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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. CCACAAGATCTCTAAGGCATAAAGAGTGAACATATCACACATTCATTTAGGCTATGGCCGATTTTCGATACGGTTTCTTCGTTCGTCCAGACAACAAGAAGATCGAATCAAATCCTGAAGAAAAGAGCGGAGCAGGCCATATCTCTGACCCCAAATCCAAGCCACCTCATCTCGATGCCGGAGGAAGGCAACGACCTACTGACCTTCTTTCCCGAACGAGGTATGTTAAGCCGAACGAGAAATATACTGAAGAAGTTCATACTAAGAAGTACAAACCAGCGAAGAATTCTGATGAGAAATGTTTTCGTATAAACAAGATAGATTTCAATGAACTCTTAGCCAGAGCTGAAAATGAAGGAAGGCTGCCAGAGCATGAAATGAGTTCATTACGTCGGAAGGCACTAGGGTATTTGAAACCAGCTGCGAATCTTAACTGTAGCAAAAATAAAGCTTGTTCTGCATCAGATCATCATAAAGATCGTTGCACAACAACTATTGACAGCGAAGAAGCAGCACGGCGATACAGGAAGTTCGGGGCACCGGTTCCGGTGTCGAGTGCGAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAAAGGTGCAGCAGTGTGAAACTAAGTAAAAGAGGTTGTATTTTGTCTGATAATGTTGTGATGATATACTAAGTTTGCAAAATATAGGTACTGTGTCAAGTCAAAGGTGATTTCTTGCTTTTGTGTTTATGTAAGTGAAAGGTGTATGTACTCTTTGTAATTTACACCCTTTTATATAATAAAGGAAATTAAAAGTTACCATAGCCAACAAAATTGGAGATGGAAGTTGAGGATTAAGAAGGTATTGAAGAAAAGAAAAATAAGAGGAAAAATAGATACGTGTTAGGTTATTGATAGAAGCACCGAGAAAGAGGAAGCAAAAGAGATAGGTGATGAGATGTAAATAAATGGTTTTCATTAGGTGATGAGATGTAAATAAATGGTTTTCAT mRNA sequence CCACAAGATCTCTAAGGCATAAAGAGTGAACATATCACACATTCATTTAGGCTATGGCCGATTTTCGATACGGTTTCTTCGTTCGTCCAGACAACAAGAAGATCGAATCAAATCCTGAAGAAAAGAGCGGAGCAGGCCATATCTCTGACCCCAAATCCAAGCCACCTCATCTCGATGCCGGAGGAAGGCAACGACCTACTGACCTTCTTTCCCGAACGAGGTATGTTAAGCCGAACGAGAAATATACTGAAGAAGTTCATACTAAGAAGTACAAACCAGCGAAGAATTCTGATGAGAAATGTTTTCGTATAAACAAGATAGATTTCAATGAACTCTTAGCCAGAGCTGAAAATGAAGGAAGGCTGCCAGAGCATGAAATGAGTTCATTACGTCGGAAGGCACTAGGGTATTTGAAACCAGCTGCGAATCTTAACTGTAGCAAAAATAAAGCTTGTTCTGCATCAGATCATCATAAAGATCGTTGCACAACAACTATTGACAGCGAAGAAGCAGCACGGCGATACAGGAAGTTCGGGGCACCGGTTCCGGTGTCGAGTGCGAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAAAGGTGCAGCAGTGTGAAACTAAGTAAAAGAGGTTGTATTTTGTCTGATAATGTTGTGATGATATACTAAGTTTGCAAAATATAGGTACTGTGTCAAGTCAAAGGTGATTTCTTGCTTTTGTGTTTATGTAAGTGAAAGGTGTATGTACTCTTTGTAATTTACACCCTTTTATATAATAAAGGAAATTAAAAGTTACCATAGCCAACAAAATTGGAGATGGAAGTTGAGGATTAAGAAGGTATTGAAGAAAAGAAAAATAAGAGGAAAAATAGATACGTGTTAGGTTATTGATAGAAGCACCGAGAAAGAGGAAGCAAAAGAGATAGGTGATGAGATGTAAATAAATGGTTTTCATTAGGTGATGAGATGTAAATAAATGGTTTTCAT Coding sequence (CDS) ATGGCCGATTTTCGATACGGTTTCTTCGTTCGTCCAGACAACAAGAAGATCGAATCAAATCCTGAAGAAAAGAGCGGAGCAGGCCATATCTCTGACCCCAAATCCAAGCCACCTCATCTCGATGCCGGAGGAAGGCAACGACCTACTGACCTTCTTTCCCGAACGAGGTATGTTAAGCCGAACGAGAAATATACTGAAGAAGTTCATACTAAGAAGTACAAACCAGCGAAGAATTCTGATGAGAAATGTTTTCGTATAAACAAGATAGATTTCAATGAACTCTTAGCCAGAGCTGAAAATGAAGGAAGGCTGCCAGAGCATGAAATGAGTTCATTACGTCGGAAGGCACTAGGGTATTTGAAACCAGCTGCGAATCTTAACTGTAGCAAAAATAAAGCTTGTTCTGCATCAGATCATCATAAAGATCGTTGCACAACAACTATTGACAGCGAAGAAGCAGCACGGCGATACAGGAAGTTCGGGGCACCGGTTCCGGTGTCGAGTGCGAATGTAGCAACCATTGACTGCAAAGAGGCTGCTAGGAAGTATAAAGGTGCAGCAGTGTGA Protein sequence MADFRYGFFVRPDNKKIESNPEEKSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVKPNEKYTEEVHTKKYKPAKNSDEKCFRINKIDFNELLARAENEGRLPEHEMSSLRRKALGYLKPAANLNCSKNKACSASDHHKDRCTTTIDSEEAARRYRKFGAPVPVSSANVATIDCKEAARKYKGAAV
