PI0016836 (gene) Melon (PI 482460) v1

Overview


Name	PI0016836
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	RGG repeats nuclear RNA binding protein A-like
Location	chr11: 2081046 .. 2086141 (+)
RNA-Seq Expression	PI0016836
Synteny	PI0016836

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACCACAAATCCATTTGATTTGTTGGGTGATGACGATGCTGAGGACCCATCGCAGCTAATGGCTGTCAAGCAGGCGGCGGCGGTGGCGCCTAAGAAAGGTTCTGATCATCCTCAGGCTAAACAACAGGCGGCTGCGGCAGCTAAATTGAGTAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCGCCTGCTCAGGCTGGTTAGTTTCGATGTTTTTTTAATTGGAGGTTATGGATTGTGTAAATATCAGAGTTCGATTTTGATGTATCGTTTTGTTCCTTTTGCTTTCCTGTCTAAGTTGATTGGTTTTTCATTTGTGATTTTGGTTGTTGTTTTGTTCAAGTTTTTTGTCTGCTTGTTTGCATGGTTACATTGTTTGCGCCTATGGGAGACTGCGAAGTTTTTTTTGGTGATGTTAGATATATACATACACGTAGGAGTGAGTGATTTTAAATTCAGTCAAAATGTTGTAAGCTATATAATTACTTTCTGCGATAGGGTTGTAATAGTTAATAGCCGGCTGGGATTTATTGTGTATTCCTACAATCCAAGACCCTGCATTCCAAATTTATTTGTAATTCAGATAATATTCAATGGCTTGTATGTTTGGAACATAAATGAAATTGAATTATCAATACTTCTTTTTTAAAATTTTTTGGAAGAAATTTGAGCGTCAGTCAGCAATGTTGCTGTGATTTTATAACGTACTAGTTTATGAATTTTTTCTGTACATTGTTTAGCTATTATTTTCTTTTTTCTTATTATGCTATTTTCCCTTTGCCTGTGGCAATCGAAAGAATTTGAATATTTTGATAATTTATGTACAAGTCTTTAATAAAGAACCTAGCTTTCATTGAGAAATATGAAAGAACGTACTAGGGCATACCAAAAACAAACGCTCCAAAAAGAGTTCCCAGTCCTAATAGTAAGAAAGGACCCAATCAAAGAATGAGACCAAGTTAGTAATCACCAAAAGCCTGATTAACGGATGTTCATAATGAAGAATTATAACCAACACCCTAGTGTTCCTCTCCAACCAAGTACTGCCTAAAATGGCAAAAATAGCTAGCCAGCTACTGCCACATAACTATTCATTTATCACGACAAGGAGGCTTCATAAGCATTTCCTTGTCACCCCGAACGTGAGCCAAGGCAAAGCAAAAAAATTTGAGAAAGAACAGTTCTACAGGGGCAATCCAACATGAAATGGTTGAGGTTCTCCTTTTCCTTCCGGTAAAGAATGCCATTAGTTCATTACAGGTGCAACAGTAAGATGAGTGTCTTGGTAGATGGTCCTGCATGCTCACTATCCCAAGCTGTCATGCAGAACTGCTAGACATTAATTTCACTTTTTTTCCCCTAAAAAAAAAAGAAAAAAGGAAAAATGAGTGGAAATGGGTTTCCCCTCTCCCAAGTATCCTCAAAATTTAAGTACACTAAATAGTTAATAAACTGGGATAACAATTAACAAAGGAGAGCCCGAAGCAATAACAGTCTAGTGGTGTTCGCTAGAATCTTTAAAGCTACAACTTGAAACTCCACCTAGAGGCTATGATCCATAGTTGGTCAGAATAATCCTATGCATATGTTACTGACTTTCAGCCCCATGAAGAAATGTCAACCATTTTGCTAACGATTGCCAATGCCTCAACCCTCTAGATCAACTAATTTTGACTCAACCTCCCCCACCCTTATTTACTCCTTCCCACAAGATGTTTCTTATTAATCTTTCATTTTTCTTACTGATTGAGACAAACATTCTAAGCATGCAAGGGAAGTAGATTGGGATCGTACTCAACACTAATTGGGTCGATGTAAGCTTTTCCCCTTAAGAAAGGCATTTCTCTATGGTTTTTGAATTTTCGCTACCACAGGGTCCCAAGAAGGCGAACTATTTATTTTGATTACAATTACCCCCAAGGGAAGTCCAAGGTGGGAACAGGGAAGCTGACTTATCTCACGACTGAGCAAATTTGACCCAAGGGGACAAACTTAGAAGGCTCACAATTTAGACCAATGATGGAGGTTTTGCACTCTATTAATTTTAAGGCTTGAGATATGTTCAGGACAAGAAACCACTAAGATTCGTAAAGGAACTATGCAATTGCTATATATATATATTGACGATATCCAATTGGTATAATTTATGCACAAGTTGAATTGAAATGTTCTGGTTGGCTCTTGATATATGTTCTTTTGCATTATTTTCTTGATGAAAGGTCCTTGTTTTCAATATTTACCTTAAAGAGGAATTGATGTATTTGATTTCTTTGTATGATTTATTGGTGGAAAATTCCATTTTTATCTAAAGAAGTCATGTTTTGCCGGAACAAATTGTAGGACTGTGTGAACAAATATTTGCATGGATACCCAAATCGTGGGCTGTTGTAAAGAACTGGTTGGTCTCTGTACTGCATTTTTTAATATTCCTGGTTCTTAATATAGGACTGGGTAGTCTGCAGTCAATTTTTTATTCCATCTTGAACATAGCTTTGCCTTGTATCATATTGCCCATATTATGCTATTATTTATCAACAGAGTCTTCCTTATTCTATTGGGTTCTTATGAGTGTCCTGAATCCTGCCCAATTGTTATCAATTATTCATTGGGTAACTGAAAGAATGTTTTTTTTTTAATTTTTTTTTTTTATACTTTGAGTAGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATGGACGAGGGCGTGGCAGTGGTGGCTTTAATCGTGAGTCTGCAAATAATGAGTACTCATTTAGTAGTAACCCTGAAGATGGAGAAACTGGAAGGACAACAGAAAAGCGTGGTGGATATAGTGGACCTCGTGGTCGTGCTAGCCGTCGTGGTGGTTTTTATAATGGAGATGCTGCTGATGGTGAACGCCCTCGTGGTGTATTTGAACGGCACAGTGGAACTGGCCGTGGGTGAGTGTTCTTTTTCAAGAAAACATCAGATTATGCTATGCGTCTGTATCTTCTACTCTGTTTTGATATCTTCGGCCTGTTTTATACCTTAGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGGAATTGGGGAAGGTCGACTGATGAATTTCCTGAGTAAGTACATCCCTACGTTTTTTATGTTTCTGTATGTGTGGCCTGGTTCTTTTCTTTTTTTTCTCCTATAATGTTTGGCTGGGAGGCAGATGTTACTGGAAGTTGTATGCTTTTTCGAACTCTTGTATGCTAAGAGGCTAGCTTGTTTTGCATACAGGGTTGCTGAGGAAGCTAATGAATCTCAGAAGTTAGGTGATGAGAAGCCCATTCACGAGGATGATACTGCAGGTGTCAACACAGAGAACACTGCAAAAGAAACGGAGGAAAAAGAACCAGAAGACAAGGTTTGTGTTGTCAGGTTTCTTGGTAGACTTCACTTAAACCTGCAGCCTACCGTTTTACTTGCCATTGGTTTTTCTTGTTGACTGAAAATTAATTTGTAGTTTTGCTTGCTTATCAAACAAATTGAATGGGCATTAATAACCTGAGTAGTAGTAATACAGTGGTGGGTTAGGATTATGAACTTCGCTCTATGTTCAGCATGATTTTGAATCTACCTCGTACTCTTTCTTTTCCCCTAATACAGGAAATGACTCTGGAGGAGTACGAAAAATTGCTGGAAGAGAAAAGGAAGTCCCTTTTGGCACTGAAAACTGAAGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCTTGCAACAGCTATCAAGCAAAAAGGAAAACCAGGACGTCTTTATTAAATTGGTACATCTATTTGATCTTCCTTTGGAGTTGAAATTATATATTGATATTGCTCCTATGGATGACCCTGGCTCCTTGATATATTGGTATGGTCTTGGACATGGCTGCTGAATCTTCATTTCACCACTTGTAGGGATCTGACAAGGATAAGCGAAAAGAAACTGCAGATAAGGAGGAAAGAACTAAGAAGGTATTTCCTCTTGTCTATTACATGATTTCCTGTCCATTGCATTGGTTTTTAAAGTTTAGTTCTCAACCGAAAAAAAATGTTCTATTGTGATGCCTTTTACTGCTTCTATTTGTAACCATTGAATGACGAAATTGAAGTGTGTATACTTCGTATAATTTACTTGTATTACTTCTGTGGATACACTCTCCTATTTGGAACAAAGCTTAAAAGAGAGGGAGTTTGGGTCGTCAGTTCAACATCCTAACTCAGGTTTAGTTGGTGAAGTTTGTGATAAGGAAAATTGGGTGTTACAACCTTACCTCAACGGGATGATCCTTTTGTCCAATTGTGTCTTTGAGTTCTAAGGAGAACGGGGTGTTGGGAGTTCCGAGAATGGTTACTATTCTCAAGCCTGTTGGGTTCTTCAAGGAAACTTGGTTTTGGCGATTGGCTTAGGAAGCCAAACTCATGCTCCCAAATGCCTAAAAAATTTACGAACTACAGCTAAGAAACGAGTTCGTTTATGAATTGAAGGTTTTGCACAACTTGGTTCTAATAAAACAACACTTCCGTTATTGTAACTTAAATTCTGCTCATACTTGAATAATTTAATGATCAACAAAGTACTGATTTTTTGTTGTTGTTTTCGTCTATTTTTGTAGTCCGTGAGTATCAATGAGTTCTTGAAGCCAGCCGGAGGAGAGAGACACTACAATCCAGGTGGTAGGGGTAGAGGCCGGGGCCGTGGTTCAAGGGGAGGAGGTTATGTCGGCAGCTCGGTGAGCAGCAATGTTGCAGCCCCGTCGATTGAGGATCCGGGGCATTTCCCAACCTTAGGTGCAAAATGAATATTCTGAATAAATTGCACTCAAAACTGTGTATATGGTTTTGGGGGCTCTCTTTGATCTGGGGGAATGGCAAGAAGTTGAGTAGAATAATTAGAGTTTTTCTTTCCTAATGTATTAAAAAAAAAAGTTAAAAAGTTAAATTTGTTTGAATGTAAATTGTCAAAGCCATGTATTTTTCCTTTGTCACACTTTTTCATTATGTGTTTTTTCCAACTGACTTGCCAGATCAAACTATTTATTTACGACATTTTAGCTTATACCATAATTCTCTATTTCCAAA

