PI0016598 (gene) Melon (PI 482460) v1

Overview


Name	PI0016598
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	Protein TIC 214
Location	tig00003741: 90009 .. 90494 (+)
RNA-Seq Expression	PI0016598
Synteny	PI0016598

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCAAACCATAGGTATTTCATTAGTTCATAAGAATAAGTACGAAATTAATCAAAGATATCAAGAAAAGGGCTATCCTTATAAGAAGAGTTTTGCTGAATCCATTGCAATACATCAAAAAACGACTGAAAATAGAACCAGCAATCATTATGATTTGCTTGTTCCGGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATCAAAATGATATCCATAGCTATACAGCATTTTACAATGGAAATAAGGTGAAAACTGATGATCCAGTTTTAGATCAAAGAAGCAAACATCTTGATAGATATCAAAAGAAACTAAATAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGAAAATTCGTTAA

mRNA sequence

ATGTCTCAAACCATAGGTATTTCATTAGTTCATAAGAATAAGTACGAAATTAATCAAAGATATCAAGAAAAGGGCTATCCTTATAAGAAGAGTTTTGCTGAATCCATTGCAATACATCAAAAAACGACTGAAAATAGAACCAGCAATCATTATGATTTGCTTGTTCCGGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATCAAAATGATATCCATAGCTATACAGCATTTTACAATGGAAATAAGGTGAAAACTGATGATCCAGTTTTAGATCAAAGAAGCAAACATCTTGATAGATATCAAAAGAAACTAAATAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGAAAATTCGTTAA

Coding sequence (CDS)

ATGTCTCAAACCATAGGTATTTCATTAGTTCATAAGAATAAGTACGAAATTAATCAAAGATATCAAGAAAAGGGCTATCCTTATAAGAAGAGTTTTGCTGAATCCATTGCAATACATCAAAAAACGACTGAAAATAGAACCAGCAATCATTATGATTTGCTTGTTCCGGAAAATATCTTATCCCCTAGAGGTCGTAGAGAGTTTAGAATTCTAATTTGTTTCAATTCTGGGAATCAAAATGATATCCATAGCTATACAGCATTTTACAATGGAAATAAGGTGAAAACTGATGATCCAGTTTTAGATCAAAGAAGCAAACATCTTGATAGATATCAAAAGAAACTAAATAAATTAAAGTTCTTTCTTTGGCCCAATTATCGATTAGAAGATTTAGCTTGTATGAATCGTTATTGGTTTGATACCAATAATAGCAGTCGTTTTAGTATGCTAAGGATCCATATGTATCCACAATTGAAAATTCGTTAA

Protein sequence

MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENILSPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKFFLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR

Homology

[Close]

BLAST of PI0016598 vs. ExPASy Swiss-Prot
Match: Q4VZL0 (Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2)

HSP 1 Score: 300.8 bits (769), Expect = 9.1e-81
Identity = 144/161 (89.44%), Postives = 151/161 (93.79%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLV KNKY++NQRYQEKGYPYK+SFAESIAIHQK TENRTSNHYDLLVPENIL
Sbjct: 1719 MSQTIGISLVQKNKYQLNQRYQEKGYPYKRSFAESIAIHQKRTENRTSNHYDLLVPENIL 1778

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNSGN+NDIH  TAF +GNKVKTDD VLD+RSKHLDRYQ +L  LK 
Sbjct: 1779 SPRGRREFRILICFNSGNKNDIHRNTAFDDGNKVKTDDQVLDKRSKHLDRYQNQLKNLKL 1838

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1839 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1879

[Close]

BLAST of PI0016598 vs. ExPASy Swiss-Prot
Match: Q09WW0 (Protein TIC 214 OS=Morus indica OX=248361 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.8e-52
Identity = 107/159 (67.30%), Postives = 120/159 (75.47%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            M QTIGISLVHK+K+ INQRY+EKG    K+F E I+ HQK TENR  NHYDL VPE IL
Sbjct: 1703 MYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETIL 1762

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPR RRE RILICFNS N+N I S   F N NKVK+  PVL++   +    Q  + +LKF
Sbjct: 1763 SPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKS--PVLNKSKIN----QNNIIRLKF 1822

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLK 160
            FLWPNYRLED ACMNRYWFDTNN SRFSM+RIHMYPQ K
Sbjct: 1823 FLWPNYRLEDFACMNRYWFDTNNGSRFSMVRIHMYPQFK 1855