Homology
BLAST of PI0016670 vs. ExPASy TrEMBL
Match: A0A0A0LG87 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1) HSP 1 Score: 253.4 bits (646), Expect = 7.2e-64 Identity = 139/200 (69.50%), Postives = 155/200 (77.50%), Query Frame = 0
Query: 1 MADFRYGFFVRPDNKKIESNPEE-KSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVK 60
MADFRYGFFVRPDNKKIESNP E KS AGHISDPKSKPP+LDAGGRQ+P +L RTRYV
Sbjct: 1 MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
Query: 61 PNEKYTEEVHTKKYKPAKNSDEKCFR----IN-KIDFNELLARAENEGRLPEHEMSSLRR 120
P EKYTEEVHTKKY+P KNSD+ IN +I+FN+LLA + E RLP++EM L
Sbjct: 61 PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120
Query: 121 ------KALGYLKPAANLNCSKNKACSASDHHKDRCTTTIDSEEAARRYRKFGAPVPVSS 180
KA+ LK NL+CSKN AC+AS KD CT TIDS+EAARRY KFGAPVPVS+
Sbjct: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180
Query: 181 ANVATIDCKEAARKYKGAAV 189
ANVATIDCKEAARKY GAAV
Sbjct: 181 ANVATIDCKEAARKYNGAAV 200
BLAST of PI0016670 vs. ExPASy TrEMBL
Match: A0A5A7VCJ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001150 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 9.4e-64 Identity = 138/199 (69.35%), Postives = 155/199 (77.89%), Query Frame = 0
Query: 1 MADFRYGFFVRPDNKKIESNPEEKSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVKP 60
MADFRYGFFVRPDNKKIESNPEEKS AGHIS+PKSKPP+LDAGGRQRPT +L RTRYV P
Sbjct: 1 MADFRYGFFVRPDNKKIESNPEEKSRAGHISNPKSKPPNLDAGGRQRPTAILPRTRYVTP 60
Query: 61 NEKYTEEVHTKKYKPAKNSDEKCFRIN-----KIDFNELLARAENEGRLPEHEMSSLRR- 120
EK+TEEVHTKKY+P KNSD+ N +I+FN+LLA+A+ E RLP++EM L
Sbjct: 61 IEKHTEEVHTKKYEPMKNSDKGTLDSNLAINQRIEFNKLLAKAQEEVRLPKYEMRLLSEP 120
Query: 121 -----KALGYLKPAANLNCSKNKACSASDHHKDRCTTTIDSEEAARRYRKFGAPVPVSSA 180
KA+ LK A NL+CSKN ACSAS HHKD CT TIDS+EAARRY FGA VSSA
Sbjct: 121 MNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEAARRYGTFGALGRVSSA 180
Query: 181 NVATIDCKEAARKYKGAAV 189
N ATI+CKEAARKY GA V
Sbjct: 181 NEATINCKEAARKYNGAEV 199
BLAST of PI0016670 vs. ExPASy TrEMBL
Match: E5GBR2 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.7e-63 Identity = 137/199 (68.84%), Postives = 154/199 (77.39%), Query Frame = 0
Query: 1 MADFRYGFFVRPDNKKIESNPEEKSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVKP 60
MADFRYGFFVRPDNKKIESNPEEKS AGHIS+PKSKPP+LD GGRQRPT +L RTRYV P
Sbjct: 1 MADFRYGFFVRPDNKKIESNPEEKSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVTP 60