mRNA sequence

ATGGCGACCACAAATCCATTTGATTTGTTGGGTGATGACGATGCTGAGGACCCATCGCAGCTAATGGCTGTCAAGCAGGCGGCGGCGGTGGCGCCTAAGAAAGGTTCTGATCATCCTCAGGCTAAACAACAGGCGGCTGCGGCAGCTAAATTGAGTAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCGCCTGCTCAGGCTGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATGGACGAGGGCGTGGCAGTGGTGGCTTTAATCGTGAGTCTGCAAATAATGAGTACTCATTTAGTAGTAACCCTGAAGATGGAGAAACTGGAAGGACAACAGAAAAGCGTGGTGGATATAGTGGACCTCGTGGTCGTGCTAGCCGTCGTGGTGGTTTTTATAATGGAGATGCTGCTGATGGTGAACGCCCTCGTGGTGTATTTGAACGGCACAGTGGAACTGGCCGTGGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGGAATTGGGGAAGGTCGACTGATGAATTTCCTGAGGTTGCTGAGGAAGCTAATGAATCTCAGAAGTTAGGTGATGAGAAGCCCATTCACGAGGATGATACTGCAGGTGTCAACACAGAGAACACTGCAAAAGAAACGGAGGAAAAAGAACCAGAAGACAAGGTTTGTGTTGTCAGGTTTCTTGGTAGACTTCACTTAAACCTGCAGCCTACCGTTTTACTTGCCATTGGTTTTTCTTGTTGACTGAAAATTAATTTGTAGTTTTGCTTGCTTATCAAACAAATTGAATGGGCATTAATAACCTGAGTAGTAGTAATACAGTGGTGGGTTAGGATTATGAACTTCGCTCTATGTTCAGCATGATTTTGAATCTACCTCGTACTCTTTCTTTTCCCCTAATACAGGAAATGACTCTGGAGGAGTACGAAAAATTGCTGGAAGAGAAAAGGAAGTCCCTTTTGGCACTGAAAACTGAAGAGAGGAAGGTGGATCCTAAAGAATTTGCATCCTTGCAACAGCTATCAAGCAAAAAGGAAAACCAGGACGTCTTTATTAAATTGGGATCTGACAAGGATAAGCGAAAAGAAACTGCAGATAAGGAGGAAAGAACTAAGAAGTCCGTGAGTATCAATGAGTTCTTGAAGCCAGCCGGAGGAGAGAGACACTACAATCCAGGTGGTAGGGGTAGAGGCCGGGGCCGTGGTTCAAGGGGAGGAGGTTATGTCGGCAGCTCGGTGAGCAGCAATGTTGCAGCCCCGTCGATTGAGGATCCGGGGCATTTCCCAACCTTAGGTGCAAAATGAATATTCTGAATAAATTGCACTCAAAACTGTGTATATGGTTTTGGGGGCTCTCTTTGATCTGGGGGAATGGCAAGAAGTTGAGTAGAATAATTAGAGTTTTTCTTTCCTAATGTATTAAAAAAAAAAGTTAAAAAGTTAAATTTGTTTGAATGTAAATTGTCAAAGCCATGTATTTTTCCTTTGTCACACTTTTTCATTATGTGTTTTTTCCAACTGACTTGCCAGATCAAACTATTTATTTACGACATTTTAGCTTATACCATAATTCTCTATTTCCAAA

Coding sequence (CDS)

ATGGCGACCACAAATCCATTTGATTTGTTGGGTGATGACGATGCTGAGGACCCATCGCAGCTAATGGCTGTCAAGCAGGCGGCGGCGGTGGCGCCTAAGAAAGGTTCTGATCATCCTCAGGCTAAACAACAGGCGGCTGCGGCAGCTAAATTGAGTAAACCTGCTAATCTTCCTTCCAAGCCTCTTCCGCCTGCTCAGGCTGTAAGGGAAGCAAAGAATGAAGGTGGTCGTGGAGGTCGTGGTAGTGGGCGTGGTGGAGGTGGACGTGGATATGGACGAGGGCGTGGCAGTGGTGGCTTTAATCGTGAGTCTGCAAATAATGAGTACTCATTTAGTAGTAACCCTGAAGATGGAGAAACTGGAAGGACAACAGAAAAGCGTGGTGGATATAGTGGACCTCGTGGTCGTGCTAGCCGTCGTGGTGGTTTTTATAATGGAGATGCTGCTGATGGTGAACGCCCTCGTGGTGTATTTGAACGGCACAGTGGAACTGGCCGTGGAAATGAATTCAAGCGTGAAGGGTCTGGGCGTGGGAATTGGGGAAGGTCGACTGATGAATTTCCTGAGGTTGCTGAGGAAGCTAATGAATCTCAGAAGTTAGGTGATGAGAAGCCCATTCACGAGGATGATACTGCAGGTGTCAACACAGAGAACACTGCAAAAGAAACGGAGGAAAAAGAACCAGAAGACAAGGTTTGTGTTGTCAGGTTTCTTGGTAGACTTCACTTAAACCTGCAGCCTACCGTTTTACTTGCCATTGGTTTTTCTTGTTGA

Protein sequence

MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSKPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGETGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNWGRSTDEFPEVAEEANESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDKVCVVRFLGRLHLNLQPTVLLAIGFSC

Homology

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BLAST of PI0016836 vs. ExPASy Swiss-Prot
Match: O23523 (RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGGA PE=1 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-33
Identity = 121/245 (49.39%), Postives = 149/245 (60.82%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MAT NPFDLL DDDAEDPSQL       AVA +K     ++ Q ++  AK S P  LPSK
Sbjct: 1   MATLNPFDLL-DDDAEDPSQL-------AVAIEKIDKSKKSGQVSSLPAK-SAP-KLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYS--FSSNPEDG 120
           PLPPAQAVREA+++       + RGGGGRG G  RG GG+NR+  NN YS  ++    +G
Sbjct: 61  PLPPAQAVREARSD-------APRGGGGRG-GFNRGRGGYNRDDGNNGYSGGYTKPSGEG 120

Query: 121 ETGRTT-EKRGGYSGPRGR---------ASRRGGFYNGDAADGERPRGVFERHSGTGRGN 180
           +  +++ E+RGG   PRG            RRGGF N +  DGERPR  FER SGTGRG+
Sbjct: 121 DVSKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGS 180

Query: 181 EFKREGSGRGNWGRSTDEFPEVAEEAN--ESQKLGDEKPIHEDDTAGVNTENTAKETEEK 232
           +FKR+GSGRGNWG   +E     E     E++K   EKP  +D  A  N E+T    EEK
Sbjct: 181 DFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAVDDVAADANKEDTV--VEEK 224

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BLAST of PI0016836 vs. ExPASy Swiss-Prot
Match: Q9SQ56 (RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=4097 GN=RggA PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 7.6e-29
Identity = 93/171 (54.39%), Postives = 116/171 (67.84%), Query Frame = 0


Query: 78  GGRGSGRGGG-GRGYGRGRGSGGFNRESANNEYSFSSN---------PEDGETGRTTEKR 137
           GGRG  RGGG GRG GRGR   GFN+ESA++E +F SN          EDGE+G+ +E+R
Sbjct: 3   GGRGGPRGGGRGRGPGRGR---GFNQESADDENAFGSNNGFSGRYRVQEDGESGKLSERR 62

Query: 138 GGYSGPRG--RASRRGGFYNGDAA--DGERPRGVFERHSGTGRGNEF-KREGSGRGNWGR 197
           GGY GPRG     RRGGF NGDAA  +GERPR VF+R SGTGRGNE+ KREGSGRGNWG 
Sbjct: 63  GGYGGPRGGFHGGRRGGFNNGDAAEGEGERPRRVFDRRSGTGRGNEYIKREGSGRGNWGT 122

Query: 198 STDEFPEVAE-EANESQKLGD-EKPIHEDDTAGVNTENTAKETEEKEPEDK 232
             D+  +  E   N+ +K+ + EK   +++    N ++TA E EEKEPE+K
Sbjct: 123 PADDIAQETEVPVNDGEKIVEAEKEAGQEEAEDTNKDSTAAEPEEKEPEEK 170

[Close]

BLAST of PI0016836 vs. ExPASy Swiss-Prot
Match: O23593 (RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGGB PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 108/237 (45.57%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MA+ NPFDLL DDDAEDPSQ++A K    VAP                 + +K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASKPLKVVAP----------------VQTAKSGKMPTK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           P PP+QAVREA+N  G GGRG+GRGG    YGRG G GG NR+S NN+   + N   G  
Sbjct: 61  PPPPSQAVREARNAPG-GGRGAGRGG---SYGRG-GRGGNNRDSRNNDGPANENGYGGGY 120

Query: 121 GRTTEKRGG-YSGPRG--RASRRGGFYN-GDAADGERPRGVFERHSGTGRGNEFKREGSG 180
            R+ E  G    GP G  R  RRG + N GD+ D ERPR  ++RHS T  GNE KR+G+G
Sbjct: 121 RRSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAG 180

Query: 181 RGNWGRSTDEFPEVAEEANE--SQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           R NWG + D+   V EE+     + L  EK   E +      E  A++ EEK PEDK
Sbjct: 181 RANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEK-PEDK 214

[Close]

BLAST of PI0016836 vs. ExPASy Swiss-Prot
Match: Q9LVT8 (RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGGC PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-28
Identity = 108/244 (44.26%), Postives = 139/244 (56.97%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQL-----AVALS--------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDG 120
           P PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+GG+NR++ NN+   + N   G
Sbjct: 61  PAPPSQAVRESRNAPQGGRGGTG-GRG----GFSRGRGNGGYNRDNRNNDAPGNENGFSG 120

Query: 121 ETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGN 180
              R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G 
Sbjct: 121 GYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGT 180

Query: 181 EFKREGSGRGNWGRSTDEFPEVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEK 231
             KR G GRGNWG + D+ P  +EE     +     EK   ED+T     E TA+E  +K
Sbjct: 181 GMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQK 225

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BLAST of PI0016836 vs. ExPASy TrEMBL
Match: A0A1S3CC85 (H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103498822 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.1e-110
Identity = 221/232 (95.26%), Postives = 225/232 (96.98%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQ-AAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPS 60
           MATTNPFDLLGDDDAEDPSQLMAVKQ AAAVAPKKGSDHPQAKQQAAAAAKL+KPANLPS
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAVAPKKGSDHPQAKQQAAAAAKLNKPANLPS 60

Query: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGE 120
           KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRE+ANNEYSFSSNPEDGE
Sbjct: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNREAANNEYSFSSNPEDGE 120

Query: 121 TGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGN 180
           TGRTTEKRGGY GPRGR  RRGGFYNGD  DGERPRGVFERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTDDGERPRGVFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFPEVAEEANESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           WGRSTDEFPEVAEEANESQKLGDEKP+HED TAGVNTENTAKE+EEKEPEDK
Sbjct: 181 WGRSTDEFPEVAEEANESQKLGDEKPVHEDGTAGVNTENTAKESEEKEPEDK 232

[Close]

BLAST of PI0016836 vs. ExPASy TrEMBL
Match: A0A0A0KCI2 (HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G105680 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.2e-106
Identity = 216/231 (93.51%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQLMAVKQAAA APKKGSDHPQAKQQAAAAAKLSKPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAA-APKKGSDHPQAKQQAAAAAKLSKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGR SGR  GGRGYGRGRGSGGFNRES NNEYSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGR--GGRGYGRGRGSGGFNRESPNNEYSFSSNPEDGET 120

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTEKRGGY GPRGR  RRGGFYNGD ADGERPRG FERHSGTGRGNEFKREGSGRGNW
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGNW 180

Query: 181 GRSTDEFPEVAEEANESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           GRS +EFPEVAEEANESQKLGDEKP+HEDDTAGVNTEN AKE+EEKEPEDK
Sbjct: 181 GRSAEEFPEVAEEANESQKLGDEKPVHEDDTAGVNTENPAKESEEKEPEDK 228

[Close]

BLAST of PI0016836 vs. ExPASy TrEMBL
Match: A0A6J1DV55 (RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN=LOC111023798 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 9.1e-86
Identity = 188/233 (80.69%), Postives = 202/233 (86.70%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MAT NPFDLLGDDDAEDPSQL+A KQ A    KKGSDH  AK QA AA K +KPANLPSK
Sbjct: 1   MATMNPFDLLGDDDAEDPSQLIAAKQVAPPPLKKGSDHGLAK-QAPAAPKHNKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKN+GGRGGRGS RGGGGRGYGRGR SGGFNR+SA+N+YSFSS PEDGET
Sbjct: 61  PLPPAQAVREAKNDGGRGGRGSRRGGGGRGYGRGRSSGGFNRDSASNDYSFSSPPEDGET 120

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTE R GY GPRGR  RRGGF NG+ ADGE PRG FERHSGTGRGNEFKREG+GRGNW
Sbjct: 121 GRTTE-RHGYGGPRGRGGRRGGFNNGEVADGEYPRGGFERHSGTGRGNEFKREGAGRGNW 180

Query: 181 GRSTDEFPEVAEE-ANESQ-KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           GR  DEF EVAEE  NE++ K+GDEKP+HEDDTAGVNTEN+AKE+EEKEPEDK
Sbjct: 181 GRQNDEFSEVAEEVVNETEKKVGDEKPVHEDDTAGVNTENSAKESEEKEPEDK 231

[Close]

BLAST of PI0016836 vs. ExPASy TrEMBL
Match: A0A6J1EYL0 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=LOC111439719 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.6e-85
Identity = 186/232 (80.17%), Postives = 199/232 (85.78%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQL+A K AA V  +KGSDHPQ K QAAAAAK +KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAAVVLSRKGSDHPQGK-QAAAAAKQNKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGRGSGRGGGG GYGRGRGSGGFNRE   N+YSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGYGYGRGRGSGGFNREFPYNDYSFSSNPEDGET 120

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTEKRGGY GPRGR  RRGGF NG+A+DGER RG FER S TG GN+FKREGSGRGNW
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFNNGEASDGERFRGAFERQSETGYGNDFKREGSGRGNW 180

Query: 181 GRSTDEFPEVAEEANESQ-KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           GR TDEF E AEE NE+Q K+GDEKP+HEDD      E++AK+ EEKEPEDK
Sbjct: 181 GRPTDEFSEGAEEVNETQKKVGDEKPVHEDD------ESSAKQLEEKEPEDK 225

[Close]

BLAST of PI0016836 vs. ExPASy TrEMBL
Match: A0A6J1I9V5 (RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LOC111472477 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 2.7e-82
Identity = 181/232 (78.02%), Postives = 197/232 (84.91%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQL+A K AAAV  +K SDHPQ K QAAAAAK +KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAAAVLSRKASDHPQGK-QAAAAAKQNKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGG GSGRGGG  GYG+GR SGGFNRE   N+YSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGSGSGRGGGRYGYGQGRVSGGFNREFPYNDYSFSSNPEDGET 120

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTEKRGGY GPRGR  RRGGF NG+A++GER RG FER SGTG GN+FKREGSGRGNW
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFTNGEASEGERFRGAFERQSGTGYGNDFKREGSGRGNW 180

Query: 181 GRSTDEFPEVAEEANESQ-KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           GR T+EF E AEE NE+Q K+GDEKP+HEDD      +N+AK+ EEKEPEDK
Sbjct: 181 GRPTNEFSEGAEEVNETQKKVGDEKPVHEDD------QNSAKQLEEKEPEDK 225

[Close]

BLAST of PI0016836 vs. NCBI nr
Match: XP_008459800.1 (PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo])

HSP 1 Score: 409.5 bits (1051), Expect = 2.2e-110
Identity = 221/232 (95.26%), Postives = 225/232 (96.98%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQ-AAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPS 60
           MATTNPFDLLGDDDAEDPSQLMAVKQ AAAVAPKKGSDHPQAKQQAAAAAKL+KPANLPS
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAAVAPKKGSDHPQAKQQAAAAAKLNKPANLPS 60

