PI0016741 (gene) Melon (PI 482460) v1

Overview
NamePI0016741
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr12: 1544953 .. 1545190 (+)
RNA-Seq ExpressionPI0016741
SyntenyPI0016741
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAGGAGGAGGAGAAATTTAAGCAAGGTTAAGCCTATGAACCCTCAACGGCGAGGCGGGATCTGGAAAAGCTCCTGGATCTTCGGTTGTTTAGTCTTCCTCTTTGCTGCATTCCACGGCTGCAGCAAAATGTTGAAGGAACTGACAGCGCTTCTCCCTCTTTGTTGACGTCGAAAATTTTGTTTCGAGCGATTTTCCCGACTGTGGAGGACCTCTTTATATAGAGGCCCCTTAG

mRNA sequence

ATGAGGAGGAGGAGGAGAAATTTAAGCAAGGTTAAGCCTATGAACCCTCAACGGCGAGGCGGGATCTGGAAAAGCTCCTGGATCTTCGGTTGTTTAGTCTTCCTCTTTGCTCGCTTCTCCCTCTTTGTTGACGTCGAAAATTTTGTTTCGAGCGATTTTCCCGACTGTGGAGGACCTCTTTATATAGAGGCCCCTTAG

Coding sequence (CDS)

ATGAGGAGGAGGAGGAGAAATTTAAGCAAGGTTAAGCCTATGAACCCTCAACGGCGAGGCGGGATCTGGAAAAGCTCCTGGATCTTCGGTTGTTTAGTCTTCCTCTTTGCTCGCTTCTCCCTCTTTGTTGACGTCGAAAATTTTGTTTCGAGCGATTTTCCCGACTGTGGAGGACCTCTTTATATAGAGGCCCCTTAG

Protein sequence

MRRRRRNLSKVKPMNPQRRGGIWKSSWIFGCLVFLFARFSLFVDVENFVSSDFPDCGGPLYIEAP
Homology
[Close]
BLAST of PI0016741 vs. ExPASy TrEMBL
Match: A0A0A0LT39 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042810 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 9.5e-24
Identity = 60/78 (76.92%), Postives = 62/78 (79.49%), Query Frame = 0 

Query: 1  MRRRRRNLSKVKPMNPQRRGGIWKSSWIFGCLVFLFAR--------------FSLFVDVE 60
          M+RRRRNLSKVKPMNPQRRGGIWKSSWIFGCLVFLFA               FSLFVDVE
Sbjct: 1  MKRRRRNLSKVKPMNPQRRGGIWKSSWIFGCLVFLFAAFHGCSKTLKELTALFSLFVDVE 60

Query: 61 NFVSSDFPDCGGPLYIEA 65
          NFV+SDFPD GGPLYIEA
Sbjct: 61 NFVASDFPDFGGPLYIEA 78

[Close]
BLAST of PI0016741 vs. NCBI nr
Match: KGN64174.1 (hypothetical protein Csa_013321 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 2.0e-23
Identity = 60/78 (76.92%), Postives = 62/78 (79.49%), Query Frame = 0 

Query: 1  MRRRRRNLSKVKPMNPQRRGGIWKSSWIFGCLVFLFAR--------------FSLFVDVE 60
          M+RRRRNLSKVKPMNPQRRGGIWKSSWIFGCLVFLFA               FSLFVDVE
Sbjct: 1  MKRRRRNLSKVKPMNPQRRGGIWKSSWIFGCLVFLFAAFHGCSKTLKELTALFSLFVDVE 60

Query: 61 NFVSSDFPDCGGPLYIEA 65
          NFV+SDFPD GGPLYIEA
Sbjct: 61 NFVASDFPDFGGPLYIEA 78

The following BLAST results are available for this feature:
BLAST of PI0016741 vs.
Match NameE-valueIdentityDescription
BLAST of PI0016741 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LT399.5e-2476.92Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042810 PE=4 SV=1[more]
BLAST of PI0016741 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN64174.12.0e-2376.92hypothetical protein Csa_013321 [Cucumis sativus][more]
BLAST of PI0016741 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016741.1PI0016741.1mRNA