PI0016554 (gene) Melon (PI 482460) v1

Overview


Name	PI0016554
Type	gene
Organism	Cucumis metuliferus (Melon (PI 482460) v1)
Description	protein RALF-like 33
Location	chr11: 4222258 .. 4223013 (-)
RNA-Seq Expression	PI0016554
Synteny	PI0016554

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACGGGACTTTTGTATTGATCCTCCAAAAATGGGAATCTCACGCGTTTCTTCTCTCTTTGCCGCCTTTGCCATTCTCGCTGCTCATTTTCTCATCTCCATGGCGGCGGCCGTTGATTTATCTGGCGACCACAAGCTTCTCTTTGTTCCGACCACATCCGATTTCTTCAACGACAACGATTTCGGTTTCGGAATGGAGTTCCAGATGGACTCTGAGATCAATCGCCGAATTCTAGCGACTACTCGTTACATAAGCTACGGTGCTCTTAGGAGGAACAATGTTCCTTGCTCTCGACGTGGTGCTTCTTATTACAACTGCAGACCAGGCGCTCAGGCGAATCCTTACTCCCGTGGTTGCAACGCTATTACTCGCTGCCGAAGTTGATTTCGTATCACTTGATTCATTTTTGGAAGTTAGATTCGTCGTCGTACTCTATCGGTTAGTTCTTCGTGTGTTTATACTGAATATACATGTCGATCGAGTAATAAAATTCACATATATACTGATGATTGAAAATGTAATTTAATTTACATCTCTGTTTTCTCTGAGTCTTCTACATGATTTTTTTTTTCTTTTTTCGTGGCTGATTCTTCTGGTTTATTTCCGAAATCATTTGTTCTTGTTTGGAATTGGTAATACAGTGGTAGGAAGGAACAAATTATTTGTGTAAATTGCTGGTGGATCTTGCTGAATTTGCAAGGCCTTAGGCCATTATTATTTTGAGTTCTTCATTTATTCATTTTATATTTTTATTTA

mRNA sequence

CAACGGGACTTTTGTATTGATCCTCCAAAAATGGGAATCTCACGCGTTTCTTCTCTCTTTGCCGCCTTTGCCATTCTCGCTGCTCATTTTCTCATCTCCATGGCGGCGGCCGTTGATTTATCTGGCGACCACAAGCTTCTCTTTGTTCCGACCACATCCGATTTCTTCAACGACAACGATTTCGGTTTCGGAATGGAGTTCCAGATGGACTCTGAGATCAATCGCCGAATTCTAGCGACTACTCGTTACATAAGCTACGGTGCTCTTAGGAGGAACAATGTTCCTTGCTCTCGACGTGGTGCTTCTTATTACAACTGCAGACCAGGCGCTCAGGCGAATCCTTACTCCCGTGGTTGCAACGCTATTACTCGCTGCCGAAGTTGATTTCGTATCACTTGATTCATTTTTGGAAGTTAGATTCGTCGTCGTACTCTATCGGTTAGTTCTTCGTGTGTTTATACTGAATATACATGTCGATCGAGTAATAAAATTCACATATATACTGATGATTGAAAATGTAATTTAATTTACATCTCTGTTTTCTCTGAGTCTTCTACATGATTTTTTTTTTCTTTTTTCGTGGCTGATTCTTCTGGTTTATTTCCGAAATCATTTGTTCTTGTTTGGAATTGGTAATACAGTGGTAGGAAGGAACAAATTATTTGTGTAAATTGCTGGTGGATCTTGCTGAATTTGCAAGGCCTTAGGCCATTATTATTTTGAGTTCTTCATTTATTCATTTTATATTTTTATTTA

Coding sequence (CDS)

ATGGGAATCTCACGCGTTTCTTCTCTCTTTGCCGCCTTTGCCATTCTCGCTGCTCATTTTCTCATCTCCATGGCGGCGGCCGTTGATTTATCTGGCGACCACAAGCTTCTCTTTGTTCCGACCACATCCGATTTCTTCAACGACAACGATTTCGGTTTCGGAATGGAGTTCCAGATGGACTCTGAGATCAATCGCCGAATTCTAGCGACTACTCGTTACATAAGCTACGGTGCTCTTAGGAGGAACAATGTTCCTTGCTCTCGACGTGGTGCTTCTTATTACAACTGCAGACCAGGCGCTCAGGCGAATCCTTACTCCCGTGGTTGCAACGCTATTACTCGCTGCCGAAGTTGA