[Close]

BLAST of PI0016598 vs. ExPASy Swiss-Prot
Match: A0ZZ93 (Protein TIC 214 OS=Gossypium barbadense OX=3634 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-52
Identity = 107/159 (67.30%), Postives = 119/159 (74.84%), Query Frame = 0


Query: 3    QTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENILSP 62
            QTI I LVHKNK++INQRYQEK Y  K  F E IA HQK TEN+  NHYDL VPENILSP
Sbjct: 1734 QTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSP 1793

Query: 63   RGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKFFL 122
              RRE RI I FNS ++N +H    F   N VK    VL  ++KHLD  +KKL KLKFFL
Sbjct: 1794 NHRRELRIRISFNSRDKNGMHRNAVFL--NNVKNCGQVL-TKNKHLDSDKKKLIKLKFFL 1853

Query: 123  WPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            WPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+LKIR
Sbjct: 1854 WPNYRLEDLACMNRYWFNTNNGSRFSMIRIRMYPRLKIR 1889

[Close]

BLAST of PI0016598 vs. ExPASy Swiss-Prot
Match: Q2L951 (Protein TIC 214 OS=Gossypium hirsutum OX=3635 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.2e-52
Identity = 107/159 (67.30%), Postives = 119/159 (74.84%), Query Frame = 0


Query: 3    QTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENILSP 62
            QTI I LVHKNK++INQRYQEK Y  K  F E IA HQK TEN+  NHYDL VPENILSP
Sbjct: 1737 QTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSP 1796

Query: 63   RGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKFFL 122
              RRE RI I FNS ++N +H    F   N VK    VL  ++KHLD  +KKL KLKFFL
Sbjct: 1797 NHRRELRIRISFNSRDKNGMHRNAVFL--NNVKNCGQVL-TKNKHLDSDKKKLIKLKFFL 1856

Query: 123  WPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            WPNYRLEDLACMNRYWF+TNN SRFSM+RI MYP+LKIR
Sbjct: 1857 WPNYRLEDLACMNRYWFNTNNGSRFSMIRIRMYPRLKIR 1892

[Close]

BLAST of PI0016598 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 9.8e-51
Identity = 105/161 (65.22%), Postives = 118/161 (73.29%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            M QTI ISLVHKNK + N R +EK Y  K  F ESIA H+K       NHY+LLVPENI 
Sbjct: 1700 MYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIARHEKMVGTGDENHYELLVPENIS 1759

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPR RRE RI ICFNSGN+N +     F+N NKVK     LD+ +KHLD  +KKL KLK 
Sbjct: 1760 SPRRRRELRIRICFNSGNKNFVDRNPVFFNENKVKHCGRFLDE-NKHLDTDKKKLIKLKC 1819

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNY+LEDLACMNRYWF+TNN SRFSM RIHMYP+LKIR
Sbjct: 1820 FLWPNYQLEDLACMNRYWFNTNNGSRFSMSRIHMYPRLKIR 1859

[Close]

BLAST of PI0016598 vs. ExPASy TrEMBL
Match: A0A2I6C0D0 (Protein TIC 214 OS=Lagenaria siceraria OX=3668 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEK YPYKKSFAESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1304 MSQTIGISLVHKNKYQINQRYQEKDYPYKKSFAESIAIHQKTNENRTSNHYDLLVPENIL 1363

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNSGN+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1364 SPRGRREFRILICFNSGNRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1423

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1424 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1464

[Close]

BLAST of PI0016598 vs. ExPASy TrEMBL
Match: A0A7G9IT96 (Protein TIC 214 OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEK YPYKKSFAESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1688 MSQTIGISLVHKNKYQINQRYQEKDYPYKKSFAESIAIHQKTNENRTSNHYDLLVPENIL 1747

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNSGN+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1748 SPRGRREFRILICFNSGNRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1807

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1808 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1848

[Close]

BLAST of PI0016598 vs. ExPASy TrEMBL
Match: A0A2Z2CQP0 (Protein TIC 214 OS=Coccinia grandis OX=387127 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 151/161 (93.79%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEKGYPYKKSF ESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1693 MSQTIGISLVHKNKYQINQRYQEKGYPYKKSFVESIAIHQKTNENRTSNHYDLLVPENIL 1752

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNS N+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1753 SPRGRREFRILICFNSENRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1812