Query: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGE 120
           KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRE+ANNEYSFSSNPEDGE
Sbjct: 61  KPLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNREAANNEYSFSSNPEDGE 120

Query: 121 TGRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGN 180
           TGRTTEKRGGY GPRGR  RRGGFYNGD  DGERPRGVFERHSGTGRGNEFKREGSGRGN
Sbjct: 121 TGRTTEKRGGYGGPRGRGGRRGGFYNGDTDDGERPRGVFERHSGTGRGNEFKREGSGRGN 180

Query: 181 WGRSTDEFPEVAEEANESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           WGRSTDEFPEVAEEANESQKLGDEKP+HED TAGVNTENTAKE+EEKEPEDK
Sbjct: 181 WGRSTDEFPEVAEEANESQKLGDEKPVHEDGTAGVNTENTAKESEEKEPEDK 232

[Close]

BLAST of PI0016836 vs. NCBI nr
Match: XP_004150996.1 (RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN46514.1 hypothetical protein Csa_005350 [Cucumis sativus])

HSP 1 Score: 396.0 bits (1016), Expect = 2.5e-106
Identity = 216/231 (93.51%), Postives = 219/231 (94.81%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQLMAVKQAAA APKKGSDHPQAKQQAAAAAKLSKPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAA-APKKGSDHPQAKQQAAAAAKLSKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGR SGR  GGRGYGRGRGSGGFNRES NNEYSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRSSGR--GGRGYGRGRGSGGFNRESPNNEYSFSSNPEDGET 120

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTEKRGGY GPRGR  RRGGFYNGD ADGERPRG FERHSGTGRGNEFKREGSGRGNW
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFYNGDTADGERPRGAFERHSGTGRGNEFKREGSGRGNW 180

Query: 181 GRSTDEFPEVAEEANESQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           GRS +EFPEVAEEANESQKLGDEKP+HEDDTAGVNTEN AKE+EEKEPEDK
Sbjct: 181 GRSAEEFPEVAEEANESQKLGDEKPVHEDDTAGVNTENPAKESEEKEPEDK 228

[Close]

BLAST of PI0016836 vs. NCBI nr
Match: XP_038875941.1 (RGG repeats nuclear RNA binding protein A-like [Benincasa hispida])

HSP 1 Score: 373.2 bits (957), Expect = 1.8e-99
Identity = 204/232 (87.93%), Postives = 214/232 (92.24%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQL+A K AA  APKKGSDHPQAK QAAAAAKL+KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAAVAAPKKGSDHPQAK-QAAAAAKLNKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYG+GRGSGGFNRESANNEYSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGQGRGSGGFNRESANNEYSFSSNPEDGET 120

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTE+RGGY GPRGR  RRGGF NGDA DGE   G+FERHSGTGRGNEFKREGSGRGNW
Sbjct: 121 GRTTERRGGYGGPRGRGGRRGGFNNGDAVDGEHSHGLFERHSGTGRGNEFKREGSGRGNW 180

Query: 181 GRSTDEFPEVAEEANESQ-KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           G+ TDEFPEVAE  NES+ KLGDEKP+HE DTAGVNTEN+AKE+EEKEPEDK
Sbjct: 181 GKPTDEFPEVAEGVNESEKKLGDEKPVHEVDTAGVNTENSAKESEEKEPEDK 231

[Close]

BLAST of PI0016836 vs. NCBI nr
Match: KAG7011066.1 (RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 331.3 bits (848), Expect = 7.6e-87
Identity = 188/232 (81.03%), Postives = 201/232 (86.64%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQL+A K AAAV  +KGSDHPQ K QAAAAAK +KPANLPSK
Sbjct: 411 MATTNPFDLLGDDDAEDPSQLIAAKHAAAVLSRKGSDHPQGK-QAAAAAKQNKPANLPSK 470

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGRGSGRGGGG GYGRGRGSGGFNRE   N+YSFSSNPEDGET
Sbjct: 471 PLPPAQAVREAKNEGGRGGRGSGRGGGGYGYGRGRGSGGFNREFPYNDYSFSSNPEDGET 530

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTEKRGGY GPRGR  RRGGF NG+A+DGER RG FER SGTG GN+FKREGSGRGNW
Sbjct: 531 GRTTEKRGGYGGPRGRGGRRGGFNNGEASDGERFRGAFERQSGTGYGNDFKREGSGRGNW 590

Query: 181 GRSTDEFPEVAEEANESQ-KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           GR TDEF E AEE NE+Q K+GDEKP+HEDD      EN+A++ EEKEPEDK
Sbjct: 591 GRPTDEFSEGAEEVNETQKKVGDEKPVHEDD------ENSARQLEEKEPEDK 635

[Close]

BLAST of PI0016836 vs. NCBI nr
Match: XP_023520986.1 (RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.9 bits (847), Expect = 1.0e-86
Identity = 189/232 (81.47%), Postives = 200/232 (86.21%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MATTNPFDLLGDDDAEDPSQL+A K AAAV  +KGSDHPQ K QAAAAAK +KPANLPSK
Sbjct: 1   MATTNPFDLLGDDDAEDPSQLIAAKHAAAVLSRKGSDHPQGK-QAAAAAKQNKPANLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           PLPPAQAVREAKNEGGRGGRGSGRGGGG GYGRGRGSGGFNRE   N+YSFSSNPEDGET
Sbjct: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGYGYGRGRGSGGFNREFPYNDYSFSSNPEDGET 120

Query: 121 GRTTEKRGGYSGPRGRASRRGGFYNGDAADGERPRGVFERHSGTGRGNEFKREGSGRGNW 180
           GRTTEKRGGY GPRGR  RRGGF NG+A+DGER RG FER SGTG GN+FKREGSGRGNW
Sbjct: 121 GRTTEKRGGYGGPRGRGGRRGGFNNGEASDGERFRGAFERQSGTGYGNDFKREGSGRGNW 180

Query: 181 GRSTDEFPEVAEEANESQ-KLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           GRSTDEF   AEE NE Q K+GDEKP+HEDD      EN+AK+ EEKEPEDK
Sbjct: 181 GRSTDEFSAGAEEVNEIQKKVGDEKPVHEDD------ENSAKQLEEKEPEDK 225

[Close]

BLAST of PI0016836 vs. TAIR 10
Match: AT4G16830.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 143.7 bits (361), Expect = 2.1e-34
Identity = 121/245 (49.39%), Postives = 149/245 (60.82%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MAT NPFDLL DDDAEDPSQL       AVA +K     ++ Q ++  AK S P  LPSK
Sbjct: 1   MATLNPFDLL-DDDAEDPSQL-------AVAIEKIDKSKKSGQVSSLPAK-SAP-KLPSK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYS--FSSNPEDG 120
           PLPPAQAVREA+++       + RGGGGRG G  RG GG+NR+  NN YS  ++    +G
Sbjct: 61  PLPPAQAVREARSD-------APRGGGGRG-GFNRGRGGYNRDDGNNGYSGGYTKPSGEG 120

Query: 121 ETGRTT-EKRGGYSGPRGR---------ASRRGGFYNGDAADGERPRGVFERHSGTGRGN 180
           +  +++ E+RGG   PRG            RRGGF N +  DGERPR  FER SGTGRG+
Sbjct: 121 DVSKSSYERRGGGGAPRGSFRGEGGGPGGGRRGGFSN-EGGDGERPRRAFERRSGTGRGS 180

Query: 181 EFKREGSGRGNWGRSTDEFPEVAEEAN--ESQKLGDEKPIHEDDTAGVNTENTAKETEEK 232
           +FKR+GSGRGNWG   +E     E     E++K   EKP  +D  A  N E+T    EEK
Sbjct: 181 DFKRDGSGRGNWGTPGEEIAAETEAVAGVETEKDVGEKPAVDDVAADANKEDTV--VEEK 224

[Close]

BLAST of PI0016836 vs. TAIR 10
Match: AT4G17520.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 125.6 bits (314), Expect = 5.9e-29
Identity = 108/237 (45.57%), Postives = 135/237 (56.96%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MA+ NPFDLL DDDAEDPSQ++A K    VAP                 + +K   +P+K
Sbjct: 1   MASVNPFDLL-DDDAEDPSQIVASKPLKVVAP----------------VQTAKSGKMPTK 60

Query: 61  PLPPAQAVREAKNEGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDGET 120
           P PP+QAVREA+N  G GGRG+GRGG    YGRG G GG NR+S NN+   + N   G  
Sbjct: 61  PPPPSQAVREARNAPG-GGRGAGRGG---SYGRG-GRGGNNRDSRNNDGPANENGYGGGY 120

Query: 121 GRTTEKRGG-YSGPRG--RASRRGGFYN-GDAADGERPRGVFERHSGTGRGNEFKREGSG 180
            R+ E  G    GP G  R  RRG + N GD+ D ERPR  ++RHS T  GNE KR+G+G
Sbjct: 121 RRSEEGDGARRGGPVGGYRGDRRGSYSNGGDSGDSERPRKNYDRHSRTAYGNEDKRDGAG 180

Query: 181 RGNWGRSTDEFPEVAEEANE--SQKLGDEKPIHEDDTAGVNTENTAKETEEKEPEDK 232
           R NWG + D+   V EE+     + L  EK   E +      E  A++ EEK PEDK
Sbjct: 181 RANWGTTQDDITPVTEESTAVVDKNLTVEKQDGEGEATDAKNETPAEKAEEK-PEDK 214

[Close]

BLAST of PI0016836 vs. TAIR 10
Match: AT5G47210.1 (Hyaluronan / mRNA binding family )

HSP 1 Score: 125.6 bits (314), Expect = 5.9e-29
Identity = 108/244 (44.26%), Postives = 139/244 (56.97%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQL-----AVALS--------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDG 120
           P PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+GG+NR++ NN+   + N   G
Sbjct: 61  PAPPSQAVRESRNAPQGGRGGTG-GRG----GFSRGRGNGGYNRDNRNNDAPGNENGFSG 120

Query: 121 ETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGN 180
              R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G 
Sbjct: 121 GYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGT 180

Query: 181 EFKREGSGRGNWGRSTDEFPEVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEK 231
             KR G GRGNWG + D+ P  +EE     +     EK   ED+T     E TA+E  +K
Sbjct: 181 GMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQK 225

[Close]

BLAST of PI0016836 vs. TAIR 10
Match: AT5G47210.2 (Hyaluronan / mRNA binding family )

HSP 1 Score: 125.6 bits (314), Expect = 5.9e-29
Identity = 108/244 (44.26%), Postives = 139/244 (56.97%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQL-----AVALS--------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDG 120
           P PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+GG+NR++ NN+   + N   G
Sbjct: 61  PAPPSQAVRESRNAPQGGRGGTG-GRG----GFSRGRGNGGYNRDNRNNDAPGNENGFSG 120

