PI0016664 (gene) Melon (PI 482460) v1

Overview
NamePI0016664
Typegene
OrganismCucumis metuliferus (Melon (PI 482460) v1)
DescriptionUnknown protein
Locationchr06: 3009729 .. 3010070 (+)
RNA-Seq ExpressionPI0016664
SyntenyPI0016664
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATAGTCCCAATTTTGGTGAAAAGGGTTTCACAAACATAGAGGACATTGGTAATTGCGACGCGTGGTGGCGCGTCGTGAGAGGACCCTCGAAAATCTTGGAGCAGAGAGAACGACAAAAATGGAGTCCTCAAAACCTTCCAGGTGCCACTCTAACAAACATGGCTTCACCCTTAAACCTCTGGCGCTCCACTCTTCTCCTTCTTCTTTCTTCGTTTCCTTCCAATATTAAACACCATGAATTTCTTCATTTCTCCATTACCCTTCTCCACACTCTTCTAGACCCCTCCCCTTCTCTCTCTCCCTCTCAGAAACCCCTTTTAACAACTGATCATCATTAA

mRNA sequence

ATGGATAGTCCCAATTTTGGTGAAAAGGGTTTCACAAACATAGAGGACATTGGTAATTGCGACGCGTGGTGGCGCGTCGTGAGAGGACCCTCGAAAATCTTGGAGCAGAGAGAACGACAAAAATGGAGTCCTCAAAACCTTCCAGGTGCCACTCTAACAAACATGGCTTCACCCTTAAACCTCTGGCGCTCCACTCTTCTCCTTCTTCTTTCTTCGTTTCCTTCCAATATTAAACACCATGAATTTCTTCATTTCTCCATTACCCTTCTCCACACTCTTCTAGACCCCTCCCCTTCTCTCTCTCCCTCTCAGAAACCCCTTTTAACAACTGATCATCATTAA

Coding sequence (CDS)

ATGGATAGTCCCAATTTTGGTGAAAAGGGTTTCACAAACATAGAGGACATTGGTAATTGCGACGCGTGGTGGCGCGTCGTGAGAGGACCCTCGAAAATCTTGGAGCAGAGAGAACGACAAAAATGGAGTCCTCAAAACCTTCCAGGTGCCACTCTAACAAACATGGCTTCACCCTTAAACCTCTGGCGCTCCACTCTTCTCCTTCTTCTTTCTTCGTTTCCTTCCAATATTAAACACCATGAATTTCTTCATTTCTCCATTACCCTTCTCCACACTCTTCTAGACCCCTCCCCTTCTCTCTCTCCCTCTCAGAAACCCCTTTTAACAACTGATCATCATTAA

Protein sequence

MDSPNFGEKGFTNIEDIGNCDAWWRVVRGPSKILEQRERQKWSPQNLPGATLTNMASPLNLWRSTLLLLLSSFPSNIKHHEFLHFSITLLHTLLDPSPSLSPSQKPLLTTDHH
Homology
[Close]
BLAST of PI0016664 vs. ExPASy TrEMBL
Match: A0A0A0L4V9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133980 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.2e-29
Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0 

Query: 1  MDSPNFGEKG--FTNIEDIGNCDAWWRVVRGPSKILEQRERQKWSPQNLPGATLTNMASP 60
          MDSPN GE    FTNIEDIGNCDAWWRV  GPSKILEQRERQKWSPQ+LPGATLT+MAS 
Sbjct: 1  MDSPNLGENVTLFTNIEDIGNCDAWWRVESGPSKILEQRERQKWSPQDLPGATLTDMASS 60

Query: 61 LNLWRSTLLLLLSSFPSNIKHHEFLHFSITLL 91
          LNLWRSTLLLL SS PSNIK +  +HF I+ L
Sbjct: 61 LNLWRSTLLLLPSSLPSNIKLNT-MHFFISPL 91

[Close]
BLAST of PI0016664 vs. NCBI nr
Match: KGN56798.1 (hypothetical protein Csa_010620 [Cucumis sativus])

HSP 1 Score: 139.0 bits (349), Expect = 2.4e-29
Identity = 72/92 (78.26%), Postives = 77/92 (83.70%), Query Frame = 0 

Query: 1  MDSPNFGEKG--FTNIEDIGNCDAWWRVVRGPSKILEQRERQKWSPQNLPGATLTNMASP 60
          MDSPN GE    FTNIEDIGNCDAWWRV  GPSKILEQRERQKWSPQ+LPGATLT+MAS 
Sbjct: 1  MDSPNLGENVTLFTNIEDIGNCDAWWRVESGPSKILEQRERQKWSPQDLPGATLTDMASS 60

Query: 61 LNLWRSTLLLLLSSFPSNIKHHEFLHFSITLL 91
          LNLWRSTLLLL SS PSNIK +  +HF I+ L
Sbjct: 61 LNLWRSTLLLLPSSLPSNIKLNT-MHFFISPL 91

The following BLAST results are available for this feature:
BLAST of PI0016664 vs.
Match NameE-valueIdentityDescription
BLAST of PI0016664 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4V91.2e-2978.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G133980 PE=4 SV=1[more]
BLAST of PI0016664 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN56798.12.4e-2978.26hypothetical protein Csa_010620 [Cucumis sativus][more]
BLAST of PI0016664 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
PI0016664.1PI0016664.1mRNA