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1813 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1853

[Close]

BLAST of PI0016598 vs. ExPASy TrEMBL
Match: A0A2Z2CFW2 (Protein TIC 214 OS=Coccinia grandis OX=387127 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 151/161 (93.79%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEKGYPYKKSF ESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1690 MSQTIGISLVHKNKYQINQRYQEKGYPYKKSFVESIAIHQKTNENRTSNHYDLLVPENIL 1749

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNS N+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1750 SPRGRREFRILICFNSENRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1809

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1810 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1850

[Close]

BLAST of PI0016598 vs. ExPASy TrEMBL
Match: A0A6B9M056 (Protein TIC 214 OS=Cucumis melo subsp. melo OX=412675 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.3e-82
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEKGYPYK+SFAESIAIHQKTTENRTSNH DLLVPENIL
Sbjct: 1711 MSQTIGISLVHKNKYQINQRYQEKGYPYKRSFAESIAIHQKTTENRTSNHSDLLVPENIL 1770

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNSGN+NDIH  TAFYNGNKVK DD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1771 SPRGRREFRILICFNSGNKNDIHRNTAFYNGNKVKADDQVLDKRSKHLDRYQNKLNKLKF 1830

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1831 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1871

[Close]

BLAST of PI0016598 vs. NCBI nr
Match: YP_009456205.1 (Ycf1 [Lagenaria siceraria] >AUJ21970.1 Ycf1 [Lagenaria siceraria])

HSP 1 Score: 317.4 bits (812), Expect = 7.2e-83
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEK YPYKKSFAESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1304 MSQTIGISLVHKNKYQINQRYQEKDYPYKKSFAESIAIHQKTNENRTSNHYDLLVPENIL 1363

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNSGN+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1364 SPRGRREFRILICFNSGNRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1423

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1424 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1464

[Close]

BLAST of PI0016598 vs. NCBI nr
Match: QNM38590.1 (hypothetical chloroplast RF19 [Lagenaria siceraria var. microcarpa])

HSP 1 Score: 317.4 bits (812), Expect = 7.2e-83
Identity = 152/161 (94.41%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEK YPYKKSFAESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1688 MSQTIGISLVHKNKYQINQRYQEKDYPYKKSFAESIAIHQKTNENRTSNHYDLLVPENIL 1747

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNSGN+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1748 SPRGRREFRILICFNSGNRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1807

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1808 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1848

[Close]

BLAST of PI0016598 vs. NCBI nr
Match: QHB76023.1 (Ycf1 [Cucumis melo subsp. melo])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 151/161 (93.79%), Postives = 155/161 (96.27%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEKGYPYK+SFAESIAIHQKTTENRTSNH DLLVPENIL
Sbjct: 1711 MSQTIGISLVHKNKYQINQRYQEKGYPYKRSFAESIAIHQKTTENRTSNHSDLLVPENIL 1770

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNSGN+NDIH  TAFYNGNKVK DD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1771 SPRGRREFRILICFNSGNKNDIHRNTAFYNGNKVKADDQVLDKRSKHLDRYQNKLNKLKF 1830

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1831 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1871

[Close]

BLAST of PI0016598 vs. NCBI nr
Match: AOX48798.1 (hypothetical protein [Coccinia grandis])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 151/161 (93.79%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEKGYPYKKSF ESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1693 MSQTIGISLVHKNKYQINQRYQEKGYPYKKSFVESIAIHQKTNENRTSNHYDLLVPENIL 1752

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNS N+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1753 SPRGRREFRILICFNSENRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1812

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1813 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1853

[Close]

BLAST of PI0016598 vs. NCBI nr
Match: YP_009317444.1 (hypothetical protein [Coccinia grandis] >AOX48713.1 hypothetical protein [Coccinia grandis])

HSP 1 Score: 315.5 bits (807), Expect = 2.7e-82
Identity = 151/161 (93.79%), Postives = 154/161 (95.65%), Query Frame = 0


Query: 1    MSQTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENIL 60
            MSQTIGISLVHKNKY+INQRYQEKGYPYKKSF ESIAIHQKT ENRTSNHYDLLVPENIL
Sbjct: 1690 MSQTIGISLVHKNKYQINQRYQEKGYPYKKSFVESIAIHQKTNENRTSNHYDLLVPENIL 1749

