PI0016805 (gene) Melon (PI 482460) v1

Overview
NamePI0016805
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr07: 20940810 .. 20940983 (+)
RNA-Seq ExpressionPI0016805
SyntenyPI0016805
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGACAATCACTGGAGTTGGTTGTCCGAAGTTCGCTGGTGGAGTCACAAGAGGTGTTGGTCAGAGATTGACCGACAACGATCAGCAGAGGTGGTGTCCAAAAATTGATCGAAGAATTTTCCAACCCTTGAAACAAATGCCCCTAGGGTTGAAGAATAGTAAGAACATATGA

mRNA sequence

ATGGCGACAATCACTGGAGTTGGTTGTCCGAAGTTCGCTGGTGGAGTCACAAGAGGTGTTGGTCAGAGATTGACCGACAACGATCAGCAGAGGTGGTGTCCAAAAATTGATCGAAGAATTTTCCAACCCTTGAAACAAATGCCCCTAGGGTTGAAGAATAGTAAGAACATATGA

Coding sequence (CDS)

ATGGCGACAATCACTGGAGTTGGTTGTCCGAAGTTCGCTGGTGGAGTCACAAGAGGTGTTGGTCAGAGATTGACCGACAACGATCAGCAGAGGTGGTGTCCAAAAATTGATCGAAGAATTTTCCAACCCTTGAAACAAATGCCCCTAGGGTTGAAGAATAGTAAGAACATATGA

Protein sequence

MATITGVGCPKFAGGVTRGVGQRLTDNDQQRWCPKIDRRIFQPLKQMPLGLKNSKNI
Homology
BLAST of PI0016805 vs. ExPASy TrEMBL
Match: A0A0A0KLK7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175950 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 2.5e-04
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 1  MATITGVGCPKFAGGVTRGVGQ-RLTDNDQQRWCPKIDRRIFQPLKQMPLGLKNSKN 57
          +AT+  V C KF  GVT G GQ  LT++D Q   PKIDR+  Q LKQ+ LGLKNS +
Sbjct: 7  LATVAKVDCRKFTTGVTEGGGQSSLTEDDHQ--IPKIDRQTSQSLKQILLGLKNSND 61

BLAST of PI0016805 vs. ExPASy TrEMBL
Match: A0A0A0KRX7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G587100 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 5.6e-04
Identity = 22/39 (56.41%), Postives = 29/39 (74.36%), Query Frame = 0

Query: 11 KFAGGVTRGVGQRLTDNDQQRWCPKIDRRIFQPLKQMPL 50
          +F  GVTRG G RL ++D +RWC K+DR  FQP+KQ+ L
Sbjct: 23 RFVNGVTRGGGWRLANDDHRRWCSKVDRPTFQPVKQILL 61

BLAST of PI0016805 vs. NCBI nr
Match: KGN50473.1 (hypothetical protein Csa_000457 [Cucumis sativus])

HSP 1 Score: 53.9 bits (128), Expect = 5.2e-04
Identity = 31/57 (54.39%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 1  MATITGVGCPKFAGGVTRGVGQ-RLTDNDQQRWCPKIDRRIFQPLKQMPLGLKNSKN 57
          +AT+  V C KF  GVT G GQ  LT++D Q   PKIDR+  Q LKQ+ LGLKNS +
Sbjct: 7  LATVAKVDCRKFTTGVTEGGGQSSLTEDDHQ--IPKIDRQTSQSLKQILLGLKNSND 61

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KLK72.5e-0454.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G175950 PE=4 SV=1[more]
A0A0A0KRX75.6e-0456.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G587100 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KGN50473.15.2e-0454.39hypothetical protein Csa_000457 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016805.1PI0016805.1mRNA