Protein sequence

MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDNDFGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCRS

Homology

[Close]

BLAST of PI0016554 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.2e-26
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 54  GMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAIT 113
           G EF+MDSEINRRILAT RYISYGALRRN +PCSRRGASYYNCR GAQANPYSRGC+AIT
Sbjct: 74  GEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAIT 133

Query: 114 RCR 117
           RCR
Sbjct: 134 RCR 136

[Close]

BLAST of PI0016554 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26
Identity = 71/108 (65.74%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 14  AILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDNDFGFGM-----EFQMDSEINRRIL 73
           AIL  HFL + A     SGD    FVP  S   N       +     EF+MDSEINRRIL
Sbjct: 14  AILTVHFLFA-AVTSQSSGD----FVPIESK-CNGTIAECSLSTAEEEFEMDSEINRRIL 73

Query: 74  ATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCR 117
           ATT+YISYGALRRN VPCSRRGASYYNCR GAQANPYSRGC+AITRCR
Sbjct: 74  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of PI0016554 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.4e-25
Identity = 66/107 (61.68%), Postives = 79/107 (73.83%), Query Frame = 0


Query: 15  ILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDNDFGFGM----EFQMDSEINRRILAT 74
           +L   F ISMAAA D SG +  + +P  S        G  +    EF++DSE NRRILAT
Sbjct: 11  VLIGAFFISMAAAGD-SGAYDWV-MPARSGGGCKGSIGECIAEEEEFELDSESNRRILAT 70

Query: 75  TRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCRS 118
            +YISYGAL++N+VPCSRRGASYYNC+PGAQANPYSRGC+AITRCRS
Sbjct: 71  KKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of PI0016554 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 8.2e-23
Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 56  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRC 115
           E +MDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPYSRGC+ I RC
Sbjct: 59  EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARC 118

Query: 116 RS 118
           RS
Sbjct: 119 RS 120

[Close]

BLAST of PI0016554 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 6.9e-22
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 56  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRC 115
           E + DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNC+ GAQANPYSRGC+ ITRC
Sbjct: 58  EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRC 117

Query: 116 R 117
           R
Sbjct: 118 R 118

[Close]

BLAST of PI0016554 vs. ExPASy TrEMBL
Match: A0A1S3C7V8 (protein RALF-like 33 OS=Cucumis melo OX=3656 GN=LOC103497855 PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 1.3e-52
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MGISRV-SSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDN-DFGFGMEFQ 60
           MGISRV SSL AAF I+AAHFL+SMAAAVD SGDHKLLFVPTTSDFFNDN DFGFGMEFQ
Sbjct: 1   MGISRVSSSLLAAFLIIAAHFLVSMAAAVDFSGDHKLLFVPTTSDFFNDNDDFGFGMEFQ 60

Query: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCRS 118
           MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGC+AITRCRS
Sbjct: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of PI0016554 vs. ExPASy TrEMBL
Match: A0A0A0KBU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194150 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 4.3e-51
Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDN-DFGFGMEFQM 60
           MGISRVSSL A F ILA HF+ SMAAAVD SGDH+LLFVPTTSDFF+DN DFGFGMEFQM
Sbjct: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM 60

Query: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCRS 118
           DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGC+AITRCRS
Sbjct: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 118

[Close]

BLAST of PI0016554 vs. ExPASy TrEMBL
Match: A0A6J1H3W7 (protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 1.3e-44
Identity = 97/127 (76.38%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSD----------FFNDND 60
           MGISRVS+L AAFA+LAAHFLI  AAA+D SGD+++LF PT S+            ND+D
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCN 118
            GFGMEF+MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGC+
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

[Close]

BLAST of PI0016554 vs. ExPASy TrEMBL
Match: A0A6J1KVY0 (protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 8.8e-44
Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSD----------FFNDND 60
           MGISRVS+L AAFA+LAAHFLIS A A+D SGD+++LF PT S+            N +D
Sbjct: 1   MGISRVSALIAAFAVLAAHFLISSATAIDFSGDNEILFAPTKSECRGSITECFLAGNYDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCN 118
            GFGMEF+MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGC+
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

[Close]

BLAST of PI0016554 vs. ExPASy TrEMBL
Match: A0A6J1C9N4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 5.9e-40
Identity = 90/125 (72.00%), Postives = 100/125 (80.00%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSD--------FFNDNDFG 60
           M ISRVSSL AAFAI AAH L+S A A D SGDHKLL+VP  S+            +D G
Sbjct: 1   MEISRVSSLLAAFAIFAAHLLLSSATAADFSGDHKLLYVPAKSECRGSIAECLLAGDDSG 60