Query: 61   SPRGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKF 120
            SPRGRREFRILICFNS N+NDIH  TAFYNGNKVKTDD VLD+RSKHLDRYQ KLNKLKF
Sbjct: 1750 SPRGRREFRILICFNSENRNDIHRNTAFYNGNKVKTDDQVLDKRSKHLDRYQNKLNKLKF 1809

Query: 121  FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 162
            FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR
Sbjct: 1810 FLWPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKIR 1850

[Close]

BLAST of PI0016598 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 156.4 bits (394), Expect = 2.0e-38
Identity = 80/158 (50.63%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 3    QTIGISLVHKNKYEINQRYQEKGYPYKKSFAESIAIHQKTTENRTSNHYDLLVPENILSP 62
            +TIGISLVHKNK++I++RY++K Y  KK F +SI  +Q  T N+  N+YD  VPE ILSP
Sbjct: 1629 RTIGISLVHKNKHKISKRYKKKSYINKKFFEKSITKYQNKTVNKKKNNYDFFVPEKILSP 1688

Query: 63   RGRREFRILICFNSGNQNDIHSYTAFYNGNKVKTDDPVLDQRSKHLDRYQKKLNKLKFFL 122
            + RREFRILICFN   +N   + + F + N       +  ++   LD+ +  L  LK FL
Sbjct: 1689 KRRREFRILICFNLKKKNARDTNSRF-DKNIQNLTTVLHKKKDLDLDKDKNNLINLKSFL 1748

Query: 123  WPNYRLEDLACMNRYWFDTNNSSRFSMLRIHMYPQLKI 161
            WPN++LEDLACMNRYWF+T N + FSM+RI MY +  I
Sbjct: 1749 WPNFKLEDLACMNRYWFNTTNGNHFSMIRIRMYTRFPI 1785

The following BLAST results are available for this feature:

BLAST of PI0016598 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZL0	9.1e-81	89.44	Protein TIC 214 OS=Cucumis sativus OX=3659 GN=TIC214 PE=3 SV=2	[more]
Q09WW0	1.8e-52	67.30	Protein TIC 214 OS=Morus indica OX=248361 GN=TIC214 PE=3 SV=1	[more]
A0ZZ93	5.2e-52	67.30	Protein TIC 214 OS=Gossypium barbadense OX=3634 GN=TIC214 PE=3 SV=1	[more]
Q2L951	5.2e-52	67.30	Protein TIC 214 OS=Gossypium hirsutum OX=3635 GN=TIC214 PE=3 SV=1	[more]
A6MM95	9.8e-51	65.22	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]

BLAST of PI0016598 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2I6C0D0	3.5e-83	94.41	Protein TIC 214 OS=Lagenaria siceraria OX=3668 GN=ycf1 PE=3 SV=1	[more]
A0A7G9IT96	3.5e-83	94.41	Protein TIC 214 OS=Lagenaria siceraria var. microcarpa OX=2726058 GN=ycf1 PE=3 S...	[more]
A0A2Z2CQP0	1.3e-82	93.79	Protein TIC 214 OS=Coccinia grandis OX=387127 GN=ycf1 PE=3 SV=1	[more]
A0A2Z2CFW2	1.3e-82	93.79	Protein TIC 214 OS=Coccinia grandis OX=387127 GN=ycf1 PE=3 SV=1	[more]
A0A6B9M056	1.3e-82	93.79	Protein TIC 214 OS=Cucumis melo subsp. melo OX=412675 GN=ycf1 PE=3 SV=1	[more]

BLAST of PI0016598 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009456205.1	7.2e-83	94.41	Ycf1 [Lagenaria siceraria] >AUJ21970.1 Ycf1 [Lagenaria siceraria]	[more]
QNM38590.1	7.2e-83	94.41	hypothetical chloroplast RF19 [Lagenaria siceraria var. microcarpa]	[more]
QHB76023.1	2.7e-82	93.79	Ycf1 [Cucumis melo subsp. melo]	[more]
AOX48798.1	2.7e-82	93.79	hypothetical protein [Coccinia grandis]	[more]
YP_009317444.1	2.7e-82	93.79	hypothetical protein [Coccinia grandis] >AOX48713.1 hypothetical protein [Coccin...	[more]

BLAST of PI0016598 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	2.0e-38	50.63	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 1..155
None	No IPR available	PANTHER	PTHR33163:SF27	PROTEIN TIC 214	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016598.1	PI0016598.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane