.72%), Query Frame = 0


Query: 135 ISDALLIQHLYEWLVFDDKSTIDAVARGALINNTPTELNQNPDATISYMQSLITHVSQ-L 194
           IS+ LL+Q+ YE L   D+  IDA +  AL++ TP +            ++LI +++Q L
Sbjct: 63  ISEQLLVQYFYEGLTPQDRRMIDAASGSALVDKTPEQ-----------ARNLIANMAQIL 122

Query: 195 DSTVSRLYTRMGSFLHNPRRMCVTLVVANEWAKKYEVSFALLPGKKSLSAKGKKIWVELT 254
            ++VS  +T           MC TL    E    +    ++  G +  S K   + ++L 
Sbjct: 123 SNSVSGGHT---------IDMCPTL-QEGEANAVFPNQRSIYDGVQLGSLKETGLIIQLA 182

Query: 255 DLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFLKATKVVIDVD 314
           D S     G+++DVLV+V++L+F  DFY +++  +    ++ ++LGRPFLK  +  IDV 
Sbjct: 183 DRSNAYPDGVLEDVLVQVNELVFLADFYGLDMGPNDNSIDVPLLLGRPFLKTARTKIDVH 225

Query: 315 KQSL 318
           K +L
Sbjct: 243 KGNL 225

[Close]

BLAST of PI0016884 vs. NCBI nr
Match: XP_027081098.1 (uncharacterized protein LOC113703816 [Coffea arabica])

HSP 1 Score: 72.8 bits (177), Expect = 7.1e-09
Identity = 40/113 (35.40%), Postives = 70/113 (61.95%), Query Frame = 0


Query: 244 KGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRPFL 303
           K  ++ ++LTD S V   G+V+DVLV+V++ +FP DFY+V++N  +      ++LGR F+
Sbjct: 139 KETRVVIQLTDRSNVYSEGVVEDVLVKVNEFIFPTDFYIVDMNDDTSVNSAVLLLGRSFM 198

Query: 304 KATKVVIDVDKQSLRTKQGRKSHTFIM------INDSSSTNPICFSSSILQDN 351
              ++ IDV + +L  K   K+ TF +      ++D+ S N  C ++SI+QD+
Sbjct: 199 STARIKIDVHEGTLSVKFDGKTITFNIFDVMKYLDDTESINYFCVTNSIVQDH 251

[Close]

BLAST of PI0016884 vs. NCBI nr
Match: XP_019172756.1 (PREDICTED: uncharacterized protein LOC109168170 [Ipomoea nil])

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-08
Identity = 35/73 (47.95%), Postives = 51/73 (69.86%), Query Frame = 0


Query: 242 SAKGKKIWVELTDLSLVRHLGLVKDVLVRVDDLLFPMDFYVVNVNTSSPPFELSVMLGRP 301
           S +G +I V+L D S V  +G+V+DVLV+V+ L+FP+DFYV+ +N  +      ++LGRP
Sbjct: 402 SLQGTRIVVQLADRSCVHPVGVVEDVLVQVNGLVFPVDFYVLKMNDDAIDQSTPILLGRP 461

Query: 302 FLKATKVVIDVDK 315
           F+K  K  IDVDK
Sbjct: 462 FMKTAKTKIDVDK 474

The following BLAST results are available for this feature:

BLAST of PI0016884 vs.


Match Name	E-value	Identity	Description

BLAST of PI0016884 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6P6TRI6	3.4e-09	35.40	uncharacterized protein LOC113703816 OS=Coffea arabica OX=13443 GN=LOC113703816 ...	[more]
A0A6P6T0V8	4.9e-08	34.51	uncharacterized protein LOC113696456 OS=Coffea arabica OX=13443 GN=LOC113696456 ...	[more]
A0A6S7NPW3	1.1e-07	49.21	Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS28532 PE=4 SV=1	[more]
A0A392NH73	1.4e-07	41.10	Uncharacterized protein OS=Trifolium medium OX=97028 GN=A2U01_0018861 PE=4 SV=1	[more]
A0A6P6WYZ4	1.4e-07	32.74	uncharacterized protein LOC113735952 OS=Coffea arabica OX=13443 GN=LOC113735952 ...	[more]

BLAST of PI0016884 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890303.1	1.0e-20	33.93	uncharacterized protein LOC120079919 [Benincasa hispida]	[more]
XP_038887084.1	1.1e-09	43.21	uncharacterized protein LOC120077260 [Benincasa hispida]	[more]
XP_012435389.1	3.2e-09	30.98	PREDICTED: uncharacterized protein LOC105762011 [Gossypium raimondii]	[more]
XP_027081098.1	7.1e-09	35.40	uncharacterized protein LOC113703816 [Coffea arabica]	[more]
XP_019172756.1	1.6e-08	47.95	PREDICTED: uncharacterized protein LOC109168170 [Ipomoea nil]	[more]

BLAST of PI0016884 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 231..333 e-value: 2.3E-9 score: 39.0

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016884.1	PI0016884.1	mRNA