Query: 61  FGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAI 118
           FG EF+MDSEINRRILAT RYISYGAL+RN+VPCSRRGASYYNC+PGAQANPY+RGC+AI
Sbjct: 61  FGTEFEMDSEINRRILATMRYISYGALKRNSVPCSRRGASYYNCQPGAQANPYNRGCSAI 120

[Close]

BLAST of PI0016554 vs. NCBI nr
Match: XP_008458453.1 (PREDICTED: protein RALF-like 33 [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 2.8e-52
Identity = 111/119 (93.28%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MGISRV-SSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDN-DFGFGMEFQ 60
           MGISRV SSL AAF I+AAHFL+SMAAAVD SGDHKLLFVPTTSDFFNDN DFGFGMEFQ
Sbjct: 1   MGISRVSSSLLAAFLIIAAHFLVSMAAAVDFSGDHKLLFVPTTSDFFNDNDDFGFGMEFQ 60

Query: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCRS 118
           MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGC+AITRCRS
Sbjct: 61  MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCSAITRCRS 119

[Close]

BLAST of PI0016554 vs. NCBI nr
Match: XP_004143090.1 (protein RALF-like 33 [Cucumis sativus] >KGN47180.1 hypothetical protein Csa_020637 [Cucumis sativus])

HSP 1 Score: 210.3 bits (534), Expect = 8.9e-51
Identity = 106/118 (89.83%), Postives = 111/118 (94.07%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDN-DFGFGMEFQM 60
           MGISRVSSL A F ILA HF+ SMAAAVD SGDH+LLFVPTTSDFF+DN DFGFGMEFQM
Sbjct: 1   MGISRVSSLLAVFLILAPHFVFSMAAAVDFSGDHELLFVPTTSDFFDDNDDFGFGMEFQM 60

Query: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCRS 118
           DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGC+AITRCRS
Sbjct: 61  DSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCSAITRCRS 118

[Close]

BLAST of PI0016554 vs. NCBI nr
Match: XP_038875155.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 1.1e-45
Identity = 103/127 (81.10%), Postives = 106/127 (83.46%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSD----------FFNDND 60
           MGISRVSSL AA AILAAHFLIS A AVD SGDHKLLFVPT S+            ND+D
Sbjct: 1   MGISRVSSLLAAVAILAAHFLISSATAVDFSGDHKLLFVPTKSECRGSIAECFLAGNDDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCN 118
             FGMEF MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGCN
Sbjct: 61  SAFGMEFVMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCN 120

[Close]

BLAST of PI0016554 vs. NCBI nr
Match: XP_022959207.1 (protein RALF-like 33 [Cucurbita moschata])

HSP 1 Score: 188.7 bits (478), Expect = 2.8e-44
Identity = 97/127 (76.38%), Postives = 108/127 (85.04%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSD----------FFNDND 60
           MGISRVS+L AAFA+LAAHFLI  AAA+D SGD+++LF PT S+            ND+D
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSAAAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCN 118
            GFGMEF+MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGC+
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

[Close]

BLAST of PI0016554 vs. NCBI nr
Match: KAG6575064.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.2 bits (474), Expect = 8.1e-44
Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 0


Query: 1   MGISRVSSLFAAFAILAAHFLISMAAAVDLSGDHKLLFVPTTSD----------FFNDND 60
           MGISRVS+L AAFA+LAAHFLI  A A+D SGD+++LF PT S+            ND+D
Sbjct: 1   MGISRVSALIAAFAVLAAHFLILSATAIDFSGDNEILFAPTKSECRGSIAECFLAGNDDD 60

Query: 61  FGFGMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCN 118
            GFGMEF+MDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPY+RGC+
Sbjct: 61  SGFGMEFEMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYTRGCS 120

[Close]

BLAST of PI0016554 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 120.6 bits (301), Expect = 8.7e-28
Identity = 56/63 (88.89%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 54  GMEFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAIT 113
           G EF+MDSEINRRILAT RYISYGALRRN +PCSRRGASYYNCR GAQANPYSRGC+AIT
Sbjct: 74  GEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSRGCSAIT 133

Query: 114 RCR 117
           RCR
Sbjct: 134 RCR 136

[Close]

BLAST of PI0016554 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 119.8 bits (299), Expect = 1.5e-27
Identity = 71/108 (65.74%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 14  AILAAHFLISMAAAVDLSGDHKLLFVPTTSDFFNDNDFGFGM-----EFQMDSEINRRIL 73
           AIL  HFL + A     SGD    FVP  S   N       +     EF+MDSEINRRIL
Sbjct: 14  AILTVHFLFA-AVTSQSSGD----FVPIESK-CNGTIAECSLSTAEEEFEMDSEINRRIL 73

Query: 74  ATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRCR 117
           ATT+YISYGALRRN VPCSRRGASYYNCR GAQANPYSRGC+AITRCR
Sbjct: 74  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of PI0016554 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 107.8 bits (268), Expect = 5.8e-24
Identity = 50/62 (80.65%), Postives = 57/62 (91.94%), Query Frame = 0


Query: 56  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRC 115
           E +MDSEINRRILATT+YISY +L+RN+VPCSRRGASYYNC+ GAQANPYSRGC+ I RC
Sbjct: 59  EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGASYYNCQNGAQANPYSRGCSKIARC 118

Query: 116 RS 118
           RS
Sbjct: 119 RS 120

[Close]

BLAST of PI0016554 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 104.8 bits (260), Expect = 4.9e-23
Identity = 47/61 (77.05%), Postives = 55/61 (90.16%), Query Frame = 0


Query: 56  EFQMDSEINRRILATTRYISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAITRC 115
           E + DS+I+RRILA  +YISYGA+RRN+VPCSRRGASYYNC+ GAQANPYSRGC+ ITRC
Sbjct: 58  EMEFDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRC 117

Query: 116 R 117
           R
Sbjct: 118 R 118

[Close]

BLAST of PI0016554 vs. TAIR 10
Match: AT2G33775.1 (ralf-like 19 )

HSP 1 Score: 87.8 bits (216), Expect = 6.2e-18
Identity = 41/62 (66.13%), Postives = 49/62 (79.03%), Query Frame = 0


Query: 55  MEFQMDSEINRRILATTR-YISYGALRRNNVPCSRRGASYYNCRPGAQANPYSRGCNAIT 114
           +++ MDSE NRR LA  R YISYGALR+NNVPCSRRG SYY+C+   +ANPY RGC+ IT
Sbjct: 44  LDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCSVIT 103

Query: 115 RC 116
            C
Sbjct: 104 HC 105

The following BLAST results are available for this feature:

BLAST of PI0016554 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUS7	1.2e-26	88.89	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]
Q8L9P8	2.1e-26	65.74	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q945T0	1.4e-25	61.68	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	8.2e-23	80.65	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q9MA62	6.9e-22	77.05	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]

BLAST of PI0016554 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C7V8	1.3e-52	93.28	protein RALF-like 33 OS=Cucumis melo OX=3656 GN=LOC103497855 PE=3 SV=1	[more]
A0A0A0KBU7	4.3e-51	89.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G194150 PE=3 SV=1	[more]
A0A6J1H3W7	1.3e-44	76.38	protein RALF-like 33 OS=Cucurbita moschata OX=3662 GN=LOC111460267 PE=3 SV=1	[more]
A0A6J1KVY0	8.8e-44	75.59	protein RALF-like 33 OS=Cucurbita maxima OX=3661 GN=LOC111499183 PE=3 SV=1	[more]
A0A6J1C9N4	5.9e-40	72.00	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111009595 PE=3 SV=1	[more]

BLAST of PI0016554 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008458453.1	2.8e-52	93.28	PREDICTED: protein RALF-like 33 [Cucumis melo]	[more]
XP_004143090.1	8.9e-51	89.83	protein RALF-like 33 [Cucumis sativus] >KGN47180.1 hypothetical protein Csa_0206...	[more]
XP_038875155.1	1.1e-45	81.10	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022959207.1	2.8e-44	76.38	protein RALF-like 33 [Cucurbita moschata]	[more]
KAG6575064.1	8.1e-44	75.59	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of PI0016554 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16570.1	8.7e-28	88.89	rapid alkalinization factor 23	[more]
AT4G15800.1	1.5e-27	65.74	ralf-like 33	[more]
AT1G02900.1	5.8e-24	80.65	rapid alkalinization factor 1	[more]
AT3G05490.1	4.9e-23	77.05	ralf-like 22	[more]
AT2G33775.1	6.2e-18	66.13	ralf-like 19	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (PI 482460) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 56..116 e-value: 4.0E-30 score: 104.6
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 7..117
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 7..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
PI0016554.1	PI0016554.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region