Query: 121 ETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGN 180
              R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G 
Sbjct: 121 GYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGT 180

Query: 181 EFKREGSGRGNWGRSTDEFPEVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEK 231
             KR G GRGNWG + D+ P  +EE     +     EK   ED+T     E TA+E  +K
Sbjct: 181 GMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQK 225

[Close]

BLAST of PI0016836 vs. TAIR 10
Match: AT5G47210.3 (Hyaluronan / mRNA binding family )

HSP 1 Score: 125.6 bits (314), Expect = 5.9e-29
Identity = 108/244 (44.26%), Postives = 139/244 (56.97%), Query Frame = 0


Query: 1   MATTNPFDLLGDDDAEDPSQLMAVKQAAAVAPKKGSDHPQAKQQAAAAAKLSKPANLPSK 60
           MA+ NPFDLLG DDAEDPSQL     A A++        Q  ++AAAA +  K A  P+K
Sbjct: 1   MASLNPFDLLG-DDAEDPSQL-----AVALS--------QKVEKAAAAVQPPKAAKFPTK 60

Query: 61  PLPPAQAVREAKN--EGGRGGRGSGRGGGGRGYGRGRGSGGFNRESANNEYSFSSNPEDG 120
           P PP+QAVRE++N  +GGRGG G GRG    G+ RGRG+GG+NR++ NN+   + N   G
Sbjct: 61  PAPPSQAVRESRNAPQGGRGGTG-GRG----GFSRGRGNGGYNRDNRNNDAPGNENGFSG 120

Query: 121 ETGRTTEKR---------GGYSGPRGR-ASRRGGFYNGDAADGERPRGVFERHSGTGRGN 180
              R +E           GGY    GR   RRGG  NG++ D ERP   ++RHS TG G 
Sbjct: 121 GYRRPSEDADGASRGGSVGGYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGT 180

Query: 181 EFKREGSGRGNWGRSTDEFPEVAEEANESQKLGD--EKPIHEDDTAGVNTENTAKETEEK 231
             KR G GRGNWG + D+ P  +EE     +     EK   ED+T     E TA+E  +K
Sbjct: 181 GMKRNGGGRGNWGTTEDDIPPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQK 225

The following BLAST results are available for this feature:

BLAST of PI0016836 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23523	3.0e-33	49.39	RGG repeats nuclear RNA binding protein A OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9SQ56	7.6e-29	54.39	RGG repeats nuclear RNA binding protein A (Fragment) OS=Nicotiana tabacum OX=409...	[more]
O23593	8.3e-28	45.57	RGG repeats nuclear RNA binding protein B OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]
Q9LVT8	8.3e-28	44.26	RGG repeats nuclear RNA binding protein C OS=Arabidopsis thaliana OX=3702 GN=RGG...	[more]

BLAST of PI0016836 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CC85	1.1e-110	95.26	H/ACA ribonucleoprotein complex subunit 1-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KCI2	1.2e-106	93.51	HABP4_PAI-RBP1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G105...	[more]
A0A6J1DV55	9.1e-86	80.69	RGG repeats nuclear RNA binding protein A-like OS=Momordica charantia OX=3673 GN...	[more]
A0A6J1EYL0	1.6e-85	80.17	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1I9V5	2.7e-82	78.02	RGG repeats nuclear RNA binding protein A-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of PI0016836 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008459800.1	2.2e-110	95.26	PREDICTED: H/ACA ribonucleoprotein complex subunit 1-like [Cucumis melo]	[more]
XP_004150996.1	2.5e-106	93.51	RGG repeats nuclear RNA binding protein A [Cucumis sativus] >KGN46514.1 hypothet...	[more]
XP_038875941.1	1.8e-99	87.93	RGG repeats nuclear RNA binding protein A-like [Benincasa hispida]	[more]
KAG7011066.1	7.6e-87	81.03	RGG repeats nuclear RNA binding protein B [Cucurbita argyrosperma subsp. argyros...	[more]
XP_023520986.1	1.0e-86	81.47	RGG repeats nuclear RNA binding protein A-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of PI0016836 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16830.1	2.1e-34	49.39	Hyaluronan / mRNA binding family	[more]
AT4G17520.1	5.9e-29	45.57	Hyaluronan / mRNA binding family	[more]
AT5G47210.1	5.9e-29	44.26	Hyaluronan / mRNA binding family	[more]
AT5G47210.2	5.9e-29	44.26	Hyaluronan / mRNA binding family	[more]
AT5G47210.3	5.9e-29	44.26	Hyaluronan / mRNA binding family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006861	Hyaluronan/mRNA-binding protein	PFAM	PF04774	HABP4_PAI-RBP1	coord: 155..229 e-value: 7.7E-14 score: 52.5
IPR019084	Stm1-like, N-terminal	PFAM	PF09598	Stm1_N	coord: 1..81 e-value: 6.6E-21 score: 74.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 186..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..179
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..229
None	No IPR available	PANTHER	PTHR12299:SF64	PLASMINOGEN ACTIVATOR INHIBITOR 1 RNA-BINDING PROTEIN-LIKE	coord: 1..232
IPR039764	RNA binding protein HABP4/SERBP1	PANTHER	PTHR12299	HYALURONIC ACID-BINDING PROTEIN 4	coord: 1..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016836.1	PI0016836.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003723	RNA binding