Query: 61 NEKYTEEVHTKKYKPAKNSDEKCFRIN-----KIDFNELLARAENEGRLPEHEMSSLRR- 120
EK+TEEVHTKKY+P KNSD+ N +I+FN+LLA+A+ E RLP++EM L
Sbjct: 61 IEKHTEEVHTKKYEPMKNSDKGTLDSNLAINQRIEFNKLLAKAQEEVRLPKYEMRLLSEP 120
Query: 121 -----KALGYLKPAANLNCSKNKACSASDHHKDRCTTTIDSEEAARRYRKFGAPVPVSSA 180
KA+ LK A NL+CSKN ACSAS HHKD CT TIDS+EAARRY FGA VSSA
Sbjct: 121 MNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEAARRYGTFGALGRVSSA 180
Query: 181 NVATIDCKEAARKYKGAAV 189
N ATI+CKEAARKY GA V
Sbjct: 181 NEATINCKEAARKYNGAEV 199
BLAST of PI0016670 vs. NCBI nr
Match: KGN60838.1 (hypothetical protein Csa_019431 [Cucumis sativus]) HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63 Identity = 139/200 (69.50%), Postives = 155/200 (77.50%), Query Frame = 0
Query: 1 MADFRYGFFVRPDNKKIESNPEE-KSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVK 60
MADFRYGFFVRPDNKKIESNP E KS AGHISDPKSKPP+LDAGGRQ+P +L RTRYV
Sbjct: 1 MADFRYGFFVRPDNKKIESNPAELKSKAGHISDPKSKPPYLDAGGRQQPIAILPRTRYVT 60
Query: 61 PNEKYTEEVHTKKYKPAKNSDEKCFR----IN-KIDFNELLARAENEGRLPEHEMSSLRR 120
P EKYTEEVHTKKY+P KNSD+ IN +I+FN+LLA + E RLP++EM L
Sbjct: 61 PIEKYTEEVHTKKYEPVKNSDKGTLNSHLAINQRIEFNKLLANVQKEARLPKYEMRLLSE 120
Query: 121 ------KALGYLKPAANLNCSKNKACSASDHHKDRCTTTIDSEEAARRYRKFGAPVPVSS 180
KA+ LK NL+CSKN AC+AS KD CT TIDS+EAARRY KFGAPVPVS+
Sbjct: 121 PMTDIGKAIECLKEVVNLDCSKNNACAASARRKDSCTKTIDSKEAARRYGKFGAPVPVSN 180
Query: 181 ANVATIDCKEAARKYKGAAV 189
ANVATIDCKEAARKY GAAV
Sbjct: 181 ANVATIDCKEAARKYNGAAV 200
BLAST of PI0016670 vs. NCBI nr
Match: KAA0063635.1 (hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK18391.1 hypothetical protein E5676_scaffold456G001150 [Cucumis melo var. makuwa]) HSP 1 Score: 253.1 bits (645), Expect = 1.9e-63 Identity = 138/199 (69.35%), Postives = 155/199 (77.89%), Query Frame = 0
Query: 1 MADFRYGFFVRPDNKKIESNPEEKSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVKP 60
MADFRYGFFVRPDNKKIESNPEEKS AGHIS+PKSKPP+LDAGGRQRPT +L RTRYV P
Sbjct: 1 MADFRYGFFVRPDNKKIESNPEEKSRAGHISNPKSKPPNLDAGGRQRPTAILPRTRYVTP 60
Query: 61 NEKYTEEVHTKKYKPAKNSDEKCFRIN-----KIDFNELLARAENEGRLPEHEMSSLRR- 120
EK+TEEVHTKKY+P KNSD+ N +I+FN+LLA+A+ E RLP++EM L
Sbjct: 61 IEKHTEEVHTKKYEPMKNSDKGTLDSNLAINQRIEFNKLLAKAQEEVRLPKYEMRLLSEP 120
Query: 121 -----KALGYLKPAANLNCSKNKACSASDHHKDRCTTTIDSEEAARRYRKFGAPVPVSSA 180
KA+ LK A NL+CSKN ACSAS HHKD CT TIDS+EAARRY FGA VSSA
Sbjct: 121 MNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEAARRYGTFGALGRVSSA 180
Query: 181 NVATIDCKEAARKYKGAAV 189
N ATI+CKEAARKY GA V
Sbjct: 181 NEATINCKEAARKYNGAEV 199
BLAST of PI0016670 vs. NCBI nr
Match: ADN33904.1 (hypothetical protein [Cucumis melo subsp. melo]) HSP 1 Score: 251.5 bits (641), Expect = 5.6e-63 Identity = 137/199 (68.84%), Postives = 154/199 (77.39%), Query Frame = 0
Query: 1 MADFRYGFFVRPDNKKIESNPEEKSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVKP 60
MADFRYGFFVRPDNKKIESNPEEKS AGHIS+PKSKPP+LD GGRQRPT +L RTRYV P
Sbjct: 1 MADFRYGFFVRPDNKKIESNPEEKSRAGHISNPKSKPPNLDVGGRQRPTAILPRTRYVTP 60
Query: 61 NEKYTEEVHTKKYKPAKNSDEKCFRIN-----KIDFNELLARAENEGRLPEHEMSSLRR- 120
EK+TEEVHTKKY+P KNSD+ N +I+FN+LLA+A+ E RLP++EM L
Sbjct: 61 IEKHTEEVHTKKYEPMKNSDKGTLDSNLAINQRIEFNKLLAKAQEEVRLPKYEMRLLSEP 120
Query: 121 -----KALGYLKPAANLNCSKNKACSASDHHKDRCTTTIDSEEAARRYRKFGAPVPVSSA 180
KA+ LK A NL+CSKN ACSAS HHKD CT TIDS+EAARRY FGA VSSA
Sbjct: 121 MNDIGKAIECLKEAVNLDCSKNNACSASYHHKDSCTKTIDSKEAARRYGTFGALGRVSSA 180
Query: 181 NVATIDCKEAARKYKGAAV 189
N ATI+CKEAARKY GA V
Sbjct: 181 NEATINCKEAARKYNGAEV 199
BLAST of PI0016670 vs. NCBI nr
Match: KAG6599284.1 (putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 164.9 bits (416), Expect = 6.9e-37 Identity = 105/213 (49.30%), Postives = 124/213 (58.22%), Query Frame = 0
Query: 1 MADFRYGFFVRPDNKKIESNPEEKSGAGHISDPKSKPPHLDAGGRQRPTDLLSRTRYVKP 60
MADFRYGFF RPDNK +E EEK+ HI DPK KP H+DAGGR+ PT +L R RYV
Sbjct: 1 MADFRYGFFCRPDNKNLEPQQEEKNTTSHIPDPKYKPAHVDAGGRRLPTVVLPRPRYVTT 60
Query: 61 NEKYTEEV-----------HTKKYKPAKN---SDEKCFR------INK-IDFNELLARAE 120
E YTEE HTK +P K+ +K R +N+ +FN LL + E
Sbjct: 61 TETYTEEFYSNSRDGFQYSHTKNSEPVKSYGLHHDKGIRHPSRPALNRPTEFNRLLVKVE 120
Query: 121 NEGRLPEHEMSSLR-----RKALGYLKPAANLNCSKNKACSASDH-HKDRCTTTIDSEEA 180
E +HEM + KA+ + K A NL KN AC A DH KD T TIDS EA
Sbjct: 121 MEEDQVKHEMRISKPMNDIEKAIEFFKEAVNLPYCKNNACHAPDHPKKDGYTKTIDSNEA 180
Query: 181 ARRYRKFGAPVPVSSANVATIDCKEAARKYKGA 187
ARR+ FG P PV SAN ATI+CKEAARKYK +
Sbjct: 181 ARRFGNFGVPPPVPSANGATINCKEAARKYKAS 213
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0LG87 | 7.2e-64 | 69.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G012700 PE=4 SV=1 | [more] |
| A0A5A7VCJ6 | 9.4e-64 | 69.35 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
| E5GBR2 | 2.7e-63 | 68.84 | Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN60838.1 | 1.5e-63 | 69.50 | hypothetical protein Csa_019431 [Cucumis sativus] | [more] |
| KAA0063635.1 | 1.9e-63 | 69.35 | hypothetical protein E6C27_scaffold329G001480 [Cucumis melo var. makuwa] >TYK183... | [more] |
| ADN33904.1 | 5.6e-63 | 68.84 | hypothetical protein [Cucumis melo subsp. melo] | [more] |
| KAG6599284.1 | 6.9e-37 | 49.30 | putative nucleolar protein 5-2, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 13..69 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 13..43 |
Relationships
The following mRNA feature(s) are a part of this gene:
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